RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 UBE2OQ9C0C9 1292 aaKnown RBP6.8□□□□□ -1.32
CHKA-208ENST00000533910 MUC3BQ9H195 1237 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 DNAJB12Q9NXW2 375 aaKnown RBP6.8□□□□□ -1.32
CHKA-208ENST00000533910 PRR12Q9ULL5 1215 aa6.8□□□□□ -1.32
CHKA-208ENST00000533910 RPAP1Q9BWH6 1393 aaPredicted RBP6.8□□□□□ -1.32
CHKA-208ENST00000533910 COL1A1P02452 1464 aaPredicted RBP6.79□□□□□ -1.32
CHKA-208ENST00000533910 PNPLA7Q6ZV29 1317 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 CACNA1SQ13698 1873 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 A0A096LPE4 126 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 A0A1W2PPZ6 126 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 KLRG2A4D1S0 409 aaPredicted RBP6.79□□□□□ -1.32
CHKA-208ENST00000533910 GOLIM4O00461 696 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 OIP5O43482 229 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 ZFYP08048 801 aaPredicted RBP6.79□□□□□ -1.32
CHKA-208ENST00000533910 CPB1P15086 417 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 SOX18P35713 384 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 PHKA1P46020 1223 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 PTH1RQ03431 593 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 ARID5AQ03989 594 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 GNL2Q13823 731 aaKnown RBP6.79□□□□□ -1.32
CHKA-208ENST00000533910 UBE4AQ14139 1066 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 ZMYM1Q5SVZ6 1142 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 GORABQ5T7V8 394 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 KIAA1211Q6ZU35 1233 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 DPH6Q7L8W6 267 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 ZNF589Q86UQ0 364 aaPredicted RBP6.79□□□□□ -1.32
CHKA-208ENST00000533910 MCF2L2Q86YR7 1114 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 RELL1Q8IUW5 271 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 ANKRD13AQ8IZ07 590 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 CELF1Q92879 486 aaKnown RBP6.79□□□□□ -1.32
CHKA-208ENST00000533910 MAP4K1Q92918 833 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 EAF1Q96JC9 268 aaPredicted RBP6.79□□□□□ -1.32
CHKA-208ENST00000533910 POP1Q99575 1024 aaKnown RBP6.79□□□□□ -1.32
CHKA-208ENST00000533910 SPON2Q9BUD6 331 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 ANTXR1Q9H6X2 564 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 HELLSQ9NRZ9 838 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 CHD4Q14839 1912 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 CCDC88AQ3V6T2 1871 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 TIAM2Q8IVF5 1701 aa6.79□□□□□ -1.32
CHKA-208ENST00000533910 MAST3O60307 1309 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 PDS5AQ29RF7 1337 aaKnown RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 IRS2Q9Y4H2 1338 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 K7ELQ4 463 aaPredicted RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 PDE2AO00408 941 aaPredicted RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 RNF113AO15541 343 aaKnown RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 TAF5LO75529 589 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 PF4P02776 101 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 SERPINB2P05120 415 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 DDIT3P35638 169 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 NRLP54845 237 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 RPS8P62241 208 aaKnown RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 ST5P78524 1137 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 SETQ01105 290 aaPredicted RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 GRAPQ13588 217 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 NECTIN1Q15223 517 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 TTF1Q15361 905 aaPredicted RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 LRRFIP1Q32MZ4 808 aaKnown RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 MCMDC2Q4G0Z9 681 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 RASIP1Q5U651 963 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 COL23A1Q86Y22 540 aaPredicted RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 GRAPLQ8TC17 118 aaPredicted RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 TRPM4Q8TD43 1214 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 GPRASP2Q96D09 838 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 SPACA7Q96KW9 195 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 TMEM74Q96NL1 305 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 CAMKK2Q96RR4 588 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 GMLQ99445 158 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 RSRP1Q9BUV0 290 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 NOC4LQ9BVI4 516 aaKnown RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 PBX4Q9BYU1 374 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 ANKRD2Q9GZV1 360 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 TFCP2L1Q9NZI6 479 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 KLF15Q9UIH9 416 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 GDF2Q9UK05 429 aaPredicted RBP6.78□□□□□ -1.32
CHKA-208ENST00000533910 MINPP1Q9UNW1 487 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 SNX14Q9Y5W7 946 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 KIF13BQ9NQT8 1826 aa6.78□□□□□ -1.32
CHKA-208ENST00000533910 MSTNO14793 375 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 CHGBP05060 677 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 EIF2AK2P19525 551 aaKnown RBP6.77□□□□□ -1.33
CHKA-208ENST00000533910 HOXA10P31260 410 aaPredicted RBP6.77□□□□□ -1.33
CHKA-208ENST00000533910 EIF4A3P38919 411 aaKnown RBP6.77□□□□□ -1.33
CHKA-208ENST00000533910 MCM2P49736 904 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 GPLD1P80108 840 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 RASGRF1Q13972 1273 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 CEP135Q66GS9 1140 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 FBXL19Q6PCT2 694 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 NLGN1Q8N2Q7 840 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 TMEM102Q8N9M5 508 aaPredicted RBP6.77□□□□□ -1.33
CHKA-208ENST00000533910 SPATA5Q8NB90 893 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 PHC3Q8NDX5 983 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 ZNF296Q8WUU4 475 aaPredicted RBP6.77□□□□□ -1.33
CHKA-208ENST00000533910 APPBP2Q92624 585 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 TM6SF1Q9BZW5 370 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 HMG20BQ9P0W2 317 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 RBM8AQ9Y5S9 174 aaKnown RBP6.77□□□□□ -1.33
CHKA-208ENST00000533910 LAMB1P07942 1786 aa6.77□□□□□ -1.33
CHKA-208ENST00000533910 ZNF646O15015 1829 aaPredicted RBP6.76□□□□□ -1.33
CHKA-208ENST00000533910 M0R2C6 588 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 SNAP23O00161 211 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms