RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	SMPD1	P17405	629 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	ACLY	P53396	1101 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	GJA9	P57773	515 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	NKX3-2	P78367	333 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	TNFAIP2	Q03169	654 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	PWP2	Q15269	919 aa	Known RBP	13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	TRIM60	Q495X7	471 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	RNF20	Q5VTR2	975 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	ZNF654	Q8IZM8	581 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	TMEM87B	Q96K49	555 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	GDF15	Q99988	308 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	TSEN34	Q9BSV6	310 aa	Known RBP	13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	MYL10	Q9BUA6	226 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	RIOX1	Q9H6W3	641 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	COL20A1	Q9P218	1284 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	ATP11B	Q9Y2G3	1177 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	FRMPD3	Q5JV73	1810 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	MOXD2P	A6NHM9	499 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	MAGEA10	P43363	369 aa	Predicted RBP	13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	KCNA10	Q16322	511 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	TMEM63B	Q5T3F8	832 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	C1orf53	Q5VUE5	145 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	NOL8	Q76FK4	1167 aa	Known RBP	13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	TLK2	Q86UE8	772 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	HOMER1	Q86YM7	354 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	RASEF	Q8IZ41	740 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	DNER	Q8NFT8	737 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	NUP133	Q8WUM0	1156 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	PIGS	Q96S52	555 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	AMN	Q9BXJ7	453 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	LRRC2	Q9BYS8	371 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	MAF1	Q9H063	256 aa		13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	MRPL11	Q9Y3B7	192 aa	Known RBP	13.67	□□□□□ -0.22
PSMC3-205	ENST00000528362	LIFR	P42702	1097 aa		13.66	□□□□□ -0.22
PSMC3-205	ENST00000528362	TSGA10IP	Q3SY00	556 aa		13.66	□□□□□ -0.22
PSMC3-205	ENST00000528362	GNAS	Q5JWF2	1037 aa		13.66	□□□□□ -0.22
PSMC3-205	ENST00000528362	IQSEC1	Q6DN90	963 aa		13.66	□□□□□ -0.22
PSMC3-205	ENST00000528362	NFXL1	Q6ZNB6	911 aa		13.66	□□□□□ -0.22
PSMC3-205	ENST00000528362	MCF2L2	Q86YR7	1114 aa		13.66	□□□□□ -0.22
PSMC3-205	ENST00000528362	MAP3K14	Q99558	947 aa		13.66	□□□□□ -0.22
PSMC3-205	ENST00000528362	SPC25	Q9HBM1	224 aa		13.66	□□□□□ -0.22
PSMC3-205	ENST00000528362	PPP4R2	Q9NY27	417 aa		13.66	□□□□□ -0.22
PSMC3-205	ENST00000528362	PCDHA1	Q9Y5I3	950 aa		13.66	□□□□□ -0.22
PSMC3-205	ENST00000528362	ALPK3	Q96L96	1907 aa		13.66	□□□□□ -0.22
PSMC3-205	ENST00000528362	PLXNA1	Q9UIW2	1896 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	TRIOBP	Q9H2D6	2365 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	RBM47	A0AV96	593 aa	Known RBP	13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	DYNC1LI2	O43237	492 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	ASGR1	P07306	291 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	HSD17B4	P51659	736 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	BEX3	Q00994	111 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	GHRHR	Q02643	423 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	TLE2	Q04725	743 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	PDE4D	Q08499	809 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	ADCK5	Q3MIX3	580 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	ERICH6B	Q5W0A0	696 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	TMTC2	Q8N394	836 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	PCSK9	Q8NBP7	692 aa	Known RBP	13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	CTCFL	Q8NI51	663 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	NEK1	Q96PY6	1258 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	TAAR1	Q96RJ0	339 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	WDR11	Q9BZH6	1224 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	STARD7	Q9NQZ5	370 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	PDLIM7	Q9NR12	457 aa		13.65	□□□□□ -0.22
PSMC3-205	ENST00000528362	PNMA6F	A0A0J9YX94	578 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	CCDC69	A6NI79	296 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	PLEKHA8P1	O95397	391 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	CFB	P00751	764 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	CENPB	P07199	599 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	RXRA	P19793	462 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	KIF5B	P33176	963 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	BMP8B	P34820	402 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	EXOSC10	Q01780	885 aa	Known RBP	13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	FSCN1	Q16658	493 aa	Known RBP	13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	DUSP28	Q4G0W2	176 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	SGMS1	Q86VZ5	419 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	RAB11FIP4	Q86YS3	637 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	NSUN6	Q8TEA1	469 aa	Known RBP	13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	PIBF1	Q8WXW3	757 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	KCNB2	Q92953	911 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	TCEANC2	Q96MN5	208 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	RMDN3	Q96TC7	470 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	SPZ1	Q9BXG8	430 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362		Q9Y3F1	56 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	SZT2	Q5T011	3432 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362	ELP1	O95163	1332 aa		13.64	□□□□□ -0.23
PSMC3-205	ENST00000528362		A0A1W2PPC1	479 aa		13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	TRIM43B	A6NCK2	446 aa		13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	PQBP1	O60828	265 aa	Known RBP	13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	MDM2	Q00987	491 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	KRT32	Q14532	448 aa		13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	DHX32	Q7L7V1	743 aa	Known RBP	13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	ANKRD33	Q7Z3H0	272 aa		13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	SH3RF1	Q7Z6J0	888 aa		13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	SRBD1	Q8N5C6	995 aa	Known RBP	13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	GLT1D1	Q96MS3	346 aa		13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	MPHOSPH6	Q99547	160 aa	Known RBP	13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms