RNA–Protein interactions for RNA: ENST00000533928.1

USP33-218, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-218ENST00000533928 PLCB3Q01970 1234 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 SLC39A6Q13433 755 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 ZNF124Q15973 351 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 NXPE4Q6UWF7 544 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 MCM10Q7L590 875 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 PDZD3Q86UT5 571 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 SULF2Q8IWU5 870 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 STK35Q8TDR2 534 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 ZNF428Q96B54 188 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 HRASLS5Q96KN8 279 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 MKNK2Q9HBH9 465 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 TSPYL4Q9UJ04 414 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 AKAP2Q9Y2D5 859 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 SBF1O95248 1867 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 N4BP2Q86UW6 1770 aaPredicted RBP5.47□□□□□ -1.53
USP33-218ENST00000533928 MAP3K15Q6ZN16 1313 aa5.47□□□□□ -1.53
USP33-218ENST00000533928 TMEM265A0A087WTH1 108 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 FARP2O94887 1054 aaPredicted RBP5.46□□□□□ -1.54
USP33-218ENST00000533928 ZNF853P0CG23 659 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 YY1P25490 414 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 ARNTP27540 789 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 NFIXQ14938 502 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 GPR162Q16538 588 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 STYK1Q6J9G0 422 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 TPTE2Q6XPS3 522 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 KIF6Q6ZMV9 814 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 TMC4Q7Z404 712 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 AMIGO3Q86WK7 504 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 WDR63Q8IWG1 891 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.46□□□□□ -1.54
USP33-218ENST00000533928 CNBD1Q8NA66 436 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 LRRN4CLQ8ND94 238 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 FAM168AQ92567 244 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 ISL2Q96A47 359 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 SETDB2Q96T68 719 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 VPS33BQ9H267 617 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 DDX21Q9NR30 783 aaKnown RBP eCLIP5.46□□□□□ -1.54
USP33-218ENST00000533928 DBF4Q9UBU7 674 aaPredicted RBP5.46□□□□□ -1.54
USP33-218ENST00000533928 PLAGL2Q9UPG8 496 aa5.46□□□□□ -1.54
USP33-218ENST00000533928 COL11A2P13942 1736 aaPredicted RBP5.45□□□□□ -1.54
USP33-218ENST00000533928 MYH3P11055 1940 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 CCER2I3L3R5 266 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 SERPINB2P05120 415 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 CEACAM5P06731 702 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 MAPK8P45983 427 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 DDR1Q08345 913 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 CRY2Q49AN0 593 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 ZC3H12AQ5D1E8 599 aaKnown RBP5.45□□□□□ -1.54
USP33-218ENST00000533928 PPP1R42Q7Z4L9 355 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 TOP6BLQ8N6T0 577 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 TMEM40Q8WWA1 233 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 HYPKQ9NX55 129 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 USP16Q9Y5T5 823 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 IVNS1ABPQ9Y6Y0 642 aa5.45□□□□□ -1.54
USP33-218ENST00000533928 LRRC37AA6NMS7 1700 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 H0YIN7 160 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 DDX58O95786 925 aaKnown RBP5.44□□□□□ -1.54
USP33-218ENST00000533928 CT47B1P0C2W7 299 aaPredicted RBP5.44□□□□□ -1.54
USP33-218ENST00000533928 ITIH2P19823 946 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 CANXP27824 592 aaKnown RBP5.44□□□□□ -1.54
USP33-218ENST00000533928 ALDH1B1P30837 517 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 DALRD3Q5D0E6 543 aaKnown RBP5.44□□□□□ -1.54
USP33-218ENST00000533928 ANGEL2Q5VTE6 544 aaKnown RBP5.44□□□□□ -1.54
USP33-218ENST00000533928 MAP1SQ66K74 1059 aaPredicted RBP5.44□□□□□ -1.54
USP33-218ENST00000533928 LRP10Q7Z4F1 713 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 TIAM2Q8IVF5 1701 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 DDX60Q8IY21 1712 aaKnown RBP5.44□□□□□ -1.54
USP33-218ENST00000533928 TTLL6Q8N841 843 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 RNF214Q8ND24 703 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 C3orf58Q8NDZ4 430 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 MASTLQ96GX5 879 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 HEXIM2Q96MH2 286 aaKnown RBP5.44□□□□□ -1.54
USP33-218ENST00000533928 EMILIN2Q9BXX0 1053 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 SCN4AP35499 1836 aa5.44□□□□□ -1.54
USP33-218ENST00000533928 DBX1A6NMT0 343 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 A1BGP04217 495 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 SRGNP10124 158 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 NPR1P16066 1061 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 NME2P22392 152 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 ERVK-24P63145 666 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 FMR1Q06787 632 aaKnown RBP eCLIP5.43□□□□□ -1.54
USP33-218ENST00000533928 PKN1Q16512 942 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 CCDC30Q5VVM6 783 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 PRR5LQ6MZQ0 368 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 SLC23A3Q6PIS1 610 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 NBPF5PQ86XG9 351 aaPredicted RBP5.43□□□□□ -1.54
USP33-218ENST00000533928 KSR1Q8IVT5 923 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 NLGN2Q8NFZ4 835 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 PLBD2Q8NHP8 589 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 GPBAR1Q8TDU6 330 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 TNKS2Q9H2K2 1166 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 MYH16Q9H6N6 1097 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 CBX8Q9HC52 389 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 MRS2Q9HD23 443 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 SRP68Q9UHB9 627 aaKnown RBP5.43□□□□□ -1.54
USP33-218ENST00000533928 SNX11Q9Y5W9 270 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 WDR90Q96KV7 1748 aa5.43□□□□□ -1.54
USP33-218ENST00000533928 APAF1O14727 1248 aa5.42□□□□□ -1.54
USP33-218ENST00000533928 NPHP1O15259 732 aa5.42□□□□□ -1.54
USP33-218ENST00000533928 FBXO24O75426 580 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms