RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 PPP1R11O60927 126 aaPredicted RBP16.67■□□□□ 0.26
NXF1-204ENST00000527064 PLEKHA8P1O95397 391 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 CPA1P15085 419 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 PPP2R5BQ15173 497 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 RTN1Q16799 776 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 SLC35G1Q2M3R5 365 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 TMTC3Q6ZXV5 915 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 RUFY3Q7L099 469 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 ARRDC4Q8NCT1 418 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 MORC4Q8TE76 937 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 PAWRQ96IZ0 340 aaKnown RBP16.67■□□□□ 0.26
NXF1-204ENST00000527064 TM6SF1Q9BZW5 370 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 C11orf49Q9H6J7 331 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 MAP3K20Q9NYL2 800 aaKnown RBP16.67■□□□□ 0.26
NXF1-204ENST00000527064 NAP1L2Q9ULW6 460 aaPredicted RBP16.67■□□□□ 0.26
NXF1-204ENST00000527064 CYP46A1Q9Y6A2 500 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 ASTN1O14525 1302 aa16.67■□□□□ 0.26
NXF1-204ENST00000527064 LCTP09848 1927 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 CCDC196A0A1B0GTZ2 297 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 LRRC37A2A6NM11 1700 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 GOLGA8AA7E2F4 631 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 GOLGA8BA8MQT2 603 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 KBTBD13C9JR72 458 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 DNM1LO00429 736 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 ANAPC15P60006 121 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 RAB11FIP4Q86YS3 637 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 SRBD1Q8N5C6 995 aaKnown RBP16.66■□□□□ 0.26
NXF1-204ENST00000527064 DIS3LQ8TF46 1054 aaKnown RBP16.66■□□□□ 0.26
NXF1-204ENST00000527064 BRF1Q92994 677 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 ZSWIM6Q9HCJ5 1215 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 VTA1Q9NP79 307 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 XPNPEP3Q9NQH7 507 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 BRPF3Q9ULD4 1205 aa16.66■□□□□ 0.26
NXF1-204ENST00000527064 TNRC18O15417 2968 aaPredicted RBP16.65■□□□□ 0.26
NXF1-204ENST00000527064 SMCHD1A6NHR9 2005 aa16.65■□□□□ 0.26
NXF1-204ENST00000527064 CFBP00751 764 aa16.65■□□□□ 0.26
NXF1-204ENST00000527064 METAP2P50579 478 aaKnown RBP eCLIP16.65■□□□□ 0.26
NXF1-204ENST00000527064 HSD17B4P51659 736 aa16.65■□□□□ 0.26
NXF1-204ENST00000527064 GHRHRQ02643 423 aa16.65■□□□□ 0.26
NXF1-204ENST00000527064 PDE4DQ08499 809 aa16.65■□□□□ 0.26
NXF1-204ENST00000527064 ANO1Q5XXA6 986 aa16.65■□□□□ 0.26
NXF1-204ENST00000527064 NSUN6Q8TEA1 469 aaKnown RBP16.65■□□□□ 0.26
NXF1-204ENST00000527064 PIBF1Q8WXW3 757 aa16.65■□□□□ 0.26
NXF1-204ENST00000527064 PURBQ96QR8 312 aaKnown RBP16.65■□□□□ 0.26
NXF1-204ENST00000527064 AGXT2Q9BYV1 514 aa16.65■□□□□ 0.26
NXF1-204ENST00000527064 NID2Q14112 1375 aa16.64■□□□□ 0.26
NXF1-204ENST00000527064 DUSP11O75319 330 aaKnown RBP16.64■□□□□ 0.25
NXF1-204ENST00000527064 MNX1P50219 401 aaPredicted RBP16.64■□□□□ 0.25
NXF1-204ENST00000527064 APOBRQ0VD83 1088 aa16.64■□□□□ 0.25
NXF1-204ENST00000527064 CCDC144BQ3MJ40 725 aa16.64■□□□□ 0.25
NXF1-204ENST00000527064 RNF180Q86T96 592 aa16.64■□□□□ 0.25
NXF1-204ENST00000527064 FBXO16Q8IX29 292 aaPredicted RBP16.64■□□□□ 0.25
NXF1-204ENST00000527064 SYTL5Q8TDW5 730 aaPredicted RBP16.64■□□□□ 0.25
NXF1-204ENST00000527064 KATNBL1Q9H079 304 aa16.64■□□□□ 0.25
NXF1-204ENST00000527064 SPC25Q9HBM1 224 aa16.64■□□□□ 0.25
NXF1-204ENST00000527064 GCOM1H8Y6P7 765 aaPredicted RBP16.63■□□□□ 0.25
NXF1-204ENST00000527064 OPLAHO14841 1288 aa16.63■□□□□ 0.25
NXF1-204ENST00000527064 POLR2MP0CAP2 368 aa16.63■□□□□ 0.25
NXF1-204ENST00000527064 EDNRBP24530 442 aa16.63■□□□□ 0.25
NXF1-204ENST00000527064 CMTR1Q8N1G2 835 aaKnown RBP16.63■□□□□ 0.25
NXF1-204ENST00000527064 IWS1Q96ST2 819 aa16.63■□□□□ 0.25
NXF1-204ENST00000527064 RMDN3Q96TC7 470 aa16.63■□□□□ 0.25
NXF1-204ENST00000527064 CNTNAP5Q8WYK1 1306 aa16.63■□□□□ 0.25
NXF1-204ENST00000527064 MCM3APO60318 1980 aa16.62■□□□□ 0.25
NXF1-204ENST00000527064 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
NXF1-204ENST00000527064 COL6A1P12109 1028 aa16.62■□□□□ 0.25
NXF1-204ENST00000527064 TNFAIP2Q03169 654 aa16.62■□□□□ 0.25
NXF1-204ENST00000527064 LRRC41Q15345 812 aa16.62■□□□□ 0.25
NXF1-204ENST00000527064 GJC2Q5T442 439 aaPredicted RBP16.62■□□□□ 0.25
NXF1-204ENST00000527064 ARHGEF16Q5VV41 709 aa16.62■□□□□ 0.25
NXF1-204ENST00000527064 IQSEC1Q6DN90 963 aa16.62■□□□□ 0.25
NXF1-204ENST00000527064 NOL8Q76FK4 1167 aaKnown RBP16.62■□□□□ 0.25
NXF1-204ENST00000527064 EEPD1Q7L9B9 569 aa16.62■□□□□ 0.25
NXF1-204ENST00000527064 CCDC82Q8N4S0 544 aa16.62■□□□□ 0.25
NXF1-204ENST00000527064 DPF3Q92784 378 aa16.62■□□□□ 0.25
NXF1-204ENST00000527064 CUL5Q93034 780 aa16.62■□□□□ 0.25
NXF1-204ENST00000527064 UPF3BQ9BZI7 483 aaKnown RBP16.62■□□□□ 0.25
NXF1-204ENST00000527064 SYNRGQ9UMZ2 1314 aa16.62■□□□□ 0.25
NXF1-204ENST00000527064 hCG_1984214I3L0E3 225 aa16.61■□□□□ 0.25
NXF1-204ENST00000527064 PGK1P00558 417 aa16.61■□□□□ 0.25
NXF1-204ENST00000527064 EVCP57679 992 aa16.61■□□□□ 0.25
NXF1-204ENST00000527064 ZNF713Q8N859 430 aaPredicted RBP16.61■□□□□ 0.25
NXF1-204ENST00000527064 TBC1D5Q92609 795 aa16.61■□□□□ 0.25
NXF1-204ENST00000527064 LENG1Q96BZ8 264 aaPredicted RBP16.61■□□□□ 0.25
NXF1-204ENST00000527064 TAAR1Q96RJ0 339 aa16.61■□□□□ 0.25
NXF1-204ENST00000527064 PXMP2Q9NR77 195 aa16.61■□□□□ 0.25
NXF1-204ENST00000527064 PDRG1Q9NUG6 133 aa16.61■□□□□ 0.25
NXF1-204ENST00000527064 COL20A1Q9P218 1284 aa16.61■□□□□ 0.25
NXF1-204ENST00000527064 RBM27Q9P2N5 1060 aaKnown RBP16.61■□□□□ 0.25
NXF1-204ENST00000527064 ADAMTS4O75173 837 aa16.6■□□□□ 0.25
NXF1-204ENST00000527064 HOXA13P31271 388 aaPredicted RBP16.6■□□□□ 0.25
NXF1-204ENST00000527064 ADCYAP1R1P41586 468 aa16.6■□□□□ 0.25
NXF1-204ENST00000527064 STXBP2Q15833 593 aa16.6■□□□□ 0.25
NXF1-204ENST00000527064 PRPF38BQ5VTL8 546 aaKnown RBP16.6■□□□□ 0.25
NXF1-204ENST00000527064 TAPT1Q6NXT6 567 aa16.6■□□□□ 0.25
NXF1-204ENST00000527064 HEATR3Q7Z4Q2 680 aa16.6■□□□□ 0.25
NXF1-204ENST00000527064 SCFD2Q8WU76 684 aa16.6■□□□□ 0.25
NXF1-204ENST00000527064 TSEN34Q9BSV6 310 aaKnown RBP16.6■□□□□ 0.25
NXF1-204ENST00000527064 SENP6Q9GZR1 1112 aaPredicted RBP16.6■□□□□ 0.25
NXF1-204ENST00000527064 UPF3AQ9H1J1 476 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms