RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 KCNK18Q7Z418 384 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 SEMA6BQ9H3T3 888 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 MMRN2Q9H8L6 949 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 MLXIPQ9HAP2 919 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 CD209Q9NNX6 404 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 LRWD1Q9UFC0 647 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 SEC63Q9UGP8 760 aaKnown RBP8.33□□□□□ -1.08
C11orf54-207ENST00000528288 CCDC151A5D8V7 595 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 MYMKA6NI61 221 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 LRRIQ3A6PVS8 624 aaPredicted RBP8.33□□□□□ -1.08
C11orf54-207ENST00000528288 RHOBTB3O94955 611 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 TAL1P17542 331 aaPredicted RBP8.33□□□□□ -1.08
C11orf54-207ENST00000528288 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.33□□□□□ -1.08
C11orf54-207ENST00000528288 NEK8Q86SG6 692 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 CAGE1Q8TC20 777 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 RPGRQ92834 1020 aaKnown RBP8.33□□□□□ -1.08
C11orf54-207ENST00000528288 RRP36Q96EU6 259 aaKnown RBP8.33□□□□□ -1.08
C11orf54-207ENST00000528288 JADE2Q9NQC1 790 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 ADAM21Q9UKJ8 722 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 PDE2AO00408 941 aaPredicted RBP8.33□□□□□ -1.08
C11orf54-207ENST00000528288 SCNN1DP51172 638 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 SNAP25P60880 206 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 GTF2IP78347 998 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 AMPD2Q01433 879 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 C2orf54Q08AI8 447 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 GRAPQ13588 217 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 CT47A1Q5JQC4 288 aaPredicted RBP8.33□□□□□ -1.08
C11orf54-207ENST00000528288 DPP8Q6V1X1 898 aaPredicted RBP8.33□□□□□ -1.08
C11orf54-207ENST00000528288 TMC4Q7Z404 712 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 ZNF804AQ7Z570 1209 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 C2CD5Q86YS7 1000 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 GRAPLQ8TC17 118 aaPredicted RBP8.33□□□□□ -1.08
C11orf54-207ENST00000528288 IRS2Q9Y4H2 1338 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 ZNF263O14978 683 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 GNAQP50148 359 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 EZH2Q15910 746 aaKnown RBP8.32□□□□□ -1.08
C11orf54-207ENST00000528288 CCDC96Q2M329 555 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 TANGO6Q9C0B7 1094 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 C6orf50Q9HD87 102 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 SH3GLB2Q9NR46 395 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 CAPN11Q9UMQ6 739 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 PDS5AQ29RF7 1337 aaKnown RBP8.32□□□□□ -1.08
C11orf54-207ENST00000528288 SCN7AQ01118 1682 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 MPHOSPH10O00566 681 aaKnown RBP8.32□□□□□ -1.08
C11orf54-207ENST00000528288 PPARDQ03181 441 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 GRB10Q13322 594 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 CASP8Q14790 479 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 BRD3Q15059 726 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 ECM1Q16610 540 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 MIIPQ5JXC2 388 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 KCTD1Q719H9 257 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 REXO1Q8N1G1 1221 aaKnown RBP8.32□□□□□ -1.08
C11orf54-207ENST00000528288 CRACR2AQ9BSW2 395 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 UBXN6Q9BZV1 441 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 CCSER1Q9C0I3 900 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 ZMYND12Q9H0C1 365 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 NPHP3-ACAD11A0A0J9YXS1 232 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 NCK2O43639 380 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 SRGNP10124 158 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 AKR1B1P15121 316 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 FECHP22830 423 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 CCNE1P24864 410 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 CACNB3P54284 484 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 ARID5AQ03989 594 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 CALCRLQ16602 461 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 PTPROQ16827 1216 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 BARGINQ6ZT62 677 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 CDK5RAP3Q96JB5 506 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 DNAJC7Q99615 494 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 FGFBP2Q9BYJ0 223 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 ZHX3Q9H4I2 956 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 RABEP2Q9H5N1 569 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 NLRC4Q9NPP4 1024 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 POLLQ9UGP5 575 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 L1RE1Q9UN81 338 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 CNTNAP4Q9C0A0 1308 aa8.32□□□□□ -1.08
C11orf54-207ENST00000528288 ANKRD65E5RJM6 399 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 MARCH6O60337 910 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 MOCS3O95396 460 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 MYBL2P10244 700 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 EEF1GP26641 437 aaKnown RBP8.31□□□□□ -1.08
C11orf54-207ENST00000528288 DNM2P50570 870 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 PRR5LQ6MZQ0 368 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 FOXR1Q6PIV2 292 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 HDXQ7Z353 690 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 DNAAF5Q86Y56 855 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 NELFCDQ8IXH7 590 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 PNMA5Q96PV4 448 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 PYM1Q9BRP8 204 aaKnown RBP8.31□□□□□ -1.08
C11orf54-207ENST00000528288 TRIM34Q9BYJ4 488 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 THAP9Q9H5L6 903 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 ZNHIT6Q9NWK9 470 aaKnown RBP8.31□□□□□ -1.08
C11orf54-207ENST00000528288 SAR1BQ9Y6B6 198 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 EDIL3O43854 480 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 SLC7A5Q01650 507 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 TRIM14Q14142 442 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 TMED8Q6PL24 325 aaPredicted RBP8.31□□□□□ -1.08
C11orf54-207ENST00000528288 RRAGAQ7L523 313 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 CALML4Q96GE6 196 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms