RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 TMEM63BQ5T3F8 832 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 KRT40Q6A162 431 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 NSMFQ6X4W1 530 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 RETREG2Q8NC44 543 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 CHMP4CQ96CF2 233 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 CYP39A1Q9NYL5 469 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 TET1Q8NFU7 2136 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 COL4A4P53420 1690 aaPredicted RBP12.68□□□□□ -0.38
CTNND1-235ENST00000533189 GPAA1O43292 621 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 GPR37L1O60883 481 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
CTNND1-235ENST00000533189 PURAQ00577 322 aaKnown RBP12.68□□□□□ -0.38
CTNND1-235ENST00000533189 PDE4BQ07343 736 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 BRDTQ58F21 947 aaPredicted RBP12.68□□□□□ -0.38
CTNND1-235ENST00000533189 MUM1L1Q5H9M0 696 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 HERC6Q8IVU3 1022 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 SIRT2Q8IXJ6 389 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 NEDD1Q8NHV4 660 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 APPBP2Q92624 585 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 OSBP2Q969R2 916 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 GMCL1Q96IK5 515 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 MTG1Q9BT17 334 aaPredicted RBP12.68□□□□□ -0.38
CTNND1-235ENST00000533189 WDR11Q9BZH6 1224 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 EPB41L4AQ9HCS5 686 aaPredicted RBP12.68□□□□□ -0.38
CTNND1-235ENST00000533189 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
CTNND1-235ENST00000533189 TRIP12Q14669 1992 aaPredicted RBP12.68□□□□□ -0.38
CTNND1-235ENST00000533189 SCN10AQ9Y5Y9 1956 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 PLIN4Q96Q06 1357 aa12.68□□□□□ -0.38
CTNND1-235ENST00000533189 FAM86C2PA6NEL3 165 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 PLA2G6O60733 806 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 MCCP23508 829 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 KCNJ6P48051 423 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 SNAP25P60880 206 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 TFAP4Q01664 338 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 GRB10Q13322 594 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 KCTD1Q719H9 257 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 KBTBD3Q8NAB2 608 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 OR6J1Q8NGC5 347 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 NACAP1Q9BZK3 213 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 LRRCC1Q9C099 1032 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 CCPG1Q9ULG6 757 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 DDX19BQ9UMR2 479 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 NOD1Q9Y239 953 aa12.67□□□□□ -0.38
CTNND1-235ENST00000533189 PTPRSQ13332 1948 aa12.66□□□□□ -0.38
CTNND1-235ENST00000533189 RAD50Q92878 1312 aa12.66□□□□□ -0.38
CTNND1-235ENST00000533189 RNF113AO15541 343 aaKnown RBP12.66□□□□□ -0.38
CTNND1-235ENST00000533189 BAIAP3O94812 1187 aa12.66□□□□□ -0.38
CTNND1-235ENST00000533189 ZFYP08048 801 aaPredicted RBP12.66□□□□□ -0.38
CTNND1-235ENST00000533189 IQCF3P0C7M6 154 aa12.66□□□□□ -0.38
CTNND1-235ENST00000533189 BFSP2Q13515 415 aa12.66□□□□□ -0.38
CTNND1-235ENST00000533189 NBPF20Q3BBV1 942 aa12.66□□□□□ -0.38
CTNND1-235ENST00000533189 RCSD1Q6JBY9 416 aa12.66□□□□□ -0.38
CTNND1-235ENST00000533189 IFNL3Q8IZI9 196 aa12.66□□□□□ -0.38
CTNND1-235ENST00000533189 MORC4Q8TE76 937 aa12.66□□□□□ -0.38
CTNND1-235ENST00000533189 CHMP4BQ9H444 224 aaKnown RBP12.66□□□□□ -0.38
CTNND1-235ENST00000533189 ECHDC1Q9NTX5 307 aa12.66□□□□□ -0.38
CTNND1-235ENST00000533189 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
CTNND1-235ENST00000533189 LOC102724159A0A0B4J2E5 919 aa12.65□□□□□ -0.38
CTNND1-235ENST00000533189 PATL2C9JE40 543 aaKnown RBP12.65□□□□□ -0.38
CTNND1-235ENST00000533189 KPNA6O60684 536 aa12.65□□□□□ -0.38
CTNND1-235ENST00000533189 ARHGEF15O94989 841 aa12.65□□□□□ -0.38
CTNND1-235ENST00000533189 ICAM1P05362 532 aa12.65□□□□□ -0.38
CTNND1-235ENST00000533189 ALDH5A1P51649 535 aaPredicted RBP12.65□□□□□ -0.38
CTNND1-235ENST00000533189 HNRNPUQ00839 825 aaKnown RBP eCLIP12.65□□□□□ -0.38
CTNND1-235ENST00000533189 PTPN11Q06124 597 aaPredicted RBP12.65□□□□□ -0.38
CTNND1-235ENST00000533189 BAATQ14032 418 aaPredicted RBP12.65□□□□□ -0.38
CTNND1-235ENST00000533189 PWP2Q15269 919 aaKnown RBP12.65□□□□□ -0.38
CTNND1-235ENST00000533189 LRRFIP1Q32MZ4 808 aaKnown RBP12.65□□□□□ -0.38
CTNND1-235ENST00000533189 NFRKBQ6P4R8 1299 aa12.65□□□□□ -0.38
CTNND1-235ENST00000533189 GPATCH3Q96I76 525 aa12.65□□□□□ -0.38
CTNND1-235ENST00000533189 PURBQ96QR8 312 aaKnown RBP12.65□□□□□ -0.38
CTNND1-235ENST00000533189 ZBED2Q9BTP6 218 aa12.65□□□□□ -0.38
CTNND1-235ENST00000533189 ZBTB40Q9NUA8 1239 aa12.65□□□□□ -0.38
CTNND1-235ENST00000533189 LMCD1Q9NZU5 365 aa12.65□□□□□ -0.38
CTNND1-235ENST00000533189 STX8Q9UNK0 236 aa12.65□□□□□ -0.38
CTNND1-235ENST00000533189 MTMR7Q9Y216 660 aa12.65□□□□□ -0.38
CTNND1-235ENST00000533189 RBM47A0AV96 593 aaKnown RBP12.64□□□□□ -0.39
CTNND1-235ENST00000533189 PTPDC1A2A3K4 754 aa12.64□□□□□ -0.39
CTNND1-235ENST00000533189 PI4K2BG5E9Z4 385 aa12.64□□□□□ -0.39
CTNND1-235ENST00000533189 M0R2C6 588 aa12.64□□□□□ -0.39
CTNND1-235ENST00000533189 NKRFO15226 690 aaKnown RBP eCLIP12.64□□□□□ -0.39
CTNND1-235ENST00000533189 SMARCA5O60264 1052 aaPredicted RBP12.64□□□□□ -0.39
CTNND1-235ENST00000533189 PPP2R5BQ15173 497 aa12.64□□□□□ -0.39
CTNND1-235ENST00000533189 CCDC96Q2M329 555 aa12.64□□□□□ -0.39
CTNND1-235ENST00000533189 CCDC155Q8N6L0 562 aa12.64□□□□□ -0.39
CTNND1-235ENST00000533189 PPP1R13LQ8WUF5 828 aa12.64□□□□□ -0.39
CTNND1-235ENST00000533189 KHSRPQ92945 711 aaKnown RBP eCLIP12.64□□□□□ -0.39
CTNND1-235ENST00000533189 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
CTNND1-235ENST00000533189 NAPBQ9H115 298 aa12.64□□□□□ -0.39
CTNND1-235ENST00000533189 C11orf16Q9NQ32 467 aa12.64□□□□□ -0.39
CTNND1-235ENST00000533189 TSPY2A6NKD2 308 aa12.63□□□□□ -0.39
CTNND1-235ENST00000533189 LPXNO60711 386 aa12.63□□□□□ -0.39
CTNND1-235ENST00000533189 CHMP4BP1P59074 171 aa12.63□□□□□ -0.39
CTNND1-235ENST00000533189 PPARAQ07869 468 aa12.63□□□□□ -0.39
CTNND1-235ENST00000533189 PDE4DQ08499 809 aa12.63□□□□□ -0.39
CTNND1-235ENST00000533189 SPRED2Q7Z698 418 aa12.63□□□□□ -0.39
CTNND1-235ENST00000533189 GDPD5Q8WTR4 605 aa12.63□□□□□ -0.39
CTNND1-235ENST00000533189 SIP14410 1827 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms