RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 TTC22Q5TAA0 569 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 FAM109BQ6ICB4 259 aaPredicted RBP10.43□□□□□ -0.74
COPB1-211ENST00000534234 CXCL17Q6UXB2 119 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 ENAHQ8N8S7 591 aaPredicted RBP10.43□□□□□ -0.74
COPB1-211ENST00000534234 SLC17A8Q8NDX2 589 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 IL25Q9H293 177 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 CNNM2Q9H8M5 875 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 WDR19Q8NEZ3 1342 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 FRMPD3Q5JV73 1810 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 ZNFX1Q9P2E3 1918 aaKnown RBP10.43□□□□□ -0.74
COPB1-211ENST00000534234 MYH4Q9Y623 1939 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 ZEB2O60315 1214 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 FPGSQ05932 587 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 USH1GQ495M9 461 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 DUSP28Q4G0W2 176 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 SLC30A10Q6XR72 485 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 UBAC1Q9BSL1 405 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 WDR11Q9BZH6 1224 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 TBX21Q9UL17 535 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 STXBP5LQ9Y2K9 1186 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 TNKSO95271 1327 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 DNAH12Q6ZR08 3092 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 TLR3O15455 904 aaKnown RBP10.42□□□□□ -0.74
COPB1-211ENST00000534234 PARP1P09874 1014 aaKnown RBP10.42□□□□□ -0.74
COPB1-211ENST00000534234 PDE4DQ08499 809 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 ASPRV1Q53RT3 343 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 MFSD5Q6N075 450 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 FAM126BQ8IXS8 530 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 ADGRF4Q8IZF3 695 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 SLC43A3Q8NBI5 491 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 RGS22Q8NE09 1264 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 DNERQ8NFT8 737 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 RUFY2Q8WXA3 655 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 RNPC3Q96LT9 517 aaKnown RBP10.42□□□□□ -0.74
COPB1-211ENST00000534234 FAM161BQ96MY7 647 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 MPHOSPH6Q99547 160 aaKnown RBP10.42□□□□□ -0.74
COPB1-211ENST00000534234 VAT1LQ9HCJ6 419 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 SMCHD1A6NHR9 2005 aa10.42□□□□□ -0.74
COPB1-211ENST00000534234 RBM47A0AV96 593 aaKnown RBP10.41□□□□□ -0.74
COPB1-211ENST00000534234 B4DLN1 442 aa10.41□□□□□ -0.74
COPB1-211ENST00000534234 DHX16O60231 1041 aaKnown RBP10.41□□□□□ -0.74
COPB1-211ENST00000534234 CHMLP26374 656 aa10.41□□□□□ -0.74
COPB1-211ENST00000534234 MRPL12P52815 198 aaKnown RBP10.41□□□□□ -0.74
COPB1-211ENST00000534234 SMAD3P84022 425 aaKnown RBP10.41□□□□□ -0.74
COPB1-211ENST00000534234 TRDNQ13061 729 aa10.41□□□□□ -0.74
COPB1-211ENST00000534234 ITGA7Q13683 1181 aa10.41□□□□□ -0.74
COPB1-211ENST00000534234 CDC37Q16543 378 aaPredicted RBP10.41□□□□□ -0.74
COPB1-211ENST00000534234 IFIT1BQ5T764 474 aaKnown RBP10.41□□□□□ -0.74
COPB1-211ENST00000534234 ZNF697Q5TEC3 545 aa10.41□□□□□ -0.74
COPB1-211ENST00000534234 TBC1D5Q92609 795 aa10.41□□□□□ -0.74
COPB1-211ENST00000534234 SEZ6LQ9BYH1 1024 aa10.41□□□□□ -0.74
COPB1-211ENST00000534234 GRIN2DO15399 1336 aa10.41□□□□□ -0.74
COPB1-211ENST00000534234 CD4P01730 458 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 EDNRBP24530 442 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 PSMC6P62333 389 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 PTH1RQ03431 593 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 CYB5R4Q7L1T6 521 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 C16orf59Q7L2K0 433 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 TMEM199Q8N511 208 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 PPP1R12CQ9BZL4 782 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 MAF1Q9H063 256 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 SEMA6BQ9H3T3 888 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 JMJD4Q9H9V9 463 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 ABCB11O95342 1321 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 RAD50Q92878 1312 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 PLXNA1Q9UIW2 1896 aa10.4□□□□□ -0.74
COPB1-211ENST00000534234 CYP21A2P08686 494 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 CSF2RAP15509 400 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 CYP2C18P33260 490 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 CPT1AP50416 773 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 PPIGQ13427 754 aaKnown RBP eCLIP10.39□□□□□ -0.751e-7■□□□□ 11.1
COPB1-211ENST00000534234 SEC23AQ15436 765 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 QRICH1Q2TAL8 776 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 BRDTQ58F21 947 aaPredicted RBP10.39□□□□□ -0.75
COPB1-211ENST00000534234 FBXO11Q86XK2 927 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 MCF2L2Q86YR7 1114 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 SCFD2Q8WU76 684 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 GUCD1Q96NT3 240 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 TAAR1Q96RJ0 339 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.39□□□□□ -0.755e-7■■□□□ 14
COPB1-211ENST00000534234 TRPV6Q9H1D0 765 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 GPHNQ9NQX3 736 aaPredicted RBP10.39□□□□□ -0.75
COPB1-211ENST00000534234 POLR3EQ9NVU0 708 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 MRPL11Q9Y3B7 192 aaKnown RBP10.39□□□□□ -0.75
COPB1-211ENST00000534234 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.39□□□□□ -0.75
COPB1-211ENST00000534234 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.39□□□□□ -0.75
COPB1-211ENST00000534234 KLRF2D3W0D1 207 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 NKRFO15226 690 aaKnown RBP eCLIP10.39□□□□□ -0.75
COPB1-211ENST00000534234 MYL3P08590 195 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 ACRP10323 421 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 TXNP10599 105 aaKnown RBP10.39□□□□□ -0.75
COPB1-211ENST00000534234 PPP2R5BQ15173 497 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 TMEM240Q5SV17 173 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 OR6J1Q8NGC5 347 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 SYTL5Q8TDW5 730 aaPredicted RBP10.39□□□□□ -0.75
COPB1-211ENST00000534234 NSUN6Q8TEA1 469 aaKnown RBP10.39□□□□□ -0.75
COPB1-211ENST00000534234 HIPK3Q9H422 1215 aa10.39□□□□□ -0.75
COPB1-211ENST00000534234 PALM3A6NDB9 673 aaPredicted RBP10.38□□□□□ -0.75
COPB1-211ENST00000534234 A6NJR5 290 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms