RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SMPD1P17405 629 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 ATP5JP18859 108 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 C12orf60Q5U649 245 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 C16orf86Q6ZW13 317 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 ZBED2Q9BTP6 218 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 RAVER2Q9HCJ3 691 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 POLR3EQ9NVU0 708 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 FAM50BQ9Y247 325 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 MYH8P13535 1937 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 TRANK1O15050 2925 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 TRIM6-TRIM34B2RNG4 842 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 USP17L12C9JPN9 530 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 USP17L21D6R901 530 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 LCORLQ8N3X6 602 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 FAM133AQ8N9E0 248 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 DDRGK1Q96HY6 314 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 TGS1Q96RS0 853 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 NUP88Q99567 741 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 UPF3BQ9BZI7 483 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 BOLA2Q9H3K6 86 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 SUGCTQ9HAC7 445 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 SLC38A10Q9HBR0 1119 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 PRKAG3Q9UGI9 489 aa13.39□□□□□ -0.27
TRAPPC4-213ENST00000533149 MCM3APO60318 1980 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 ZNF532Q9HCE3 1301 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 F5H6K3 240 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 ERVK-21P61565 698 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 CNTN2Q02246 1040 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 KLRC3Q07444 240 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 BFSP2Q13515 415 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 HFE2Q6ZVN8 426 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 SPRED2Q7Z698 418 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 RILPL2Q969X0 211 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 KIFC2Q96AC6 838 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 ACAD9Q9H845 621 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 TSHZ2Q9NRE2 1034 aa13.38□□□□□ -0.27
TRAPPC4-213ENST00000533149 COL4A4P53420 1690 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 LCHNA4D1U4 455 aa13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 CDC45O75419 566 aa13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 NDUFB10O96000 172 aa13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 FDX1P10109 184 aa13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 LRRFIP1Q32MZ4 808 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 NEK9Q8TD19 979 aa13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 PRRX2Q99811 253 aa13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 ARMT1Q9H993 441 aa13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 GPHNQ9NQX3 736 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 HOMER2Q9NSB8 354 aa13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 CTNNA3Q9UI47 895 aa13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 FEM1BQ9UK73 627 aa13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 MTUS1Q9ULD2 1270 aa13.37□□□□□ -0.27
TRAPPC4-213ENST00000533149 TCRBV5S4A2TA0A5A2 114 aa13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 SOWAHBA6NEL2 793 aa13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 CPT1AP50416 773 aa13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 PTPN5P54829 565 aa13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 WDR5P61964 334 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 PURAQ00577 322 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 FAM47CQ5HY64 1035 aa13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 TAPT1Q6NXT6 567 aa13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 NFRKBQ6P4R8 1299 aa13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 RAD9AQ99638 391 aa13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 MTG1Q9BT17 334 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 VTA1Q9NP79 307 aa13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 PDGFCQ9NRA1 345 aa13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 NYAP2Q9P242 653 aa13.36□□□□□ -0.27
TRAPPC4-213ENST00000533149 SCN5AQ14524 2016 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 CYP2D7A0A087X1C5 515 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 PRKAB2O43741 272 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 PTGS1P23219 599 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 ZP2Q05996 745 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 PTPN11Q06124 597 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 PTPROQ16827 1216 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 DUSP28Q4G0W2 176 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 BRDTQ58F21 947 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 KIAA1211Q6ZU35 1233 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 EVI5LQ96CN4 794 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 PHOX2BQ99453 314 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 HAUS7Q99871 368 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 A1CFQ9NQ94 594 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 NOD1Q9Y239 953 aa13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-213ENST00000533149 KPNA6O60684 536 aa13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 GJB5O95377 273 aa13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 PARNO95453 639 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 SEC24BO95487 1268 aa13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 MYL3P08590 195 aa13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 PKN1Q16512 942 aa13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 NBPF20Q3BBV1 942 aa13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 TKFCQ3LXA3 575 aa13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 EEPD1Q7L9B9 569 aa13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 ADHFE1Q8IWW8 467 aa13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 FBXO16Q8IX29 292 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 CCDC155Q8N6L0 562 aa13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 DNAJC2Q99543 621 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-213ENST00000533149 BRWD1Q9NSI6 2320 aa13.33□□□□□ -0.27
TRAPPC4-213ENST00000533149 LINC01553A4QN01 128 aa13.33□□□□□ -0.28
TRAPPC4-213ENST00000533149 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-213ENST00000533149 EFCAB14O75071 495 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms