RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 VTA1Q9NP79 307 aa18.76■□□□□ 0.59
CTSB-213ENST00000527215 LOC102724159A0A0B4J2E5 919 aa18.75■□□□□ 0.59
CTSB-213ENST00000527215 MOXD2PA6NHM9 499 aa18.75■□□□□ 0.59
CTSB-213ENST00000527215 MDM2Q00987 491 aaPredicted RBP18.75■□□□□ 0.59
CTSB-213ENST00000527215 NECTIN1Q15223 517 aa18.75■□□□□ 0.59
CTSB-213ENST00000527215 PWP2Q15269 919 aaKnown RBP18.75■□□□□ 0.59
CTSB-213ENST00000527215 LRIT3Q3SXY7 679 aa18.75■□□□□ 0.59
CTSB-213ENST00000527215 CREB3L3Q68CJ9 461 aa18.75■□□□□ 0.59
CTSB-213ENST00000527215 RGS22Q8NE09 1264 aa18.75■□□□□ 0.59
CTSB-213ENST00000527215 IGDCC4Q8TDY8 1250 aa18.75■□□□□ 0.59
CTSB-213ENST00000527215 LRCH3Q96II8 777 aa18.75■□□□□ 0.59
CTSB-213ENST00000527215 PRKAG2Q9UGJ0 569 aa18.75■□□□□ 0.59
CTSB-213ENST00000527215 GNEQ9Y223 722 aaKnown RBP18.75■□□□□ 0.59
CTSB-213ENST00000527215 MYH7BA7E2Y1 1941 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 CTAGE5O15320 804 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 PRC1O43663 620 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 CDC45O75419 566 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 ASGR1P07306 291 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 SMPD1P17405 629 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 PTGS1P23219 599 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 TROAPQ12815 778 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 GNASQ5JWF2 1037 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 IQSEC1Q6DN90 963 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 TLK2Q86UE8 772 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 PCSK9Q8NBP7 692 aaKnown RBP18.74■□□□□ 0.59
CTSB-213ENST00000527215 NUP133Q8WUM0 1156 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 TBC1D5Q92609 795 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 MTMR8Q96EF0 704 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 GPHNQ9NQX3 736 aaPredicted RBP18.74■□□□□ 0.59
CTSB-213ENST00000527215 STARD7Q9NQZ5 370 aa18.74■□□□□ 0.59
CTSB-213ENST00000527215 SZT2Q5T011 3432 aa18.73■□□□□ 0.59
CTSB-213ENST00000527215 BEX3Q00994 111 aa18.73■□□□□ 0.59
CTSB-213ENST00000527215 TLE2Q04725 743 aa18.73■□□□□ 0.59
CTSB-213ENST00000527215 PDE4DQ08499 809 aa18.73■□□□□ 0.59
CTSB-213ENST00000527215 COL9A3Q14050 684 aaPredicted RBP18.73■□□□□ 0.59
CTSB-213ENST00000527215 SLC35G1Q2M3R5 365 aa18.73■□□□□ 0.59
CTSB-213ENST00000527215 TMEM63BQ5T3F8 832 aa18.73■□□□□ 0.59
CTSB-213ENST00000527215 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
CTSB-213ENST00000527215 CATIPQ7Z7H3 387 aa18.73■□□□□ 0.59
CTSB-213ENST00000527215 DNERQ8NFT8 737 aa18.73■□□□□ 0.59
CTSB-213ENST00000527215 MPHOSPH6Q99547 160 aaKnown RBP18.73■□□□□ 0.59
CTSB-213ENST00000527215 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
CTSB-213ENST00000527215 AMNQ9BXJ7 453 aa18.73■□□□□ 0.59
CTSB-213ENST00000527215 LY9Q9HBG7 655 aa18.73■□□□□ 0.59
CTSB-213ENST00000527215 PRDM5Q9NQX1 630 aaPredicted RBP18.73■□□□□ 0.59
CTSB-213ENST00000527215 MRPL11Q9Y3B7 192 aaKnown RBP18.73■□□□□ 0.59
CTSB-213ENST00000527215 ZBTB5O15062 677 aa18.72■□□□□ 0.59
CTSB-213ENST00000527215 PPP1R11O60927 126 aaPredicted RBP18.72■□□□□ 0.59
CTSB-213ENST00000527215 NEFLP07196 543 aa18.72■□□□□ 0.59
CTSB-213ENST00000527215 EDNRBP24530 442 aa18.72■□□□□ 0.59
CTSB-213ENST00000527215 MCM5P33992 734 aa18.72■□□□□ 0.59
CTSB-213ENST00000527215 NKX3-2P78367 333 aa18.72■□□□□ 0.59
CTSB-213ENST00000527215 SH3RF1Q7Z6J0 888 aa18.72■□□□□ 0.59
CTSB-213ENST00000527215 HOMER1Q86YM7 354 aa18.72■□□□□ 0.59
CTSB-213ENST00000527215 MCF2L2Q86YR7 1114 aa18.72■□□□□ 0.59
CTSB-213ENST00000527215 GLT1D1Q96MS3 346 aa18.72■□□□□ 0.59
CTSB-213ENST00000527215 MAF1Q9H063 256 aa18.72■□□□□ 0.59
CTSB-213ENST00000527215 PDLIM7Q9NR12 457 aa18.72■□□□□ 0.59
CTSB-213ENST00000527215 DYNC1LI2O43237 492 aaPredicted RBP18.71■□□□□ 0.59
CTSB-213ENST00000527215 PQBP1O60828 265 aaKnown RBP18.71■□□□□ 0.59
CTSB-213ENST00000527215 ZNF654Q8IZM8 581 aa18.71■□□□□ 0.59
CTSB-213ENST00000527215 SYTL5Q8TDW5 730 aaPredicted RBP18.71■□□□□ 0.59
CTSB-213ENST00000527215 TAAR1Q96RJ0 339 aa18.71■□□□□ 0.59
CTSB-213ENST00000527215 PIGSQ96S52 555 aa18.71■□□□□ 0.59
CTSB-213ENST00000527215 MTA3Q9BTC8 594 aa18.71■□□□□ 0.59
CTSB-213ENST00000527215 MYL10Q9BUA6 226 aa18.71■□□□□ 0.59
CTSB-213ENST00000527215 AP5M1Q9H0R1 490 aa18.71■□□□□ 0.59
CTSB-213ENST00000527215 RIOX1Q9H6W3 641 aa18.71■□□□□ 0.59
CTSB-213ENST00000527215 COL20A1Q9P218 1284 aa18.71■□□□□ 0.59
CTSB-213ENST00000527215 LAMA3Q16787 3333 aa18.71■□□□□ 0.58
CTSB-213ENST00000527215 RBM47A0AV96 593 aaKnown RBP18.7■□□□□ 0.58
CTSB-213ENST00000527215 B4DLN1 442 aa18.7■□□□□ 0.58
CTSB-213ENST00000527215 SH2B2O14492 632 aaPredicted RBP18.7■□□□□ 0.58
CTSB-213ENST00000527215 CYTH3O43739 400 aa18.7■□□□□ 0.58
CTSB-213ENST00000527215 MRPL12P52815 198 aaKnown RBP18.7■□□□□ 0.58
CTSB-213ENST00000527215 FSCN1Q16658 493 aaKnown RBP18.7■□□□□ 0.58
CTSB-213ENST00000527215 DUSP28Q4G0W2 176 aa18.7■□□□□ 0.58
CTSB-213ENST00000527215 RNF20Q5VTR2 975 aa18.7■□□□□ 0.58
CTSB-213ENST00000527215 VTI1AQ96AJ9 217 aa18.7■□□□□ 0.58
CTSB-213ENST00000527215 TMEM87BQ96K49 555 aa18.7■□□□□ 0.58
CTSB-213ENST00000527215 WDR11Q9BZH6 1224 aa18.7■□□□□ 0.58
CTSB-213ENST00000527215 Q9Y3F1 56 aa18.7■□□□□ 0.58
CTSB-213ENST00000527215 PCDHA1Q9Y5I3 950 aa18.7■□□□□ 0.58
CTSB-213ENST00000527215 ELP1O95163 1332 aa18.7■□□□□ 0.58
CTSB-213ENST00000527215 TRIM43BA6NCK2 446 aa18.69■□□□□ 0.58
CTSB-213ENST00000527215 OPLAHO14841 1288 aa18.69■□□□□ 0.58
CTSB-213ENST00000527215 DDAH1O94760 285 aa18.69■□□□□ 0.58
CTSB-213ENST00000527215 CFBP00751 764 aa18.69■□□□□ 0.58
CTSB-213ENST00000527215 CLTBP09497 229 aa18.69■□□□□ 0.58
CTSB-213ENST00000527215 NFXL1Q6ZNB6 911 aa18.69■□□□□ 0.58
CTSB-213ENST00000527215 ANKRD33Q7Z3H0 272 aa18.69■□□□□ 0.58
CTSB-213ENST00000527215 DEFB123Q8N688 67 aa18.69■□□□□ 0.58
CTSB-213ENST00000527215 TRIM43Q96BQ3 446 aaPredicted RBP18.69■□□□□ 0.58
CTSB-213ENST00000527215 A0A0U1RQG5 324 aaPredicted RBP18.68■□□□□ 0.58
CTSB-213ENST00000527215 CCDC69A6NI79 296 aa18.68■□□□□ 0.58
CTSB-213ENST00000527215 HSD17B4P51659 736 aa18.68■□□□□ 0.58
CTSB-213ENST00000527215 CXCL17Q6UXB2 119 aa18.68■□□□□ 0.58
CTSB-213ENST00000527215 CTCFLQ8NI51 663 aaPredicted RBP18.68■□□□□ 0.58
CTSB-213ENST00000527215 NSUN6Q8TEA1 469 aaKnown RBP18.68■□□□□ 0.58
CTSB-213ENST00000527215 SCFD2Q8WU76 684 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms