RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 ABHD10Q9NUJ1 306 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 TRMT112Q9UI30 125 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 USP32Q8NFA0 1604 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 E7EVH7 732 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 PARP1P09874 1014 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 OR52Z1P0C646 297 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 STX2P32856 288 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 MDH1P40925 334 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 RAB15P59190 212 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 KRT31Q15323 416 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 ASIC2Q16515 512 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 DENND2CQ68D51 928 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 PROSER2Q86WR7 435 aaPredicted RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 RIBC1Q8N443 379 aaPredicted RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 ATL2Q8NHH9 583 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 CENPTQ96BT3 561 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 CARD9Q9H257 536 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 BICC1Q9H694 974 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 RABGAP1Q9Y3P9 1069 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 ZNF330Q9Y3S2 320 aaPredicted RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 BTBD18B2RXH4 712 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 CALUO43852 315 aaPredicted RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 GCP02774 474 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 PPP2R2AP63151 447 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 CAPRIN2Q6IMN6 1127 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 BLIDQ8IZY5 108 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 MB21D1Q8N884 522 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 GBP5Q96PP8 586 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 MKNK1Q9BUB5 465 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 CNOT7Q9UIV1 285 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 EXOC7Q9UPT5 735 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 ATP6V0A2Q9Y487 856 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 SLC4A4Q9Y6R1 1079 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 POTEFA5A3E0 1075 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 TRAF5O00463 557 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 RANBP6O60518 1105 aaKnown RBP4.44□□□□□ -1.7
SOX6-217ENST00000533870 RHOBTB3O94955 611 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 POTEIP0CG38 1075 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 STX17P56962 302 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 MYBPC2Q14324 1141 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 CCDC62Q6P9F0 684 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 TRIM65Q6PJ69 517 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 POTEEQ6S8J3 1075 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 MPRIPQ6WCQ1 1025 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 NME8Q8N427 588 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 APBB2Q92870 758 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 CUL5Q93034 780 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 MCUR1Q96AQ8 359 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 TTC25Q96NG3 672 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 NDST4Q9H3R1 872 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 MAN1B1Q9UKM7 699 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 LRRC7Q96NW7 1537 aa4.44□□□□□ -1.7
SOX6-217ENST00000533870 CTNND1O60716 968 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 RPN1P04843 607 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 PPP2R5AQ15172 486 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 PTGISQ16647 500 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 CWF19L2Q2TBE0 894 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 COBLL1Q53SF7 1204 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ESCO1Q5FWF5 840 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 EMC10Q5UCC4 262 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ALKBH8Q96BT7 664 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 XAGE2Q96GT9 111 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SCLT1Q96NL6 688 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 MKNK2Q9HBH9 465 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 TMOD3Q9NYL9 352 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 MIS18AQ9NYP9 233 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 AIPL1Q9NZN9 384 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 HPCAL4Q9UM19 191 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SMG5Q9UPR3 1016 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 RIPOR2Q9Y4F9 1068 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ADGRB2O60241 1585 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 AGLP35573 1532 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 PDE8AO60658 829 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SEC31AO94979 1220 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 FGAP02671 866 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SRGNP10124 158 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 BCRP11274 1271 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 MATR3P43243 847 aaKnown RBP eCLIP4.43□□□□□ -1.7
SOX6-217ENST00000533870 MMP14P50281 582 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 TRAPPC11Q7Z392 1133 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 PARP9Q8IXQ6 854 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SPATA4Q8NEY3 305 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 KIFAP3Q92845 792 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 DESI2Q9BSY9 194 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 TMEM109Q9BVC6 243 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SYNGAP1Q96PV0 1343 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ANKRD62A6NC57 917 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 RASGRF2O14827 1237 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SERPING1P05155 500 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ADKP55263 362 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 ITIH4Q14624 930 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 PREPLQ4J6C6 727 aaPredicted RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 GABPB2Q8TAK5 448 aaPredicted RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 DDX54Q8TDD1 881 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 TBC1D22AQ8WUA7 517 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 VPS16Q9H269 839 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 CABP5Q9NP86 173 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ANGPTL2Q9UKU9 493 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ACTL7BQ9Y614 415 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ARHGAP10A1A4S6 786 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms