RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 MPHOSPH6Q99547 160 aaKnown RBP38.47■■■■□ 3.75
SSSCA1-205ENST00000527920 GNEQ9Y223 722 aaKnown RBP38.47■■■■□ 3.75
SSSCA1-205ENST00000527920 ATP11BQ9Y2G3 1177 aa38.47■■■■□ 3.75
SSSCA1-205ENST00000527920 MRPL11Q9Y3B7 192 aaKnown RBP38.47■■■■□ 3.75
SSSCA1-205ENST00000527920 EDNRBP24530 442 aa38.46■■■■□ 3.75
SSSCA1-205ENST00000527920 MCM5P33992 734 aa38.46■■■■□ 3.75
SSSCA1-205ENST00000527920 MAGEA10P43363 369 aaPredicted RBP38.46■■■■□ 3.75
SSSCA1-205ENST00000527920 KCNA10Q16322 511 aa38.46■■■■□ 3.75
SSSCA1-205ENST00000527920 FBXO16Q8IX29 292 aaPredicted RBP38.46■■■■□ 3.75
SSSCA1-205ENST00000527920 MAP3K14Q99558 947 aa38.46■■■■□ 3.75
SSSCA1-205ENST00000527920 AMNQ9BXJ7 453 aa38.46■■■■□ 3.75
SSSCA1-205ENST00000527920 VAT1LQ9HCJ6 419 aa38.46■■■■□ 3.75
SSSCA1-205ENST00000527920 Q9Y3F1 56 aa38.46■■■■□ 3.75
SSSCA1-205ENST00000527920 C11orf97A0A1B0GVM6 126 aaPredicted RBP38.45■■■■□ 3.75
SSSCA1-205ENST00000527920 MYADML2A6NDP7 307 aa38.45■■■■□ 3.75
SSSCA1-205ENST00000527920 TRIM60Q495X7 471 aa38.45■■■■□ 3.75
SSSCA1-205ENST00000527920 RNF20Q5VTR2 975 aa38.45■■■■□ 3.75
SSSCA1-205ENST00000527920 TMEM87BQ96K49 555 aa38.45■■■■□ 3.75
SSSCA1-205ENST00000527920 LY9Q9HBG7 655 aa38.45■■■■□ 3.75
SSSCA1-205ENST00000527920 DDX49Q9Y6V7 483 aaKnown RBP38.45■■■■□ 3.75
SSSCA1-205ENST00000527920 B4DLN1 442 aa38.44■■■■□ 3.74
SSSCA1-205ENST00000527920 ZBTB5O15062 677 aa38.44■■■■□ 3.74
SSSCA1-205ENST00000527920 MRPL12P52815 198 aaKnown RBP38.44■■■■□ 3.74
SSSCA1-205ENST00000527920 TMTC2Q8N394 836 aa38.44■■■■□ 3.74
SSSCA1-205ENST00000527920 RIOX1Q9H6W3 641 aa38.44■■■■□ 3.74
SSSCA1-205ENST00000527920 CTAGE5O15320 804 aa38.43■■■■□ 3.74
SSSCA1-205ENST00000527920 PRC1O43663 620 aa38.43■■■■□ 3.74
SSSCA1-205ENST00000527920 PRKAG2Q9UGJ0 569 aa38.43■■■■□ 3.74
SSSCA1-205ENST00000527920 ELP1O95163 1332 aa38.42■■■■□ 3.74
SSSCA1-205ENST00000527920 DDAH1O94760 285 aa38.42■■■■□ 3.74
SSSCA1-205ENST00000527920 SMPD1P17405 629 aa38.42■■■■□ 3.74
SSSCA1-205ENST00000527920 TRAF1Q13077 416 aa38.42■■■■□ 3.74
SSSCA1-205ENST00000527920 EEPD1Q7L9B9 569 aa38.42■■■■□ 3.74
SSSCA1-205ENST00000527920 TLK2Q86UE8 772 aa38.42■■■■□ 3.74
SSSCA1-205ENST00000527920 STARD7Q9NQZ5 370 aa38.42■■■■□ 3.74
SSSCA1-205ENST00000527920 PDGFCQ9NRA1 345 aa38.42■■■■□ 3.74
SSSCA1-205ENST00000527920 RBM47A0AV96 593 aaKnown RBP38.41■■■■□ 3.74
SSSCA1-205ENST00000527920 GHRHRQ02643 423 aa38.41■■■■□ 3.74
SSSCA1-205ENST00000527920 GNASQ5JWF2 1037 aa38.41■■■■□ 3.74
SSSCA1-205ENST00000527920 NOL8Q76FK4 1167 aaKnown RBP38.41■■■■□ 3.74
SSSCA1-205ENST00000527920 ASGR1P07306 291 aa38.4■■■■□ 3.74
SSSCA1-205ENST00000527920 PDE4DQ08499 809 aa38.4■■■■□ 3.74
SSSCA1-205ENST00000527920 SLC35G1Q2M3R5 365 aa38.4■■■■□ 3.74
SSSCA1-205ENST00000527920 ZNF654Q8IZM8 581 aa38.4■■■■□ 3.74
SSSCA1-205ENST00000527920 SYTL5Q8TDW5 730 aaPredicted RBP38.4■■■■□ 3.74
SSSCA1-205ENST00000527920 GLT1D1Q96MS3 346 aa38.4■■■■□ 3.74
SSSCA1-205ENST00000527920 SH2B2O14492 632 aaPredicted RBP38.39■■■■□ 3.74
SSSCA1-205ENST00000527920 LIFRP42702 1097 aa38.39■■■■□ 3.74
SSSCA1-205ENST00000527920 DUSP28Q4G0W2 176 aa38.39■■■■□ 3.74
SSSCA1-205ENST00000527920 AP5M1Q9H0R1 490 aa38.39■■■■□ 3.74
SSSCA1-205ENST00000527920 PPP1R11O60927 126 aaPredicted RBP38.38■■■■□ 3.73
SSSCA1-205ENST00000527920 IRX5P78411 483 aaPredicted RBP38.38■■■■□ 3.73
SSSCA1-205ENST00000527920 TLE2Q04725 743 aa38.38■■■■□ 3.73
SSSCA1-205ENST00000527920 ANKRD33Q7Z3H0 272 aa38.38■■■■□ 3.73
SSSCA1-205ENST00000527920 SAMD3Q8N6K7 520 aa38.38■■■■□ 3.73
SSSCA1-205ENST00000527920 TOX2Q96NM4 488 aa38.38■■■■□ 3.73
SSSCA1-205ENST00000527920 PDLIM7Q9NR12 457 aa38.38■■■■□ 3.73
SSSCA1-205ENST00000527920 MAP3K20Q9NYL2 800 aaKnown RBP38.38■■■■□ 3.73
SSSCA1-205ENST00000527920 CYTH3O43739 400 aa38.37■■■■□ 3.73
SSSCA1-205ENST00000527920 TSGA10IPQ3SY00 556 aa38.37■■■■□ 3.73
SSSCA1-205ENST00000527920 NSUN6Q8TEA1 469 aaKnown RBP38.37■■■■□ 3.73
SSSCA1-205ENST00000527920 TBC1D5Q92609 795 aa38.37■■■■□ 3.73
SSSCA1-205ENST00000527920 LBHD1Q9BQE6 289 aaPredicted RBP38.37■■■■□ 3.73
SSSCA1-205ENST00000527920 GPHNQ9NQX3 736 aaPredicted RBP38.37■■■■□ 3.73
SSSCA1-205ENST00000527920 KIF5BP33176 963 aa38.36■■■■□ 3.73
SSSCA1-205ENST00000527920 HSD17B4P51659 736 aa38.36■■■■□ 3.73
SSSCA1-205ENST00000527920 FSCN1Q16658 493 aaKnown RBP38.36■■■■□ 3.73
SSSCA1-205ENST00000527920 CTCFLQ8NI51 663 aaPredicted RBP38.36■■■■□ 3.73
SSSCA1-205ENST00000527920 WDR11Q9BZH6 1224 aa38.36■■■■□ 3.73
SSSCA1-205ENST00000527920 PCDHA1Q9Y5I3 950 aa38.36■■■■□ 3.73
SSSCA1-205ENST00000527920 OPLAHO14841 1288 aa38.35■■■■□ 3.73
SSSCA1-205ENST00000527920 DYNC1LI2O43237 492 aaPredicted RBP38.35■■■■□ 3.73
SSSCA1-205ENST00000527920 CABYRO75952 493 aa38.35■■■■□ 3.73
SSSCA1-205ENST00000527920 SMARCA1P28370 1054 aa38.35■■■■□ 3.73
SSSCA1-205ENST00000527920 IWS1Q96ST2 819 aa38.35■■■■□ 3.73
SSSCA1-205ENST00000527920 UBE2OQ9C0C9 1292 aaKnown RBP38.35■■■■□ 3.73
SSSCA1-205ENST00000527920 COL20A1Q9P218 1284 aa38.35■■■■□ 3.73
SSSCA1-205ENST00000527920 MYH6P13533 1939 aa38.35■■■■□ 3.73
SSSCA1-205ENST00000527920 PNMA6FA0A0J9YX94 578 aa38.34■■■■□ 3.73
SSSCA1-205ENST00000527920 COL9A3Q14050 684 aaPredicted RBP38.34■■■■□ 3.73
SSSCA1-205ENST00000527920 HOMER1Q86YM7 354 aa38.34■■■■□ 3.73
SSSCA1-205ENST00000527920 SCFD2Q8WU76 684 aa38.34■■■■□ 3.73
SSSCA1-205ENST00000527920 PIGSQ96S52 555 aa38.34■■■■□ 3.73
SSSCA1-205ENST00000527920 LZTS2Q9BRK4 669 aa38.34■■■■□ 3.73
SSSCA1-205ENST00000527920 SPZ1Q9BXG8 430 aa38.34■■■■□ 3.73
SSSCA1-205ENST00000527920 MROH7Q68CQ1 1323 aa38.34■■■■□ 3.73
SSSCA1-205ENST00000527920 NKRFO15226 690 aaKnown RBP eCLIP38.33■■■■□ 3.733e-6■□□□□ 8.1
SSSCA1-205ENST00000527920 ZEB2O60315 1214 aa38.33■■■■□ 3.73
SSSCA1-205ENST00000527920 CALM1P0DP23 149 aa38.33■■■■□ 3.73
SSSCA1-205ENST00000527920 CALM2P0DP24 149 aa38.33■■■■□ 3.73
SSSCA1-205ENST00000527920 CALM3P0DP25 149 aa38.33■■■■□ 3.73
SSSCA1-205ENST00000527920 MDM2Q00987 491 aaPredicted RBP38.33■■■■□ 3.73
SSSCA1-205ENST00000527920 NFXL1Q6ZNB6 911 aa38.33■■■■□ 3.73
SSSCA1-205ENST00000527920 TAAR1Q96RJ0 339 aa38.33■■■■□ 3.73
SSSCA1-205ENST00000527920 RMDN3Q96TC7 470 aa38.33■■■■□ 3.73
SSSCA1-205ENST00000527920 A0A0U1RQG5 324 aaPredicted RBP38.32■■■■□ 3.72
SSSCA1-205ENST00000527920 CCDC69A6NI79 296 aa38.32■■■■□ 3.72
SSSCA1-205ENST00000527920 CLTBP09497 229 aa38.32■■■■□ 3.72
SSSCA1-205ENST00000527920 GNAQP50148 359 aa38.32■■■■□ 3.72
SSSCA1-205ENST00000527920 BEX3Q00994 111 aa38.32■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms