RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 MYL3P08590 195 aa12.39□□□□□ -0.43
COPB1-207ENST00000529866 TSPY3P0CV98 308 aa12.39□□□□□ -0.43
COPB1-207ENST00000529866 TSPY8P0CW00 308 aa12.39□□□□□ -0.43
COPB1-207ENST00000529866 GNAT2P19087 354 aa12.39□□□□□ -0.43
COPB1-207ENST00000529866 PTGS1P23219 599 aa12.39□□□□□ -0.43
COPB1-207ENST00000529866 PURAQ00577 322 aaKnown RBP12.39□□□□□ -0.43
COPB1-207ENST00000529866 NSMFQ6X4W1 530 aa12.39□□□□□ -0.43
COPB1-207ENST00000529866 CCDC155Q8N6L0 562 aa12.39□□□□□ -0.43
COPB1-207ENST00000529866 GMCL1Q96IK5 515 aa12.39□□□□□ -0.43
COPB1-207ENST00000529866 ADD3Q9UEY8 706 aaKnown RBP12.39□□□□□ -0.43
COPB1-207ENST00000529866 TCF20Q9UGU0 1960 aaKnown RBP12.39□□□□□ -0.43
COPB1-207ENST00000529866 PLIN4Q96Q06 1357 aa12.39□□□□□ -0.43
COPB1-207ENST00000529866 ZNF536O15090 1300 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 BRWD1Q9NSI6 2320 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 LOC102724159A0A0B4J2E5 919 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 GSG1L2A8MUP6 293 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 PLA2G6O60733 806 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 SLC3A2P08195 630 aaKnown RBP12.38□□□□□ -0.43
COPB1-207ENST00000529866 IQCF3P0C7M6 154 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 PDE4BQ07343 736 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 PWP2Q15269 919 aaKnown RBP12.38□□□□□ -0.43
COPB1-207ENST00000529866 LRRFIP1Q32MZ4 808 aaKnown RBP12.38□□□□□ -0.43
COPB1-207ENST00000529866 NFRKBQ6P4R8 1299 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 ALYREFQ86V81 257 aaKnown RBP12.38□□□□□ -0.43
COPB1-207ENST00000529866 SIRT2Q8IXJ6 389 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 OR6J1Q8NGC5 347 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 MORC4Q8TE76 937 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 WDR11Q9BZH6 1224 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 CCPG1Q9ULG6 757 aa12.38□□□□□ -0.43
COPB1-207ENST00000529866 BAZ2AQ9UIF9 1905 aaKnown RBP12.37□□□□□ -0.43
COPB1-207ENST00000529866 REV3LO60673 3130 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 NKRFO15226 690 aaKnown RBP eCLIP12.37□□□□□ -0.43
COPB1-207ENST00000529866 KPNA6O60684 536 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 LPXNO60711 386 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 ARHGEF15O94989 841 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 APPP05067 770 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 ALADP13716 330 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 PTPN11Q06124 597 aaPredicted RBP12.37□□□□□ -0.43
COPB1-207ENST00000529866 PPP2R5BQ15173 497 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 GJD3Q8N144 294 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 NEDD1Q8NHV4 660 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 GDPD5Q8WTR4 605 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 APPBP2Q92624 585 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 KHSRPQ92945 711 aaKnown RBP eCLIP12.37□□□□□ -0.433e-8■■■□□ 15.1
COPB1-207ENST00000529866 MPHOSPH6Q99547 160 aaKnown RBP12.37□□□□□ -0.43
COPB1-207ENST00000529866 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 NACAP1Q9BZK3 213 aa12.37□□□□□ -0.43
COPB1-207ENST00000529866 DDX49Q9Y6V7 483 aaKnown RBP12.37□□□□□ -0.43
COPB1-207ENST00000529866 GREB1LQ9C091 1923 aaPredicted RBP12.37□□□□□ -0.43
COPB1-207ENST00000529866 GPAA1O43292 621 aa12.36□□□□□ -0.43
COPB1-207ENST00000529866 MS4A1P11836 297 aa12.36□□□□□ -0.43
COPB1-207ENST00000529866 MCCP23508 829 aa12.36□□□□□ -0.43
COPB1-207ENST00000529866 SSTR3P32745 418 aaPredicted RBP12.36□□□□□ -0.43
COPB1-207ENST00000529866 ALDH5A1P51649 535 aaPredicted RBP12.36□□□□□ -0.43
COPB1-207ENST00000529866 CSPP1Q1MSJ5 1256 aa12.36□□□□□ -0.43
COPB1-207ENST00000529866 NBPF20Q3BBV1 942 aa12.36□□□□□ -0.43
COPB1-207ENST00000529866 MUM1L1Q5H9M0 696 aa12.36□□□□□ -0.43
COPB1-207ENST00000529866 CAGE1Q8TC20 777 aa12.36□□□□□ -0.43
COPB1-207ENST00000529866 UIMC1Q96RL1 719 aa12.36□□□□□ -0.43
COPB1-207ENST00000529866 UBE2ZQ9H832 354 aaPredicted RBP12.36□□□□□ -0.43
COPB1-207ENST00000529866 EPB41L4AQ9HCS5 686 aaPredicted RBP12.36□□□□□ -0.43
COPB1-207ENST00000529866 LRRC37A2A6NM11 1700 aa12.36□□□□□ -0.43
COPB1-207ENST00000529866 MCM3APO60318 1980 aa12.36□□□□□ -0.43
COPB1-207ENST00000529866 PARNO95453 639 aaKnown RBP12.35□□□□□ -0.43
COPB1-207ENST00000529866 ICAM1P05362 532 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 ZFYP08048 801 aaPredicted RBP12.35□□□□□ -0.43
COPB1-207ENST00000529866 WDR5P61964 334 aaKnown RBP12.35□□□□□ -0.43
COPB1-207ENST00000529866 TFAP4Q01664 338 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 LEXMQ3ZCV2 418 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 TMEM63BQ5T3F8 832 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 C20orf194Q5TEA3 1177 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 KCTD1Q719H9 257 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 KBTBD3Q8NAB2 608 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 AFAP1L1Q8TED9 768 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 OSBP2Q969R2 916 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 GPATCH3Q96I76 525 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 TGS1Q96RS0 853 aaKnown RBP12.35□□□□□ -0.43
COPB1-207ENST00000529866 CRBNQ96SW2 442 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 PRR12Q9ULL5 1215 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 STX8Q9UNK0 236 aa12.35□□□□□ -0.43
COPB1-207ENST00000529866 GBF1Q92538 1859 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 RBM47A0AV96 593 aaKnown RBP12.34□□□□□ -0.43
COPB1-207ENST00000529866 PTPDC1A2A3K4 754 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 EFCAB14O75071 495 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 KCNA5P22460 613 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
COPB1-207ENST00000529866 PUS10Q3MIT2 529 aaKnown RBP12.34□□□□□ -0.43
COPB1-207ENST00000529866 RCSD1Q6JBY9 416 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 FAM178BQ8IXR5 827 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 SCFD2Q8WU76 684 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 CHMP4CQ96CF2 233 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 LRRCC1Q9C099 1032 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 KCNH6Q9H252 994 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
COPB1-207ENST00000529866 CD320Q9NPF0 282 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 ECHDC1Q9NTX5 307 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 ZBTB40Q9NUA8 1239 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 PNMA2Q9UL42 364 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 DDX19BQ9UMR2 479 aa12.34□□□□□ -0.43
COPB1-207ENST00000529866 LCHNA4D1U4 455 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms