RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 SYT1P21579 422 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 PTPREP23469 700 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 GNA11P29992 359 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-217ENST00000529133 PSMC4P43686 418 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 MRPL12P52815 198 aaKnown RBP13.14□□□□□ -0.31
CAPN1-217ENST00000529133 RPS6P62753 249 aaKnown RBP13.14□□□□□ -0.31
CAPN1-217ENST00000529133 GRB14Q14449 540 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 KCTD2Q14681 263 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 USP17L6PQ6QN14 398 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 ABRAQ8N0Z2 381 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 ANKRD35Q8N283 1001 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 SAMD3Q8N6K7 520 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 CD99L2Q8TCZ2 262 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 OXER1Q8TDS5 423 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 SYTL5Q8TDW5 730 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-217ENST00000529133 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-217ENST00000529133 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 IPO9Q96P70 1041 aaKnown RBP13.14□□□□□ -0.31
CAPN1-217ENST00000529133 GLT8D2Q9H1C3 349 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 COL20A1Q9P218 1284 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 DAXXQ9UER7 740 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-217ENST00000529133 IVNS1ABPQ9Y6Y0 642 aa13.14□□□□□ -0.31
CAPN1-217ENST00000529133 ZNF236Q9UL36 1845 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 MYH6P13533 1939 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 DNAJC25-GNG10A0A024R161 153 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 SLC15A5A6NIM6 579 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 H3BQV1 296 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 M0R2N6 131 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 STRNO43815 780 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 PGK2P07205 417 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 HSPA1AP0DMV8 641 aaKnown RBP13.13□□□□□ -0.31
CAPN1-217ENST00000529133 HSPA1BP0DMV9 641 aaKnown RBP13.13□□□□□ -0.31
CAPN1-217ENST00000529133 ADORA2AP29274 412 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 KRT2P35908 639 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 CLK2P49760 499 aaKnown RBP13.13□□□□□ -0.31
CAPN1-217ENST00000529133 KIF22Q14807 665 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 MORN1Q5T089 497 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 IFFO2Q5TF58 517 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 DIS3L2Q8IYB7 885 aaKnown RBP13.13□□□□□ -0.31
CAPN1-217ENST00000529133 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 REXO1Q8N1G1 1221 aaKnown RBP13.13□□□□□ -0.31
CAPN1-217ENST00000529133 BICD2Q8TD16 824 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 RASGRP4Q8TDF6 673 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 ERO1AQ96HE7 468 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 TMEM260Q9NX78 707 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 MAP3K20Q9NYL2 800 aaKnown RBP13.13□□□□□ -0.31
CAPN1-217ENST00000529133 ZSWIM8A7E2V4 1837 aa13.13□□□□□ -0.31
CAPN1-217ENST00000529133 VPS37CA5D8V6 355 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-217ENST00000529133 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 STX6O43752 255 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 HSPA8P11142 646 aaKnown RBP13.12□□□□□ -0.31
CAPN1-217ENST00000529133 DDIT3P35638 169 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 AP3B2Q13367 1082 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 SAFBQ15424 915 aaKnown RBP eCLIP13.12□□□□□ -0.31
CAPN1-217ENST00000529133 JAKMIP3Q5VZ66 844 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 FCHSD1Q86WN1 690 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 FAM133AQ8N9E0 248 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 SOCS4Q8WXH5 440 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 USP6NLQ92738 828 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 TNFRSF25Q93038 417 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
CAPN1-217ENST00000529133 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 BIN2Q9UBW5 565 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-217ENST00000529133 GJD2Q9UKL4 321 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 PCDHA6Q9UN73 950 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 MTMR6Q9Y217 621 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 PCDHA8Q9Y5H6 950 aa13.12□□□□□ -0.31
CAPN1-217ENST00000529133 PLXNB2O15031 1838 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 SOWAHBA6NEL2 793 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 BTBD18B2RXH4 712 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 FOXN1O15353 648 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 COBLO75128 1261 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 CNTN2Q02246 1040 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 MAP2K5Q13163 448 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 NR5A1Q13285 461 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 FGD4Q96M96 766 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 TAAR1Q96RJ0 339 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 ANO3Q9BYT9 981 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 ASTN1O14525 1302 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 FRMPD4Q14CM0 1322 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 RPTORQ8N122 1335 aa13.11□□□□□ -0.31
CAPN1-217ENST00000529133 SPDYE3A6NKU9 549 aa13.1□□□□□ -0.31
CAPN1-217ENST00000529133 FOSP01100 380 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-217ENST00000529133 PRKCZQ05513 592 aa13.1□□□□□ -0.31
CAPN1-217ENST00000529133 PKP1Q13835 747 aa13.1□□□□□ -0.31
CAPN1-217ENST00000529133 ZNF792Q3KQV3 632 aa13.1□□□□□ -0.31
CAPN1-217ENST00000529133 EARS2Q5JPH6 523 aaKnown RBP13.1□□□□□ -0.31
CAPN1-217ENST00000529133 MCTP2Q6DN12 878 aa13.1□□□□□ -0.31
CAPN1-217ENST00000529133 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
CAPN1-217ENST00000529133 NUDT12Q9BQG2 462 aa13.1□□□□□ -0.31
CAPN1-217ENST00000529133 FOXP1Q9H334 677 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-217ENST00000529133 GABRQQ9UN88 632 aa13.1□□□□□ -0.31
CAPN1-217ENST00000529133 SMCHD1A6NHR9 2005 aa13.1□□□□□ -0.31
CAPN1-217ENST00000529133 CCDC194A0A1B0GVG4 234 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 GNRH1P01148 92 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms