RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 MSL3Q8N5Y2 521 aaKnown RBP13.86□□□□□ -0.19
SSBP3-214ENST00000533209 TRPV1Q8NER1 839 aa13.86□□□□□ -0.19
SSBP3-214ENST00000533209 RNF208Q9H0X6 261 aa13.86□□□□□ -0.19
SSBP3-214ENST00000533209 SYNGAP1Q96PV0 1343 aa13.86□□□□□ -0.19
SSBP3-214ENST00000533209 ZNFX1Q9P2E3 1918 aaKnown RBP13.86□□□□□ -0.19
SSBP3-214ENST00000533209 SNAI1O95863 264 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-214ENST00000533209 IFNAR1P17181 557 aa13.85□□□□□ -0.19
SSBP3-214ENST00000533209 CCND3P30281 292 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-214ENST00000533209 HSD17B4P51659 736 aa13.85□□□□□ -0.19
SSBP3-214ENST00000533209 PRAMEF19Q5SWL8 479 aa13.85□□□□□ -0.19
SSBP3-214ENST00000533209 ARMCX2Q7L311 632 aa13.85□□□□□ -0.19
SSBP3-214ENST00000533209 SYTL5Q8TDW5 730 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-214ENST00000533209 TMEM106CQ9BVX2 250 aa13.85□□□□□ -0.19
SSBP3-214ENST00000533209 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.85□□□□□ -0.19
SSBP3-214ENST00000533209 HMX1Q9NP08 348 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-214ENST00000533209 PAK6Q9NQU5 681 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-214ENST00000533209 COL20A1Q9P218 1284 aa13.85□□□□□ -0.19
SSBP3-214ENST00000533209 DDX49Q9Y6V7 483 aaKnown RBP13.85□□□□□ -0.19
SSBP3-214ENST00000533209 POTEFA5A3E0 1075 aa13.84□□□□□ -0.19
SSBP3-214ENST00000533209 PFKFB2O60825 505 aa13.84□□□□□ -0.19
SSBP3-214ENST00000533209 LARGE1O95461 756 aa13.84□□□□□ -0.19
SSBP3-214ENST00000533209 CFBP00751 764 aa13.84□□□□□ -0.19
SSBP3-214ENST00000533209 GJB1P08034 283 aa13.84□□□□□ -0.19
SSBP3-214ENST00000533209 ALDH5A1P51649 535 aaPredicted RBP13.84□□□□□ -0.19
SSBP3-214ENST00000533209 SOX10P56693 466 aa13.84□□□□□ -0.19
SSBP3-214ENST00000533209 WWC2Q6AWC2 1192 aa13.84□□□□□ -0.19
SSBP3-214ENST00000533209 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
SSBP3-214ENST00000533209 SAMD3Q8N6K7 520 aa13.84□□□□□ -0.19
SSBP3-214ENST00000533209 MORC4Q8TE76 937 aa13.84□□□□□ -0.19
SSBP3-214ENST00000533209 GPKOWQ92917 476 aaPredicted RBP eCLIP13.84□□□□□ -0.19
SSBP3-214ENST00000533209 PHKBQ93100 1093 aa13.84□□□□□ -0.19
SSBP3-214ENST00000533209 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.84□□□□□ -0.19
SSBP3-214ENST00000533209 NRBP1Q9UHY1 535 aa13.84□□□□□ -0.19
SSBP3-214ENST00000533209 ASB14A6NK59 587 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 GCOM1H8Y6P7 765 aaPredicted RBP13.83□□□□□ -0.2
SSBP3-214ENST00000533209 PRPF3O43395 683 aaKnown RBP13.83□□□□□ -0.2
SSBP3-214ENST00000533209 PPFIA3O75145 1194 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 CAPN15O75808 1086 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 POLR2MP0CAP2 368 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 ZNF865P0CJ78 1059 aaPredicted RBP13.83□□□□□ -0.2
SSBP3-214ENST00000533209 SCRN1Q12765 414 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 RABEP1Q15276 862 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 PKN1Q16512 942 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 ME3Q16798 604 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 PFKFB3Q16875 520 aaPredicted RBP13.83□□□□□ -0.2
SSBP3-214ENST00000533209 HEATR3Q7Z4Q2 680 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 DNERQ8NFT8 737 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 DEFB118Q96PH6 123 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 TAAR1Q96RJ0 339 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 KATNBL1Q9H079 304 aa13.83□□□□□ -0.2
SSBP3-214ENST00000533209 SLKQ9H2G2 1235 aaPredicted RBP13.83□□□□□ -0.2
SSBP3-214ENST00000533209 MAP3K20Q9NYL2 800 aaKnown RBP13.83□□□□□ -0.2
SSBP3-214ENST00000533209 ADD3Q9UEY8 706 aaKnown RBP13.83□□□□□ -0.2
SSBP3-214ENST00000533209 KIAA0100Q14667 2235 aaKnown RBP13.82□□□□□ -0.2
SSBP3-214ENST00000533209 LOC102724159A0A0B4J2E5 919 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 hCG_1984214I3L0E3 225 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 STXBP3O00186 592 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 CPLX1O14810 134 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 SCG2P13521 617 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 EDNRBP24530 442 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 CNGA1P29973 690 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 HOXA13P31271 388 aaPredicted RBP13.82□□□□□ -0.2
SSBP3-214ENST00000533209 GJA8P48165 433 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 PWP2Q15269 919 aaKnown RBP13.82□□□□□ -0.2
SSBP3-214ENST00000533209 TYW1BQ6NUM6 668 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 ZNF713Q8N859 430 aaPredicted RBP13.82□□□□□ -0.2
SSBP3-214ENST00000533209 U2AF1L4Q8WU68 220 aaKnown RBP13.82□□□□□ -0.2
SSBP3-214ENST00000533209 SHISA4Q96DD7 197 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 SLC26A6Q9BXS9 759 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 RNF26Q9BY78 433 aaPredicted RBP13.82□□□□□ -0.2
SSBP3-214ENST00000533209 ABHD16BQ9H3Z7 469 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 BARHL2Q9NY43 387 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 RBM27Q9P2N5 1060 aaKnown RBP13.82□□□□□ -0.2
SSBP3-214ENST00000533209 CNPY2Q9Y2B0 182 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 PLXNA1Q9UIW2 1896 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 LCTP09848 1927 aa13.82□□□□□ -0.2
SSBP3-214ENST00000533209 BRCA2P51587 3418 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 MEIS2O14770 477 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 SEPT4O43236 478 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 SGPL1O95470 568 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 EN2P19622 333 aaPredicted RBP13.81□□□□□ -0.2
SSBP3-214ENST00000533209 ACVR2BQ13705 512 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 LHX8Q68G74 356 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 PPP1R18Q6NYC8 613 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 USP17L6PQ6QN14 398 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 NECAB1Q8N987 351 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 NSUN6Q8TEA1 469 aaKnown RBP13.81□□□□□ -0.2
SSBP3-214ENST00000533209 GTF3C6Q969F1 213 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 RMDN3Q96TC7 470 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 CRISPLD2Q9H0B8 497 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 PSTPIP2Q9H939 334 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 LIMCH1Q9UPQ0 1083 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 MYH6P13533 1939 aa13.81□□□□□ -0.2
SSBP3-214ENST00000533209 PIK3CDO00329 1044 aa13.8□□□□□ -0.2
SSBP3-214ENST00000533209 CTDNEP1O95476 244 aa13.8□□□□□ -0.2
SSBP3-214ENST00000533209 NAPAP54920 295 aa13.8□□□□□ -0.2
SSBP3-214ENST00000533209 AKAP17AQ02040 695 aaKnown RBP13.8□□□□□ -0.2
SSBP3-214ENST00000533209 SSRP1Q08945 709 aaKnown RBP13.8□□□□□ -0.2
SSBP3-214ENST00000533209 ST3GAL1Q11201 340 aa13.8□□□□□ -0.2
SSBP3-214ENST00000533209 CPLX2Q6PUV4 134 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms