RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 TCTN1Q2MV58 587 aa14.72□□□□□ -0.05
SVIP-205ENST00000533774 MUM1L1Q5H9M0 696 aa14.72□□□□□ -0.05
SVIP-205ENST00000533774 ZKSCAN2Q63HK3 967 aa14.72□□□□□ -0.05
SVIP-205ENST00000533774 LRRC47Q8N1G4 583 aaKnown RBP14.72□□□□□ -0.05
SVIP-205ENST00000533774 MKL1Q969V6 931 aa14.72□□□□□ -0.05
SVIP-205ENST00000533774 PAG1Q9NWQ8 432 aa14.72□□□□□ -0.05
SVIP-205ENST00000533774 NLRC5Q86WI3 1866 aa14.72□□□□□ -0.05
SVIP-205ENST00000533774 MICAL3Q7RTP6 2002 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 SUPT20HL2P0C7V6 817 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 SNAP25P60880 206 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 NBPF20Q3BBV1 942 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 LEXMQ3ZCV2 418 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 KIAA1211Q6ZU35 1233 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 ERC1Q8IUD2 1116 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 AMOTL1Q8IY63 956 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 CHMP4CQ96CF2 233 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 CEP95Q96GE4 821 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 PHOX2BQ99453 314 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 FTOQ9C0B1 505 aaKnown RBP eCLIP14.71□□□□□ -0.05
SVIP-205ENST00000533774 BOLA2Q9H3K6 86 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 SUGCTQ9HAC7 445 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 LMCD1Q9NZU5 365 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 COG6Q9Y2V7 657 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 TECTAO75443 2155 aa14.71□□□□□ -0.05
SVIP-205ENST00000533774 USP34Q70CQ2 3546 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 KIF28PB7ZC32 967 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 MYL3P08590 195 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 KCNA5P22460 613 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 RFC2P35250 354 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 WDR5P61964 334 aaKnown RBP14.7□□□□□ -0.06
SVIP-205ENST00000533774 DEFB103AP81534 67 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 DUSP28Q4G0W2 176 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 ITPRIPQ8IWB1 547 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 MORC4Q8TE76 937 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 TRERF1Q96PN7 1200 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 CTAGE1Q96RT6 745 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 CYP39A1Q9NYL5 469 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 MTUS1Q9ULD2 1270 aa14.7□□□□□ -0.06
SVIP-205ENST00000533774 POTEB3A0JP26 581 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 GSG1L2A8MUP6 293 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 TMEM232C9JQI7 657 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 PRDM1O75626 825 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 BMP3P12645 472 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 ALAS1P13196 640 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 SSTR3P32745 418 aaPredicted RBP14.69□□□□□ -0.06
SVIP-205ENST00000533774 UBE3CQ15386 1083 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 SBK1Q52WX2 424 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 SLFN13Q68D06 897 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 POTEBQ6S5H4 581 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 GMCL1P1Q8NEA9 526 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 BCL11AQ9H165 835 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 MKNK2Q9HBH9 465 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 VTA1Q9NP79 307 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 POLR3EQ9NVU0 708 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 MTMR4Q9NYA4 1195 aa14.69□□□□□ -0.06
SVIP-205ENST00000533774 ARPP21Q9UBL0 812 aaPredicted RBP14.69□□□□□ -0.06
SVIP-205ENST00000533774 MYH7BA7E2Y1 1941 aa14.68□□□□□ -0.06
SVIP-205ENST00000533774 GRXCR2A6NFK2 248 aa14.68□□□□□ -0.06
SVIP-205ENST00000533774 ERVK-21P61565 698 aa14.68□□□□□ -0.06
SVIP-205ENST00000533774 FAM47CQ5HY64 1035 aa14.68□□□□□ -0.06
SVIP-205ENST00000533774 PTCRAQ6ISU1 281 aaPredicted RBP14.68□□□□□ -0.06
SVIP-205ENST00000533774 RASGRP2Q7LDG7 609 aa14.68□□□□□ -0.06
SVIP-205ENST00000533774 STRBPQ96SI9 672 aaKnown RBP14.68□□□□□ -0.06
SVIP-205ENST00000533774 MTG1Q9BT17 334 aaPredicted RBP14.68□□□□□ -0.06
SVIP-205ENST00000533774 LINC01553A4QN01 128 aa14.67□□□□□ -0.06
SVIP-205ENST00000533774 ZNF316A6NFI3 1004 aaPredicted RBP14.67□□□□□ -0.06
SVIP-205ENST00000533774 MINDY4BA8MYZ0 360 aa14.67□□□□□ -0.06
SVIP-205ENST00000533774 BAIAP3O94812 1187 aa14.67□□□□□ -0.06
SVIP-205ENST00000533774 IFIT2P09913 472 aaKnown RBP14.67□□□□□ -0.06
SVIP-205ENST00000533774 ALADP13716 330 aa14.67□□□□□ -0.06
SVIP-205ENST00000533774 RPAP2Q8IXW5 612 aaPredicted RBP14.67□□□□□ -0.06
SVIP-205ENST00000533774 CLASRPQ8N2M8 674 aaKnown RBP14.67□□□□□ -0.06
SVIP-205ENST00000533774 RETREG2Q8NC44 543 aa14.67□□□□□ -0.06
SVIP-205ENST00000533774 COPS5Q92905 334 aa14.67□□□□□ -0.06
SVIP-205ENST00000533774 DDRGK1Q96HY6 314 aa14.67□□□□□ -0.06
SVIP-205ENST00000533774 HAUS7Q99871 368 aa14.67□□□□□ -0.06
SVIP-205ENST00000533774 WDR11Q9BZH6 1224 aa14.67□□□□□ -0.06
SVIP-205ENST00000533774 EPB41L4AQ9HCS5 686 aaPredicted RBP14.67□□□□□ -0.06
SVIP-205ENST00000533774 CFAP54Q96N23 3096 aa14.67□□□□□ -0.06
SVIP-205ENST00000533774 KIAA1217Q5T5P2 1943 aa14.66□□□□□ -0.06
SVIP-205ENST00000533774 RBM47A0AV96 593 aaKnown RBP14.66□□□□□ -0.06
SVIP-205ENST00000533774 ATP5JP18859 108 aa14.66□□□□□ -0.06
SVIP-205ENST00000533774 KCNJ6P48051 423 aa14.66□□□□□ -0.06
SVIP-205ENST00000533774 TKFCQ3LXA3 575 aa14.66□□□□□ -0.06
SVIP-205ENST00000533774 NFRKBQ6P4R8 1299 aa14.66□□□□□ -0.06
SVIP-205ENST00000533774 NSMFQ6X4W1 530 aa14.66□□□□□ -0.06
SVIP-205ENST00000533774 HFE2Q6ZVN8 426 aa14.66□□□□□ -0.06
SVIP-205ENST00000533774 NEK9Q8TD19 979 aa14.66□□□□□ -0.06
SVIP-205ENST00000533774 STAG1Q8WVM7 1258 aa14.66□□□□□ -0.06
SVIP-205ENST00000533774 DHX38Q92620 1227 aaKnown RBP14.66□□□□□ -0.06
SVIP-205ENST00000533774 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.66□□□□□ -0.06
SVIP-205ENST00000533774 H3BQ06 376 aaPredicted RBP14.65□□□□□ -0.06
SVIP-205ENST00000533774 DCXO43602 365 aa14.65□□□□□ -0.06
SVIP-205ENST00000533774 GJB5O95377 273 aa14.65□□□□□ -0.06
SVIP-205ENST00000533774 TTLL1O95922 423 aa14.65□□□□□ -0.06
SVIP-205ENST00000533774 FDX1P10109 184 aa14.65□□□□□ -0.06
SVIP-205ENST00000533774 STAT2P52630 851 aa14.65□□□□□ -0.06
SVIP-205ENST00000533774 CSPP1Q1MSJ5 1256 aa14.65□□□□□ -0.06
SVIP-205ENST00000533774 OR6J1Q8NGC5 347 aa14.65□□□□□ -0.06
SVIP-205ENST00000533774 KIF1BPQ96EK5 621 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms