RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 PPP4CP60510 307 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 KCNB1Q14721 858 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 GSPT2Q8IYD1 628 aaKnown RBP16.66■□□□□ 0.26
SSH3-210ENST00000532881 NOC4LQ9BVI4 516 aaKnown RBP16.66■□□□□ 0.26
SSH3-210ENST00000532881 FAM207AQ9NSI2 230 aaPredicted RBP16.66■□□□□ 0.26
SSH3-210ENST00000532881 CAPN11Q9UMQ6 739 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 LEMD3Q9Y2U8 911 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.66■□□□□ 0.26
SSH3-210ENST00000532881 MYMKA6NI61 221 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 IDEP14735 1019 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 GTF2IP78347 998 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 ECM1Q16610 540 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 CEP112Q8N8E3 955 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 DAGLBQ8NCG7 672 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 PSMB7Q99436 277 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 DNAJC7Q99615 494 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 PYM1Q9BRP8 204 aaKnown RBP16.66■□□□□ 0.26
SSH3-210ENST00000532881 NHEJ1Q9H9Q4 299 aaPredicted RBP16.66■□□□□ 0.26
SSH3-210ENST00000532881 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
SSH3-210ENST00000532881 CTAGE15A4D2H0 777 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 CCDC151A5D8V7 595 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 ZNF263O14978 683 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 CTAGE8P0CG41 777 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 AKR1B1P15121 316 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 GRB10Q13322 594 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 STIM1Q13586 685 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 SOGA3Q5TF21 947 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 CTAGE6Q86UF2 777 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 CTAGE4Q8IX94 777 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 NEDD1Q8NHV4 660 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 ZFP91Q96JP5 570 aaPredicted RBP16.65■□□□□ 0.26
SSH3-210ENST00000532881 THAP9Q9H5L6 903 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 C6orf50Q9HD87 102 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 BLOC1S4Q9NUP1 217 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 TBC1D7Q9P0N9 293 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 DDX60LQ5H9U9 1706 aaKnown RBP16.65■□□□□ 0.26
SSH3-210ENST00000532881 ROBO3Q96MS0 1386 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 SRGNP10124 158 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 SCNN1DP51172 638 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 GSTO1P78417 241 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 APBA1Q02410 837 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 CACNB1Q02641 598 aaPredicted RBP16.65■□□□□ 0.26
SSH3-210ENST00000532881 RAD51AP2Q09MP3 1159 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 TMED8Q6PL24 325 aaPredicted RBP16.65■□□□□ 0.26
SSH3-210ENST00000532881 KIAA1328Q86T90 577 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 REXO1Q8N1G1 1221 aaKnown RBP16.65■□□□□ 0.26
SSH3-210ENST00000532881 TTYH3Q9C0H2 523 aa16.65■□□□□ 0.26
SSH3-210ENST00000532881 DDX4Q9NQI0 724 aaKnown RBP16.65■□□□□ 0.26
SSH3-210ENST00000532881 GPR75-ASB3A0A0A6YYF3 556 aa16.64■□□□□ 0.25
SSH3-210ENST00000532881 FAM196BA6NMK8 535 aa16.64■□□□□ 0.25
SSH3-210ENST00000532881 PDHBP11177 359 aa16.64■□□□□ 0.25
SSH3-210ENST00000532881 CCNE1P24864 410 aa16.64■□□□□ 0.25
SSH3-210ENST00000532881 EEF1GP26641 437 aaKnown RBP16.64■□□□□ 0.25
SSH3-210ENST00000532881 DPP8Q6V1X1 898 aaPredicted RBP16.64■□□□□ 0.25
SSH3-210ENST00000532881 PNMA5Q96PV4 448 aa16.64■□□□□ 0.25
SSH3-210ENST00000532881 SPZ1Q9BXG8 430 aa16.64■□□□□ 0.25
SSH3-210ENST00000532881 TNNI2P48788 182 aa16.64■□□□□ 0.25
SSH3-210ENST00000532881 HNRNPH2P55795 449 aaKnown RBP16.64■□□□□ 0.25
SSH3-210ENST00000532881 SMARCAL1Q9NZC9 954 aa16.64■□□□□ 0.25
SSH3-210ENST00000532881 LRWD1Q9UFC0 647 aa16.64■□□□□ 0.25
SSH3-210ENST00000532881 PDE2AO00408 941 aaPredicted RBP16.63■□□□□ 0.25
SSH3-210ENST00000532881 PPP1R11O60927 126 aaPredicted RBP16.63■□□□□ 0.25
SSH3-210ENST00000532881 DNM2P50570 870 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 KCTD19Q17RG1 926 aaPredicted RBP16.63■□□□□ 0.25
SSH3-210ENST00000532881 KRT25Q7Z3Z0 450 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 ANKRD13CQ8N6S4 541 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 FGFBP2Q9BYJ0 223 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 GGA1Q9UJY5 639 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 BTAF1O14981 1849 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 LRRIQ3A6PVS8 624 aaPredicted RBP16.63■□□□□ 0.25
SSH3-210ENST00000532881 MAP2K7O14733 419 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 LDHCP07864 332 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 TRIM14Q14142 442 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 TSR1Q2NL82 804 aaKnown RBP16.63■□□□□ 0.25
SSH3-210ENST00000532881 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.63■□□□□ 0.25
SSH3-210ENST00000532881 KCTD1Q719H9 257 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 JAKMIP2Q96AA8 810 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 EHD2Q9NZN4 543 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 VPS18Q9P253 973 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 PCDHAC2Q9Y5I4 1007 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 NAV1Q8NEY1 1877 aa16.63■□□□□ 0.25
SSH3-210ENST00000532881 TAL1P17542 331 aaPredicted RBP16.62■□□□□ 0.25
SSH3-210ENST00000532881 PRPHP41219 470 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 VPS72Q15906 364 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 CALCRLQ16602 461 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 MSANTD4Q8NCY6 345 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 POLD4Q9HCU8 107 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 L1RE1Q9UN81 338 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 GNA11P29992 359 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 CACNB3P54284 484 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 TRAPPC11Q7Z392 1133 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 TBC1D16Q8TBP0 767 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 DHTKD1Q96HY7 919 aaPredicted RBP16.62■□□□□ 0.25
SSH3-210ENST00000532881 C7orf25Q9BPX7 421 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 MMRN2Q9H8L6 949 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 ADAM21Q9UKJ8 722 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 DAGLAQ9Y4D2 1042 aa16.62■□□□□ 0.25
SSH3-210ENST00000532881 MAST2Q6P0Q8 1798 aa16.61■□□□□ 0.25
SSH3-210ENST00000532881 A0A1W2PQC6 194 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms