RNA–Protein interactions for RNA: ENST00000529904.2

SNRNP35-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-206ENST00000529904 SMARCA1P28370 1054 aa14.61□□□□□ -0.07
SNRNP35-206ENST00000529904 ALDH5A1P51649 535 aaPredicted RBP14.61□□□□□ -0.07
SNRNP35-206ENST00000529904 Q6ZUG5 572 aa14.61□□□□□ -0.07
SNRNP35-206ENST00000529904 CMTR1Q8N1G2 835 aaKnown RBP14.61□□□□□ -0.07
SNRNP35-206ENST00000529904 CCDC82Q8N4S0 544 aa14.61□□□□□ -0.07
SNRNP35-206ENST00000529904 C11orf49Q9H6J7 331 aa14.61□□□□□ -0.07
SNRNP35-206ENST00000529904 XPNPEP3Q9NQH7 507 aa14.61□□□□□ -0.07
SNRNP35-206ENST00000529904 RBM28Q9NW13 759 aaKnown RBP14.61□□□□□ -0.07
SNRNP35-206ENST00000529904 CYP46A1Q9Y6A2 500 aa14.61□□□□□ -0.07
SNRNP35-206ENST00000529904 SMCHD1A6NHR9 2005 aa14.61□□□□□ -0.07
SNRNP35-206ENST00000529904 ASTN1O14525 1302 aa14.61□□□□□ -0.07
SNRNP35-206ENST00000529904 FRMPD3Q5JV73 1810 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 LOC102724159A0A0B4J2E5 919 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 GOLGA8AA7E2F4 631 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 GOLGA8BA8MQT2 603 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 B4DLN1 442 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 KBTBD13C9JR72 458 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 MRPL12P52815 198 aaKnown RBP14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 PWP2Q15269 919 aaKnown RBP14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 RTN1Q16799 776 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 CCDC144BQ3MJ40 725 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 RUFY3Q7L099 469 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 SRBD1Q8N5C6 995 aaKnown RBP14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 DNERQ8NFT8 737 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 TBC1D5Q92609 795 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 DPF3Q92784 378 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 BRF1Q92994 677 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 BRCA2P51587 3418 aa14.6□□□□□ -0.07
SNRNP35-206ENST00000529904 DNM1LO00429 736 aa14.59□□□□□ -0.07
SNRNP35-206ENST00000529904 MNX1P50219 401 aaPredicted RBP14.59□□□□□ -0.07
SNRNP35-206ENST00000529904 PDE4DQ08499 809 aa14.59□□□□□ -0.07
SNRNP35-206ENST00000529904 APOBRQ0VD83 1088 aa14.59□□□□□ -0.07
SNRNP35-206ENST00000529904 GJC2Q5T442 439 aaPredicted RBP14.59□□□□□ -0.07
SNRNP35-206ENST00000529904 TMTC3Q6ZXV5 915 aa14.59□□□□□ -0.07
SNRNP35-206ENST00000529904 NOL8Q76FK4 1167 aaKnown RBP14.59□□□□□ -0.07
SNRNP35-206ENST00000529904 EEPD1Q7L9B9 569 aa14.59□□□□□ -0.07
SNRNP35-206ENST00000529904 ZSWIM6Q9HCJ5 1215 aa14.59□□□□□ -0.07
SNRNP35-206ENST00000529904 DDX49Q9Y6V7 483 aaKnown RBP14.59□□□□□ -0.07
SNRNP35-206ENST00000529904 METAP2P50579 478 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 RCAN1P53805 252 aa14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 PPP2R5BQ15173 497 aa14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 RNF180Q86T96 592 aa14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 FBXO16Q8IX29 292 aaPredicted RBP14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 SAMD3Q8N6K7 520 aa14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 SYTL5Q8TDW5 730 aaPredicted RBP14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 MORC4Q8TE76 937 aa14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 NSUN6Q8TEA1 469 aaKnown RBP14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 LENG1Q96BZ8 264 aaPredicted RBP14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 UPF3BQ9BZI7 483 aaKnown RBP14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 TM6SF1Q9BZW5 370 aa14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 VTA1Q9NP79 307 aa14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 MAP3K20Q9NYL2 800 aaKnown RBP14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 LCTP09848 1927 aa14.58□□□□□ -0.08
SNRNP35-206ENST00000529904 TNRC18O15417 2968 aaPredicted RBP14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 CCDC196A0A1B0GTZ2 297 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 hCG_1642624A0A1W2PR95 340 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 GCOM1H8Y6P7 765 aaPredicted RBP14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 OPLAHO14841 1288 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 DUSP11O75319 330 aaKnown RBP14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 PGK1P00558 417 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 POLR2MP0CAP2 368 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 HOXA13P31271 388 aaPredicted RBP14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 ADCYAP1R1P41586 468 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 HSD17B4P51659 736 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 TNFAIP2Q03169 654 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 LRRC41Q15345 812 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 ARHGEF16Q5VV41 709 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 FBXL16Q8N461 479 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 TAAR1Q96RJ0 339 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 RMDN3Q96TC7 470 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 AGXT2Q9BYV1 514 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 KATNBL1Q9H079 304 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 SPC25Q9HBM1 224 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 COL20A1Q9P218 1284 aa14.57□□□□□ -0.08
SNRNP35-206ENST00000529904 MCM3APO60318 1980 aa14.56□□□□□ -0.08
SNRNP35-206ENST00000529904 EVI5O60447 810 aa14.56□□□□□ -0.08
SNRNP35-206ENST00000529904 COL6A1P12109 1028 aa14.56□□□□□ -0.08
SNRNP35-206ENST00000529904 ANAPC15P60006 121 aa14.56□□□□□ -0.08
SNRNP35-206ENST00000529904 IQSEC1Q6DN90 963 aa14.56□□□□□ -0.08
SNRNP35-206ENST00000529904 SENP6Q9GZR1 1112 aaPredicted RBP14.56□□□□□ -0.08
SNRNP35-206ENST00000529904 PDGFCQ9NRA1 345 aa14.56□□□□□ -0.08
SNRNP35-206ENST00000529904 SYNRGQ9UMZ2 1314 aa14.56□□□□□ -0.08
SNRNP35-206ENST00000529904 LRRC37A2A6NM11 1700 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 ADCY6O43306 1168 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 C6orf222P0C671 652 aaPredicted RBP14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 EIF2AK2P19525 551 aaKnown RBP14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 EDNRBP24530 442 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 CDC27P30260 824 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 GHRHRQ02643 423 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 STXBP2Q15833 593 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 TAPT1Q6NXT6 567 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 HEATR3Q7Z4Q2 680 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 FCHSD1Q86WN1 690 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 CUL5Q93034 780 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 IWS1Q96ST2 819 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 AP5M1Q9H0R1 490 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 PXMP2Q9NR77 195 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 PDRG1Q9NUG6 133 aa14.55□□□□□ -0.08
SNRNP35-206ENST00000529904 NR2E3Q9Y5X4 410 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms