RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 DIS3LQ8TF46 1054 aaKnown RBP11.44□□□□□ -0.58
NUP98-220ENST00000533346 CHMP4CQ96CF2 233 aa11.44□□□□□ -0.58
NUP98-220ENST00000533346 UPF3AQ9H1J1 476 aaKnown RBP11.44□□□□□ -0.58
NUP98-220ENST00000533346 VTA1Q9NP79 307 aa11.44□□□□□ -0.58
NUP98-220ENST00000533346 BAZ2BQ9UIF8 2168 aaKnown RBP11.44□□□□□ -0.58
NUP98-220ENST00000533346 CCDC69A6NI79 296 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 B4DLN1 442 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 OPLAHO14841 1288 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 EIF5BO60841 1220 aaKnown RBP11.43□□□□□ -0.58
NUP98-220ENST00000533346 HSD17B4P51659 736 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 MRPL12P52815 198 aaKnown RBP11.43□□□□□ -0.58
NUP98-220ENST00000533346 EVCP57679 992 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 GJA9P57773 515 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 LRRC41Q15345 812 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 NSMFQ6X4W1 530 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 RNF180Q86T96 592 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 CTCFLQ8NI51 663 aaPredicted RBP11.43□□□□□ -0.58
NUP98-220ENST00000533346 IL17RAQ96F46 866 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 IWS1Q96ST2 819 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 MPHOSPH6Q99547 160 aaKnown RBP11.43□□□□□ -0.58
NUP98-220ENST00000533346 USP26Q9BXU7 913 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 PHF24Q9UPV7 400 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 COLQQ9Y215 455 aaPredicted RBP11.43□□□□□ -0.58
NUP98-220ENST00000533346 GNEQ9Y223 722 aaKnown RBP11.43□□□□□ -0.58
NUP98-220ENST00000533346 SNX14Q9Y5W7 946 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 NR2E3Q9Y5X4 410 aa11.43□□□□□ -0.58
NUP98-220ENST00000533346 NID2Q14112 1375 aa11.42□□□□□ -0.58
NUP98-220ENST00000533346 MOXD2PA6NHM9 499 aa11.42□□□□□ -0.58
NUP98-220ENST00000533346 PPP1R11O60927 126 aaPredicted RBP11.42□□□□□ -0.58
NUP98-220ENST00000533346 CCDC144BQ3MJ40 725 aa11.42□□□□□ -0.58
NUP98-220ENST00000533346 SLC30A10Q6XR72 485 aa11.42□□□□□ -0.58
NUP98-220ENST00000533346 FANCBQ8NB91 859 aa11.42□□□□□ -0.58
NUP98-220ENST00000533346 SYTL5Q8TDW5 730 aaPredicted RBP11.42□□□□□ -0.58
NUP98-220ENST00000533346 PIGSQ96S52 555 aa11.42□□□□□ -0.58
NUP98-220ENST00000533346 TM6SF1Q9BZW5 370 aa11.42□□□□□ -0.58
NUP98-220ENST00000533346 VAT1LQ9HCJ6 419 aa11.42□□□□□ -0.58
NUP98-220ENST00000533346 XPNPEP3Q9NQH7 507 aa11.42□□□□□ -0.58
NUP98-220ENST00000533346 GPHNQ9NQX3 736 aaPredicted RBP11.42□□□□□ -0.58
NUP98-220ENST00000533346 SLC12A7Q9Y666 1083 aa11.42□□□□□ -0.58
NUP98-220ENST00000533346 PTPDC1A2A3K4 754 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 KBTBD13C9JR72 458 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 NKRFO15226 690 aaKnown RBP eCLIP11.41□□□□□ -0.58
NUP98-220ENST00000533346 CTAGE5O15320 804 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 ADCY6O43306 1168 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 EVI5O60447 810 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 PSMA5P28066 241 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 USH1GQ495M9 461 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 APOA5Q6Q788 366 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 SRBD1Q8N5C6 995 aaKnown RBP11.41□□□□□ -0.58
NUP98-220ENST00000533346 NSUN6Q8TEA1 469 aaKnown RBP11.41□□□□□ -0.58
NUP98-220ENST00000533346 TBC1D5Q92609 795 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 DPF3Q92784 378 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 PURBQ96QR8 312 aaKnown RBP11.41□□□□□ -0.58
NUP98-220ENST00000533346 SEZ6LQ9BYH1 1024 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 PRO3102Q9H379 93 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 RBM28Q9NW13 759 aaKnown RBP11.41□□□□□ -0.58
NUP98-220ENST00000533346 ZHX1Q9UKY1 873 aaPredicted RBP11.41□□□□□ -0.58
NUP98-220ENST00000533346 PCDHA1Q9Y5I3 950 aa11.41□□□□□ -0.58
NUP98-220ENST00000533346 SYNRGQ9UMZ2 1314 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 RANBP2P49792 3224 aaKnown RBP11.4□□□□□ -0.58
NUP98-220ENST00000533346 PIK3CDO00329 1044 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 DHX16O60231 1041 aaKnown RBP11.4□□□□□ -0.58
NUP98-220ENST00000533346 CALML3P27482 149 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 TNFAIP2Q03169 654 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 FUT2Q10981 343 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 DUSP28Q4G0W2 176 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 GJC2Q5T442 439 aaPredicted RBP11.4□□□□□ -0.58
NUP98-220ENST00000533346 SLC39A5Q6ZMH5 540 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 SYNE3Q6ZMZ3 975 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 NFXL1Q6ZNB6 911 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 TMTC3Q6ZXV5 915 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 PCSK9Q8NBP7 692 aaKnown RBP11.4□□□□□ -0.58
NUP98-220ENST00000533346 NUP133Q8WUM0 1156 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 SENP6Q9GZR1 1112 aaPredicted RBP11.4□□□□□ -0.58
NUP98-220ENST00000533346 ZSWIM6Q9HCJ5 1215 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 COL20A1Q9P218 1284 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 TRIOBPQ9H2D6 2365 aa11.4□□□□□ -0.58
NUP98-220ENST00000533346 ELP1O95163 1332 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 FRMPD4Q14CM0 1322 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 SMPD1P17405 629 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 RPS6KB1P23443 525 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 BMP8BP34820 402 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 ADCYAP1R1P41586 468 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 ANAPC15P60006 121 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 LRRC26Q2I0M4 334 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 ANO1Q5XXA6 986 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 BLOC1S2Q6QNY1 142 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 RRP36Q96EU6 259 aaKnown RBP11.39□□□□□ -0.59
NUP98-220ENST00000533346 TOX2Q96NM4 488 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 TAAR1Q96RJ0 339 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 ALDH8A1Q9H2A2 487 aaPredicted RBP11.39□□□□□ -0.59
NUP98-220ENST00000533346 SPC25Q9HBM1 224 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 FAM217BQ9NTX9 383 aaPredicted RBP11.39□□□□□ -0.59
NUP98-220ENST00000533346 BRPF3Q9ULD4 1205 aa11.39□□□□□ -0.59
NUP98-220ENST00000533346 CEP290O15078 2479 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 COL6A3P12111 3177 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.38□□□□□ -0.59
NUP98-220ENST00000533346 A0A1W2PPC1 479 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 H0YGN5 161 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 GCOM1H8Y6P7 765 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms