RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 SHISA4Q96DD7 197 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 BARHL2Q9NY43 387 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 FLRT1Q9NZU1 646 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 hCG_1984214I3L0E3 225 aa24.6■■□□□ 1.53
CAPN1-220ENST00000530567 JAK2O60674 1132 aa24.6■■□□□ 1.53
CAPN1-220ENST00000530567 RNF207Q6ZRF8 634 aa24.6■■□□□ 1.53
CAPN1-220ENST00000530567 ZNF713Q8N859 430 aaPredicted RBP24.6■■□□□ 1.53
CAPN1-220ENST00000530567 TRIB2Q92519 343 aa24.6■■□□□ 1.53
CAPN1-220ENST00000530567 PURBQ96QR8 312 aaKnown RBP24.6■■□□□ 1.53
CAPN1-220ENST00000530567 MCOLN1Q9GZU1 580 aa24.6■■□□□ 1.53
CAPN1-220ENST00000530567 MAF1Q9H063 256 aa24.6■■□□□ 1.53
CAPN1-220ENST00000530567 PTPDC1A2A3K4 754 aa24.59■■□□□ 1.53
CAPN1-220ENST00000530567 POTEB2H3BUK9 544 aa24.59■■□□□ 1.53
CAPN1-220ENST00000530567 ADCY3O60266 1144 aa24.59■■□□□ 1.53
CAPN1-220ENST00000530567 ELNP15502 786 aa24.59■■□□□ 1.53
CAPN1-220ENST00000530567 HSD17B4P51659 736 aa24.59■■□□□ 1.53
CAPN1-220ENST00000530567 AKAP17AQ02040 695 aaKnown RBP24.59■■□□□ 1.53
CAPN1-220ENST00000530567 MCF2L2Q86YR7 1114 aa24.59■■□□□ 1.53
CAPN1-220ENST00000530567 PXYLP1Q8TE99 480 aa24.59■■□□□ 1.53
CAPN1-220ENST00000530567 MAML3Q96JK9 1138 aa24.59■■□□□ 1.53
CAPN1-220ENST00000530567 COL20A1Q9P218 1284 aa24.59■■□□□ 1.53
CAPN1-220ENST00000530567 DIS3Q9Y2L1 958 aaKnown RBP24.59■■□□□ 1.53
CAPN1-220ENST00000530567 SOWAHBA6NEL2 793 aa24.58■■□□□ 1.53
CAPN1-220ENST00000530567 DEXIO95424 95 aa24.58■■□□□ 1.53
CAPN1-220ENST00000530567 FDPSP14324 419 aaKnown RBP24.58■■□□□ 1.53
CAPN1-220ENST00000530567 PPP1R18Q6NYC8 613 aa24.58■■□□□ 1.53
CAPN1-220ENST00000530567 SYTL5Q8TDW5 730 aaPredicted RBP24.58■■□□□ 1.53
CAPN1-220ENST00000530567 AIFM3Q96NN9 605 aa24.58■■□□□ 1.53
CAPN1-220ENST00000530567 CFBP00751 764 aa24.57■■□□□ 1.52
CAPN1-220ENST00000530567 CALML3P27482 149 aa24.57■■□□□ 1.52
CAPN1-220ENST00000530567 NAPAP54920 295 aa24.57■■□□□ 1.52
CAPN1-220ENST00000530567 SLAIN1Q8ND83 568 aa24.57■■□□□ 1.52
CAPN1-220ENST00000530567 SMARCC2Q8TAQ2 1214 aa24.57■■□□□ 1.52
CAPN1-220ENST00000530567 HOXA13P31271 388 aaPredicted RBP24.56■■□□□ 1.52
CAPN1-220ENST00000530567 GRK4P32298 578 aa24.56■■□□□ 1.52
CAPN1-220ENST00000530567 OLFML2BQ68BL8 750 aa24.56■■□□□ 1.52
CAPN1-220ENST00000530567 LLPHQ9BRT6 129 aaKnown RBP24.56■■□□□ 1.52
CAPN1-220ENST00000530567 SLC5A4Q9NY91 659 aa24.56■■□□□ 1.52
CAPN1-220ENST00000530567 ORC3Q9UBD5 711 aaPredicted RBP24.56■■□□□ 1.52
CAPN1-220ENST00000530567 CENPFP49454 3210 aa24.56■■□□□ 1.52
CAPN1-220ENST00000530567 MEIS2O14770 477 aa24.55■■□□□ 1.52
CAPN1-220ENST00000530567 ZNF467Q7Z7K2 595 aaPredicted RBP24.55■■□□□ 1.52
CAPN1-220ENST00000530567 SAMD3Q8N6K7 520 aa24.55■■□□□ 1.52
CAPN1-220ENST00000530567 SH3TC2Q8TF17 1288 aa24.55■■□□□ 1.52
CAPN1-220ENST00000530567 SNX21Q969T3 373 aa24.55■■□□□ 1.52
CAPN1-220ENST00000530567 MAP3K20Q9NYL2 800 aaKnown RBP24.55■■□□□ 1.52
CAPN1-220ENST00000530567 VPS54Q9P1Q0 977 aa24.55■■□□□ 1.52
CAPN1-220ENST00000530567 MCM3APO60318 1980 aa24.54■■□□□ 1.52
CAPN1-220ENST00000530567 ESYT2A0FGR8 921 aa24.54■■□□□ 1.52
CAPN1-220ENST00000530567 GCOM1H8Y6P7 765 aaPredicted RBP24.54■■□□□ 1.52
CAPN1-220ENST00000530567 PIK3CDO00329 1044 aa24.54■■□□□ 1.52
CAPN1-220ENST00000530567 POLR2MP0CAP2 368 aa24.54■■□□□ 1.52
CAPN1-220ENST00000530567 TRIM32Q13049 653 aa24.54■■□□□ 1.52
CAPN1-220ENST00000530567 TRMT44Q8IYL2 757 aaKnown RBP24.54■■□□□ 1.52
CAPN1-220ENST00000530567 PSTPIP2Q9H939 334 aa24.54■■□□□ 1.52
CAPN1-220ENST00000530567 LRRC37A2A6NM11 1700 aa24.54■■□□□ 1.52
CAPN1-220ENST00000530567 USP17L6PQ6QN14 398 aa24.53■■□□□ 1.52
CAPN1-220ENST00000530567 MAMDC4Q6UXC1 1216 aa24.53■■□□□ 1.52
CAPN1-220ENST00000530567 ZMYND12Q9H0C1 365 aa24.53■■□□□ 1.52
CAPN1-220ENST00000530567 ADAMTS3O15072 1205 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 HMGCRP04035 888 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 ALDH5A1P51649 535 aaPredicted RBP24.52■■□□□ 1.52
CAPN1-220ENST00000530567 SLC9C1Q4G0N8 1177 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 ARMC5Q96C12 935 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 TAAR1Q96RJ0 339 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 RIC8AQ9NPQ8 531 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 SH3GLB2Q9NR46 395 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 DDX49Q9Y6V7 483 aaKnown RBP24.52■■□□□ 1.52
CAPN1-220ENST00000530567 SMCO2A6NFE2 343 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 INHAP05111 366 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 CYP2C19P33261 490 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 CUL4AQ13619 759 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 UBE2SQ16763 222 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 CUL5Q93034 780 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 TINF2Q9BSI4 451 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 GJB4Q9NTQ9 266 aa24.52■■□□□ 1.52
CAPN1-220ENST00000530567 ADCY7P51828 1080 aa24.51■■□□□ 1.51
CAPN1-220ENST00000530567 MAP3K21Q5TCX8 1036 aa24.51■■□□□ 1.51
CAPN1-220ENST00000530567 MSL3Q8N5Y2 521 aaKnown RBP24.51■■□□□ 1.51
CAPN1-220ENST00000530567 DNERQ8NFT8 737 aa24.51■■□□□ 1.51
CAPN1-220ENST00000530567 MORC4Q8TE76 937 aa24.51■■□□□ 1.51
CAPN1-220ENST00000530567 CCDC12Q8WUD4 166 aaPredicted RBP24.51■■□□□ 1.51
CAPN1-220ENST00000530567 ALG1Q9BT22 464 aa24.51■■□□□ 1.51
CAPN1-220ENST00000530567 SYNGAP1Q96PV0 1343 aa24.5■■□□□ 1.51
CAPN1-220ENST00000530567 K7ELQ4 463 aaPredicted RBP24.5■■□□□ 1.51
CAPN1-220ENST00000530567 EDNRBP24530 442 aa24.5■■□□□ 1.51
CAPN1-220ENST00000530567 NPY5RQ15761 445 aa24.5■■□□□ 1.51
CAPN1-220ENST00000530567 FCHSD1Q86WN1 690 aa24.5■■□□□ 1.51
CAPN1-220ENST00000530567 TEX2Q8IWB9 1127 aa24.5■■□□□ 1.51
CAPN1-220ENST00000530567 CCDC148Q8NFR7 591 aa24.5■■□□□ 1.51
CAPN1-220ENST00000530567 ADD3Q9UEY8 706 aaKnown RBP24.5■■□□□ 1.51
CAPN1-220ENST00000530567 FRMPD4Q14CM0 1322 aa24.49■■□□□ 1.51
CAPN1-220ENST00000530567 SNAI1O95863 264 aaPredicted RBP24.49■■□□□ 1.51
CAPN1-220ENST00000530567 CLK2P49760 499 aaKnown RBP24.49■■□□□ 1.51
CAPN1-220ENST00000530567 MRPL12P52815 198 aaKnown RBP24.49■■□□□ 1.51
CAPN1-220ENST00000530567 HMGN5P82970 282 aaKnown RBP24.49■■□□□ 1.51
CAPN1-220ENST00000530567 MFSD14CQ5VZR4 134 aa24.49■■□□□ 1.51
CAPN1-220ENST00000530567 ARMCX2Q7L311 632 aa24.49■■□□□ 1.51
CAPN1-220ENST00000530567 FAM177A1Q8N128 213 aaPredicted RBP24.49■■□□□ 1.51
CAPN1-220ENST00000530567 WASF1Q92558 559 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms