RNA–Protein interactions for RNA: ENST00000528953.1

AP002008.2-203, humanhuman

TSL 1 (best)

Gene AP002008.2, Length 707 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.2-203ENST00000528953 IL25Q9H293 177 aa20.54■□□□□ 0.88
AP002008.2-203ENST00000528953 CNNM2Q9H8M5 875 aa20.54■□□□□ 0.88
AP002008.2-203ENST00000528953 ZSWIM5Q9P217 1185 aa20.54■□□□□ 0.88
AP002008.2-203ENST00000528953 TLR3O15455 904 aaKnown RBP20.53■□□□□ 0.88
AP002008.2-203ENST00000528953 RPS6P62753 249 aaKnown RBP20.53■□□□□ 0.88
AP002008.2-203ENST00000528953 FAM126BQ8IXS8 530 aa20.53■□□□□ 0.88
AP002008.2-203ENST00000528953 RNPC3Q96LT9 517 aaKnown RBP20.53■□□□□ 0.88
AP002008.2-203ENST00000528953 UBA5Q9GZZ9 404 aa20.53■□□□□ 0.88
AP002008.2-203ENST00000528953 CPVLQ9H3G5 476 aa20.53■□□□□ 0.88
AP002008.2-203ENST00000528953 LAMA4Q16363 1823 aa20.53■□□□□ 0.88
AP002008.2-203ENST00000528953 TNKSO95271 1327 aa20.53■□□□□ 0.88
AP002008.2-203ENST00000528953 SMAD3P84022 425 aaKnown RBP20.52■□□□□ 0.88
AP002008.2-203ENST00000528953 DUSP28Q4G0W2 176 aa20.52■□□□□ 0.88
AP002008.2-203ENST00000528953 ASPRV1Q53RT3 343 aa20.52■□□□□ 0.88
AP002008.2-203ENST00000528953 TMEM63BQ5T3F8 832 aa20.52■□□□□ 0.88
AP002008.2-203ENST00000528953 ZNF697Q5TEC3 545 aa20.52■□□□□ 0.88
AP002008.2-203ENST00000528953 SLC17A8Q8NDX2 589 aa20.52■□□□□ 0.88
AP002008.2-203ENST00000528953 MPHOSPH6Q99547 160 aaKnown RBP20.52■□□□□ 0.88
AP002008.2-203ENST00000528953 UBAC1Q9BSL1 405 aa20.52■□□□□ 0.88
AP002008.2-203ENST00000528953 LRRC37A2A6NM11 1700 aa20.52■□□□□ 0.88
AP002008.2-203ENST00000528953 RAD50Q92878 1312 aa20.52■□□□□ 0.87
AP002008.2-203ENST00000528953 PDE4DQ08499 809 aa20.51■□□□□ 0.87
AP002008.2-203ENST00000528953 CDC37Q16543 378 aaPredicted RBP20.51■□□□□ 0.87
AP002008.2-203ENST00000528953 USH1GQ495M9 461 aa20.51■□□□□ 0.87
AP002008.2-203ENST00000528953 MFSD5Q6N075 450 aa20.51■□□□□ 0.87
AP002008.2-203ENST00000528953 SLC43A3Q8NBI5 491 aa20.51■□□□□ 0.87
AP002008.2-203ENST00000528953 RGS22Q8NE09 1264 aa20.51■□□□□ 0.87
AP002008.2-203ENST00000528953 DNERQ8NFT8 737 aa20.51■□□□□ 0.87
AP002008.2-203ENST00000528953 WDR11Q9BZH6 1224 aa20.51■□□□□ 0.87
AP002008.2-203ENST00000528953 LCTP09848 1927 aa20.51■□□□□ 0.87
AP002008.2-203ENST00000528953 RBM47A0AV96 593 aaKnown RBP20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 CD4P01730 458 aa20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 PARP1P09874 1014 aaKnown RBP20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 EDNRBP24530 442 aa20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 IRX6P78412 446 aaPredicted RBP20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 ITGA7Q13683 1181 aa20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 ADGRF4Q8IZF3 695 aa20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 RUFY2Q8WXA3 655 aa20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 FAM161BQ96MY7 647 aa20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 GUCD1Q96NT3 240 aa20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 SEZ6LQ9BYH1 1024 aa20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 COL6A3P12111 3177 aa20.5■□□□□ 0.87
AP002008.2-203ENST00000528953 B4DLN1 442 aa20.49■□□□□ 0.87
AP002008.2-203ENST00000528953 MRPL12P52815 198 aaKnown RBP20.49■□□□□ 0.87
AP002008.2-203ENST00000528953 PPIGQ13427 754 aaKnown RBP eCLIP20.49■□□□□ 0.87
AP002008.2-203ENST00000528953 MAF1Q9H063 256 aa20.49■□□□□ 0.87
AP002008.2-203ENST00000528953 ABCB11O95342 1321 aa20.49■□□□□ 0.87
AP002008.2-203ENST00000528953 DHX16O60231 1041 aaKnown RBP20.48■□□□□ 0.87
AP002008.2-203ENST00000528953 QRICH1Q2TAL8 776 aa20.48■□□□□ 0.87
AP002008.2-203ENST00000528953 IFIT1BQ5T764 474 aaKnown RBP20.48■□□□□ 0.87
AP002008.2-203ENST00000528953 TMEM199Q8N511 208 aa20.48■□□□□ 0.87
AP002008.2-203ENST00000528953 PPP1R12CQ9BZL4 782 aa20.48■□□□□ 0.87
AP002008.2-203ENST00000528953 GRIN2DO15399 1336 aa20.48■□□□□ 0.87
AP002008.2-203ENST00000528953 CHMLP26374 656 aa20.47■□□□□ 0.87
AP002008.2-203ENST00000528953 CPT1AP50416 773 aa20.47■□□□□ 0.87
AP002008.2-203ENST00000528953 PSMC6P62333 389 aa20.47■□□□□ 0.87
AP002008.2-203ENST00000528953 TRDNQ13061 729 aa20.47■□□□□ 0.87
AP002008.2-203ENST00000528953 PPP2R5BQ15173 497 aa20.47■□□□□ 0.87
AP002008.2-203ENST00000528953 OR6J1Q8NGC5 347 aa20.47■□□□□ 0.87
AP002008.2-203ENST00000528953 SCFD2Q8WU76 684 aa20.47■□□□□ 0.87
AP002008.2-203ENST00000528953 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.47■□□□□ 0.87
AP002008.2-203ENST00000528953 POLR3EQ9NVU0 708 aa20.47■□□□□ 0.87
AP002008.2-203ENST00000528953 LAMA2P24043 3122 aaKnown RBP20.47■□□□□ 0.87
AP002008.2-203ENST00000528953 NKRFO15226 690 aaKnown RBP eCLIP20.46■□□□□ 0.87
AP002008.2-203ENST00000528953 CSF2RAP15509 400 aa20.46■□□□□ 0.87
AP002008.2-203ENST00000528953 SEC23AQ15436 765 aa20.46■□□□□ 0.87
AP002008.2-203ENST00000528953 MCF2L2Q86YR7 1114 aa20.46■□□□□ 0.87
AP002008.2-203ENST00000528953 SEMA6BQ9H3T3 888 aa20.46■□□□□ 0.87
AP002008.2-203ENST00000528953 JMJD4Q9H9V9 463 aa20.46■□□□□ 0.87
AP002008.2-203ENST00000528953 U3KPZ7 1027 aaPredicted RBP20.46■□□□□ 0.87
AP002008.2-203ENST00000528953 CYP2C18P33260 490 aa20.45■□□□□ 0.86
AP002008.2-203ENST00000528953 BRDTQ58F21 947 aaPredicted RBP20.45■□□□□ 0.86
AP002008.2-203ENST00000528953 CYB5R4Q7L1T6 521 aa20.45■□□□□ 0.86
AP002008.2-203ENST00000528953 C16orf59Q7L2K0 433 aa20.45■□□□□ 0.86
AP002008.2-203ENST00000528953 FBXO11Q86XK2 927 aa20.45■□□□□ 0.86
AP002008.2-203ENST00000528953 SYTL5Q8TDW5 730 aaPredicted RBP20.45■□□□□ 0.86
AP002008.2-203ENST00000528953 TRPV6Q9H1D0 765 aa20.45■□□□□ 0.86
AP002008.2-203ENST00000528953 HIPK3Q9H422 1215 aa20.45■□□□□ 0.86
AP002008.2-203ENST00000528953 VAT1LQ9HCJ6 419 aa20.45■□□□□ 0.86
AP002008.2-203ENST00000528953 MRPL11Q9Y3B7 192 aaKnown RBP20.45■□□□□ 0.86
AP002008.2-203ENST00000528953 B4GALT4O60513 344 aa20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 MYL3P08590 195 aa20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 CYP21A2P08686 494 aa20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 PURAQ00577 322 aaKnown RBP20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 PTH1RQ03431 593 aa20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 TMEM240Q5SV17 173 aa20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 PSRC1Q6PGN9 363 aaPredicted RBP20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 STAG2Q8N3U4 1231 aa20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 TBC1D5Q92609 795 aa20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 ALDH8A1Q9H2A2 487 aaPredicted RBP20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 TTYH1Q9H313 450 aaPredicted RBP20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 GPHNQ9NQX3 736 aaPredicted RBP20.44■□□□□ 0.86
AP002008.2-203ENST00000528953 TMEM265A0A087WTH1 108 aa20.43■□□□□ 0.86
AP002008.2-203ENST00000528953 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.43■□□□□ 0.86
AP002008.2-203ENST00000528953 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.43■□□□□ 0.86
AP002008.2-203ENST00000528953 KLRF2D3W0D1 207 aa20.43■□□□□ 0.86
AP002008.2-203ENST00000528953 SGSM2O43147 1006 aa20.43■□□□□ 0.86
AP002008.2-203ENST00000528953 TXNP10599 105 aaKnown RBP20.43■□□□□ 0.86
AP002008.2-203ENST00000528953 TTLL4Q14679 1199 aa20.43■□□□□ 0.86
AP002008.2-203ENST00000528953 NSUN6Q8TEA1 469 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms