RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 CCDC144CPQ8IYA2 1237 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 KCTD17Q8N5Z5 321 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 CHST13Q8NET6 341 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 GPKOWQ92917 476 aaPredicted RBP eCLIP9.02□□□□□ -0.97
SORL1-207ENST00000528339 KCNJ14Q9UNX9 436 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 DIS3Q9Y2L1 958 aaKnown RBP9.02□□□□□ -0.97
SORL1-207ENST00000528339 PPP1R12BO60237 982 aaPredicted RBP9.02□□□□□ -0.97
SORL1-207ENST00000528339 DTNBO60941 627 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 COPB2P35606 906 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 SLC16A2P36021 539 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 TMEM119Q4V9L6 283 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 OTUD7BQ6GQQ9 843 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 FASTKD5Q7L8L6 764 aaKnown RBP9.02□□□□□ -0.97
SORL1-207ENST00000528339 FAM43AQ8N2R8 423 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 EMID1Q96A84 441 aaPredicted RBP9.02□□□□□ -0.97
SORL1-207ENST00000528339 RABGAP1Q9Y3P9 1069 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 A0A087X0B3 334 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 MEIS1O00470 390 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 SARSP49591 514 aaKnown RBP9.01□□□□□ -0.97
SORL1-207ENST00000528339 HMGCS2P54868 508 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 SNAPC2Q13487 334 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 ATG4CQ96DT6 458 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 GJD2Q9UKL4 321 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 PCDHB6Q9Y5E3 794 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 DNM1Q05193 864 aaKnown RBP9.01□□□□□ -0.97
SORL1-207ENST00000528339 NAALADL2Q58DX5 795 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 ADALQ6DHV7 355 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 SYTL5Q8TDW5 730 aaPredicted RBP9.01□□□□□ -0.97
SORL1-207ENST00000528339 INPP4AQ96PE3 977 aaPredicted RBP9.01□□□□□ -0.97
SORL1-207ENST00000528339 ELP3Q9H9T3 547 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 SAGE1Q9NXZ1 904 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 NFASCO94856 1347 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 TSC2P49815 1807 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 PSMD10O75832 226 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 HOXC8P31273 242 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 HERVK_113P62684 666 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 PPP2R5CQ13362 524 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 ANO1Q5XXA6 986 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 PDXDC2PQ6P474 469 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 NFXL1Q6ZNB6 911 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 KRT25Q7Z3Z0 450 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 IFNL1Q8IU54 200 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 TRIM22Q8IYM9 498 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 DNERQ8NFT8 737 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 TIGD1Q96MW7 591 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 FTOQ9C0B1 505 aaKnown RBP eCLIP9.01□□□□□ -0.97
SORL1-207ENST00000528339 BCL11AQ9H165 835 aa9.01□□□□□ -0.97
SORL1-207ENST00000528339 CETPP11597 493 aa9□□□□□ -0.97
SORL1-207ENST00000528339 MUTP22033 750 aa9□□□□□ -0.97
SORL1-207ENST00000528339 NFKBIBQ15653 356 aa9□□□□□ -0.97
SORL1-207ENST00000528339 KLHL40Q2TBA0 621 aa9□□□□□ -0.97
SORL1-207ENST00000528339 Q3C1V9 767 aa9□□□□□ -0.97
SORL1-207ENST00000528339 AGBL1Q96MI9 1066 aa9□□□□□ -0.97
SORL1-207ENST00000528339 MTRQ99707 1265 aa9□□□□□ -0.97
SORL1-207ENST00000528339 CNPY2Q9Y2B0 182 aa9□□□□□ -0.97
SORL1-207ENST00000528339 FRMD3A2A2Y4 597 aa9□□□□□ -0.97
SORL1-207ENST00000528339 FAM86B1E9PN63 330 aa9□□□□□ -0.97
SORL1-207ENST00000528339 SLC37A4O43826 429 aa9□□□□□ -0.97
SORL1-207ENST00000528339 STAM2O75886 525 aa9□□□□□ -0.97
SORL1-207ENST00000528339 FAM86B2P0C5J1 330 aa9□□□□□ -0.97
SORL1-207ENST00000528339 INHBEP58166 350 aa9□□□□□ -0.97
SORL1-207ENST00000528339 RGMBQ6NW40 437 aa9□□□□□ -0.97
SORL1-207ENST00000528339 SYNE3Q6ZMZ3 975 aa9□□□□□ -0.97
SORL1-207ENST00000528339 FBXO11Q86XK2 927 aa9□□□□□ -0.97
SORL1-207ENST00000528339 MSL3Q8N5Y2 521 aaKnown RBP9□□□□□ -0.97
SORL1-207ENST00000528339 DNAJC5GQ8N7S2 189 aa9□□□□□ -0.97
SORL1-207ENST00000528339 COA7Q96BR5 231 aa9□□□□□ -0.97
SORL1-207ENST00000528339 DDX11Q96FC9 970 aa9□□□□□ -0.97
SORL1-207ENST00000528339 HOXC10Q9NYD6 342 aa9□□□□□ -0.97
SORL1-207ENST00000528339 SOWAHBA6NEL2 793 aa9□□□□□ -0.97
SORL1-207ENST00000528339 NFIBO00712 420 aa9□□□□□ -0.97
SORL1-207ENST00000528339 ACTN4O43707 911 aaKnown RBP9□□□□□ -0.97
SORL1-207ENST00000528339 GCFC2P16383 781 aaKnown RBP9□□□□□ -0.97
SORL1-207ENST00000528339 GRIN1Q05586 938 aa9□□□□□ -0.97
SORL1-207ENST00000528339 PDIA5Q14554 519 aa9□□□□□ -0.97
SORL1-207ENST00000528339 FAM110CQ1W6H9 321 aa9□□□□□ -0.97
SORL1-207ENST00000528339 SLC30A10Q6XR72 485 aa9□□□□□ -0.97
SORL1-207ENST00000528339 ZSCAN29Q8IWY8 852 aaPredicted RBP9□□□□□ -0.97
SORL1-207ENST00000528339 BICD2Q8TD16 824 aa9□□□□□ -0.97
SORL1-207ENST00000528339 CCDC12Q8WUD4 166 aaPredicted RBP9□□□□□ -0.97
SORL1-207ENST00000528339 TMEM60Q9H2L4 133 aa9□□□□□ -0.97
SORL1-207ENST00000528339 PXMP2Q9NR77 195 aa9□□□□□ -0.97
SORL1-207ENST00000528339 PICK1Q9NRD5 415 aa9□□□□□ -0.97
SORL1-207ENST00000528339 TMEM260Q9NX78 707 aa9□□□□□ -0.97
SORL1-207ENST00000528339 PCDHA7Q9UN72 937 aa9□□□□□ -0.97
SORL1-207ENST00000528339 KIF3AQ9Y496 699 aa9□□□□□ -0.97
SORL1-207ENST00000528339 FSD2A1L4K1 749 aa8.99□□□□□ -0.97
SORL1-207ENST00000528339 SMCO2A6NFE2 343 aa8.99□□□□□ -0.97
SORL1-207ENST00000528339 MANSC4A6NHS7 340 aaPredicted RBP8.99□□□□□ -0.97
SORL1-207ENST00000528339 GADD45BO75293 160 aaPredicted RBP8.99□□□□□ -0.97
SORL1-207ENST00000528339 FOSP01100 380 aaPredicted RBP8.99□□□□□ -0.97
SORL1-207ENST00000528339 TAL1P17542 331 aaPredicted RBP8.99□□□□□ -0.97
SORL1-207ENST00000528339 CMA1P23946 247 aa8.99□□□□□ -0.97
SORL1-207ENST00000528339 ADCY7P51828 1080 aa8.99□□□□□ -0.97
SORL1-207ENST00000528339 TRAF1Q13077 416 aa8.99□□□□□ -0.97
SORL1-207ENST00000528339 PGM5Q15124 567 aa8.99□□□□□ -0.97
SORL1-207ENST00000528339 TBC1D5Q92609 795 aa8.99□□□□□ -0.97
SORL1-207ENST00000528339 CCSER1Q9C0I3 900 aa8.99□□□□□ -0.97
SORL1-207ENST00000528339 GPCPD1Q9NPB8 672 aa8.99□□□□□ -0.97
SORL1-207ENST00000528339 LYPLA2O95372 231 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms