RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 P2RX5Q93086 422 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 THAP9Q9H5L6 903 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 KBTBD4Q9NVX7 518 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 ABCA3Q99758 1704 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 RHOBTB3O94955 611 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 SRGNP10124 158 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 CYLC1P35663 651 aaPredicted RBP21.55■■□□□ 1.04
CAPN1-226ENST00000533820 KRT83P78385 493 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 SATB1Q01826 763 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 SF3B3Q15393 1217 aaKnown RBP21.55■■□□□ 1.04
CAPN1-226ENST00000533820 EZH2Q15910 746 aaKnown RBP21.55■■□□□ 1.04
CAPN1-226ENST00000533820 USP17L2Q6R6M4 530 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 MLXIPQ9HAP2 919 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 EHD2Q9NZN4 543 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 NHSL1Q5SYE7 1610 aa21.55■■□□□ 1.04
CAPN1-226ENST00000533820 TXKP42681 527 aa21.54■■□□□ 1.04
CAPN1-226ENST00000533820 KLRF2D3W0D1 207 aa21.54■■□□□ 1.04
CAPN1-226ENST00000533820 C2CD5Q86YS7 1000 aa21.54■■□□□ 1.04
CAPN1-226ENST00000533820 CCDC42Q96M95 316 aa21.54■■□□□ 1.04
CAPN1-226ENST00000533820 TRIM9Q9C026 710 aa21.54■■□□□ 1.04
CAPN1-226ENST00000533820 MMRN2Q9H8L6 949 aa21.54■■□□□ 1.04
CAPN1-226ENST00000533820 BIN2Q9UBW5 565 aaPredicted RBP21.54■■□□□ 1.04
CAPN1-226ENST00000533820 NUTM2BA6NNL0 878 aaPredicted RBP21.54■■□□□ 1.04
CAPN1-226ENST00000533820 NUTM2EB1AL46 878 aaPredicted RBP21.54■■□□□ 1.04
CAPN1-226ENST00000533820 STXBP3O00186 592 aa21.54■■□□□ 1.04
CAPN1-226ENST00000533820 EPHB6O15197 1021 aa21.54■■□□□ 1.04
CAPN1-226ENST00000533820 C12orf60Q5U649 245 aa21.54■■□□□ 1.04
CAPN1-226ENST00000533820 NBPF5PQ86XG9 351 aaPredicted RBP21.54■■□□□ 1.04
CAPN1-226ENST00000533820 TMEM47Q9BQJ4 181 aa21.54■■□□□ 1.04
CAPN1-226ENST00000533820 A0A1W2PQC6 194 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 LINC00116Q8NCU8 138 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 UBA5Q9GZZ9 404 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 ANKIB1Q9P2G1 1089 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 ZNF263O14978 683 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 SLC7A5Q01650 507 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 KIF5AQ12840 1032 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 CCDC91Q7Z6B0 441 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 FAM71BQ8TC56 605 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 HDAC7Q8WUI4 952 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 NLRP3Q96P20 1036 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 TMEM260Q9NX78 707 aa21.53■■□□□ 1.04
CAPN1-226ENST00000533820 KCNB1Q14721 858 aa21.52■■□□□ 1.04
CAPN1-226ENST00000533820 GRM4Q14833 912 aa21.52■■□□□ 1.04
CAPN1-226ENST00000533820 WDR93Q6P2C0 686 aa21.52■■□□□ 1.04
CAPN1-226ENST00000533820 PTF1AQ7RTS3 328 aa21.52■■□□□ 1.04
CAPN1-226ENST00000533820 RNF217Q8TC41 542 aa21.52■■□□□ 1.04
CAPN1-226ENST00000533820 PSD3Q9NYI0 1048 aa21.52■■□□□ 1.04
CAPN1-226ENST00000533820 CAPN6Q9Y6Q1 641 aa21.52■■□□□ 1.04
CAPN1-226ENST00000533820 SMCO2A6NFE2 343 aa21.52■■□□□ 1.03
CAPN1-226ENST00000533820 M0R2N6 131 aa21.52■■□□□ 1.03
CAPN1-226ENST00000533820 IRF6O14896 467 aa21.52■■□□□ 1.03
CAPN1-226ENST00000533820 MOCS3O95396 460 aa21.52■■□□□ 1.03
CAPN1-226ENST00000533820 OR52Z1P0C646 297 aa21.52■■□□□ 1.03
CAPN1-226ENST00000533820 CCNE1P24864 410 aa21.52■■□□□ 1.03
CAPN1-226ENST00000533820 SPA17Q15506 151 aa21.52■■□□□ 1.03
CAPN1-226ENST00000533820 CCDC155Q8N6L0 562 aa21.52■■□□□ 1.03
CAPN1-226ENST00000533820 COG1Q8WTW3 980 aa21.52■■□□□ 1.03
CAPN1-226ENST00000533820 ACBD3Q9H3P7 528 aa21.52■■□□□ 1.03
CAPN1-226ENST00000533820 BARHL2Q9NY43 387 aa21.52■■□□□ 1.03
CAPN1-226ENST00000533820 SYF2O95926 243 aaKnown RBP21.51■■□□□ 1.03
CAPN1-226ENST00000533820 GGCXP38435 758 aa21.51■■□□□ 1.03
CAPN1-226ENST00000533820 LRRC41Q15345 812 aa21.51■■□□□ 1.03
CAPN1-226ENST00000533820 DGKHQ86XP1 1220 aa21.51■■□□□ 1.03
CAPN1-226ENST00000533820 CCSER1Q9C0I3 900 aa21.51■■□□□ 1.03
CAPN1-226ENST00000533820 HPCAL4Q9UM19 191 aa21.51■■□□□ 1.03
CAPN1-226ENST00000533820 MYH10P35580 1976 aa21.51■■□□□ 1.03
CAPN1-226ENST00000533820 ZPR1O75312 459 aa21.51■■□□□ 1.03
CAPN1-226ENST00000533820 LDHBP07195 334 aaKnown RBP21.51■■□□□ 1.03
CAPN1-226ENST00000533820 ZBED6P86452 979 aa21.51■■□□□ 1.03
CAPN1-226ENST00000533820 MIIPQ5JXC2 388 aa21.51■■□□□ 1.03
CAPN1-226ENST00000533820 CCDC47Q96A33 483 aaKnown RBP21.51■■□□□ 1.03
CAPN1-226ENST00000533820 CRACR2AQ9BSW2 395 aa21.51■■□□□ 1.03
CAPN1-226ENST00000533820 TUBB4BP68371 445 aa21.5■■□□□ 1.03
CAPN1-226ENST00000533820 ENOX2Q16206 610 aaKnown RBP21.5■■□□□ 1.03
CAPN1-226ENST00000533820 SBK1Q52WX2 424 aa21.5■■□□□ 1.03
CAPN1-226ENST00000533820 PAPD7Q5XG87 772 aaKnown RBP21.5■■□□□ 1.03
CAPN1-226ENST00000533820 POTEDQ86YR6 584 aa21.5■■□□□ 1.03
CAPN1-226ENST00000533820 DHTKD1Q96HY7 919 aaPredicted RBP21.5■■□□□ 1.03
CAPN1-226ENST00000533820 TTYH3Q9C0H2 523 aa21.5■■□□□ 1.03
CAPN1-226ENST00000533820 DOT1LQ8TEK3 1739 aa21.5■■□□□ 1.03
CAPN1-226ENST00000533820 NCK2O43639 380 aa21.5■■□□□ 1.03
CAPN1-226ENST00000533820 KIAA0895Q8NCT3 520 aa21.5■■□□□ 1.03
CAPN1-226ENST00000533820 GJA10Q969M2 543 aa21.5■■□□□ 1.03
CAPN1-226ENST00000533820 IFIH1Q9BYX4 1025 aaKnown RBP21.5■■□□□ 1.03
CAPN1-226ENST00000533820 SEMA6BQ9H3T3 888 aa21.5■■□□□ 1.03
CAPN1-226ENST00000533820 FLT1P17948 1338 aa21.5■■□□□ 1.03
CAPN1-226ENST00000533820 NAP1L1P55209 391 aaKnown RBP21.49■■□□□ 1.03
CAPN1-226ENST00000533820 MEA1Q16626 185 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 GLIS3Q8NEA6 775 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 TBCKQ8TEA7 893 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 SELENOOQ9BVL4 669 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 AKR1B10O60218 316 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 MAGEA9P43362 315 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 SETDB2Q96T68 719 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 TANGO6Q9C0B7 1094 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 SH3GLB2Q9NR46 395 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 A0A1B0GUL6 1792 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 EIF6P56537 245 aaKnown RBP21.49■■□□□ 1.03
CAPN1-226ENST00000533820 NONOQ15233 471 aaKnown RBP eCLIP21.49■■□□□ 1.03
CAPN1-226ENST00000533820 NFRKBQ6P4R8 1299 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms