RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 GCOM1H8Y6P7 765 aaPredicted RBP18.98■□□□□ 0.63
CAPN1-205ENST00000526954 MEIS2O14770 477 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 TNPO2O14787 897 aaKnown RBP18.98■□□□□ 0.63
CAPN1-205ENST00000526954 GNRH1P01148 92 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 POLR2MP0CAP2 368 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 HSPA1AP0DMV8 641 aaKnown RBP18.98■□□□□ 0.63
CAPN1-205ENST00000526954 HSPA1BP0DMV9 641 aaKnown RBP18.98■□□□□ 0.63
CAPN1-205ENST00000526954 CALML3P27482 149 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 ADCY7P51828 1080 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 NLRP5P59047 1200 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 TRIM29Q14134 588 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 ARHGEF6Q15052 776 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 NPY5RQ15761 445 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 KRT40Q6A162 431 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 NSMFQ6X4W1 530 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 RNF207Q6ZRF8 634 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 ANKRD35Q8N283 1001 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 DAGLBQ8NCG7 672 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 FBXO18Q8NFZ0 1043 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 C8orf76Q96K31 380 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 GJB4Q9NTQ9 266 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 GJD2Q9UKL4 321 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 PLXNA1Q9UIW2 1896 aa18.98■□□□□ 0.63
CAPN1-205ENST00000526954 FOXN1O15353 648 aa18.97■□□□□ 0.63
CAPN1-205ENST00000526954 CFBP00751 764 aa18.97■□□□□ 0.63
CAPN1-205ENST00000526954 HSPA8P11142 646 aaKnown RBP18.97■□□□□ 0.63
CAPN1-205ENST00000526954 PDCP20941 246 aa18.97■□□□□ 0.63
CAPN1-205ENST00000526954 RPS6P62753 249 aaKnown RBP18.97■□□□□ 0.63
CAPN1-205ENST00000526954 CAP1Q01518 475 aa18.97■□□□□ 0.63
CAPN1-205ENST00000526954 BAATQ14032 418 aaPredicted RBP18.97■□□□□ 0.63
CAPN1-205ENST00000526954 CD99L2Q8TCZ2 262 aa18.97■□□□□ 0.63
CAPN1-205ENST00000526954 BICD2Q8TD16 824 aa18.97■□□□□ 0.63
CAPN1-205ENST00000526954 USP6NLQ92738 828 aa18.97■□□□□ 0.63
CAPN1-205ENST00000526954 PCDHA4Q9UN74 947 aa18.97■□□□□ 0.63
CAPN1-205ENST00000526954 KCNJ14Q9UNX9 436 aa18.97■□□□□ 0.63
CAPN1-205ENST00000526954 MMP1P03956 469 aa18.96■□□□□ 0.63
CAPN1-205ENST00000526954 ADORA2AP29274 412 aa18.96■□□□□ 0.63
CAPN1-205ENST00000526954 CTCFP49711 727 aaPredicted RBP18.96■□□□□ 0.63
CAPN1-205ENST00000526954 CLK2P49760 499 aaKnown RBP18.96■□□□□ 0.63
CAPN1-205ENST00000526954 LARP1BQ659C4 914 aaKnown RBP18.96■□□□□ 0.63
CAPN1-205ENST00000526954 SLC30A10Q6XR72 485 aa18.96■□□□□ 0.63
CAPN1-205ENST00000526954 FAM133AQ8N9E0 248 aa18.96■□□□□ 0.63
CAPN1-205ENST00000526954 SYTL5Q8TDW5 730 aaPredicted RBP18.96■□□□□ 0.63
CAPN1-205ENST00000526954 SOCS4Q8WXH5 440 aa18.96■□□□□ 0.63
CAPN1-205ENST00000526954 NUDT12Q9BQG2 462 aa18.96■□□□□ 0.63
CAPN1-205ENST00000526954 CASP8AP2Q9UKL3 1982 aa18.95■□□□□ 0.62
CAPN1-205ENST00000526954 M0R2N6 131 aa18.95■□□□□ 0.62
CAPN1-205ENST00000526954 HOXC6P09630 235 aa18.95■□□□□ 0.62
CAPN1-205ENST00000526954 HOXD10P28358 340 aa18.95■□□□□ 0.62
CAPN1-205ENST00000526954 HOXA13P31271 388 aaPredicted RBP18.95■□□□□ 0.62
CAPN1-205ENST00000526954 MAP2K5Q13163 448 aa18.95■□□□□ 0.62
CAPN1-205ENST00000526954 MCTP2Q6DN12 878 aa18.95■□□□□ 0.62
CAPN1-205ENST00000526954 USP17L6PQ6QN14 398 aa18.95■□□□□ 0.62
CAPN1-205ENST00000526954 BLIDQ8IZY5 108 aa18.95■□□□□ 0.62
CAPN1-205ENST00000526954 SPRYD3Q8NCJ5 442 aa18.95■□□□□ 0.62
CAPN1-205ENST00000526954 DIS3Q9Y2L1 958 aaKnown RBP18.95■□□□□ 0.62
CAPN1-205ENST00000526954 POTEB2H3BUK9 544 aa18.94■□□□□ 0.62
CAPN1-205ENST00000526954 ADAMTS3O15072 1205 aa18.94■□□□□ 0.62
CAPN1-205ENST00000526954 COBLO75128 1261 aa18.94■□□□□ 0.62
CAPN1-205ENST00000526954 FOSP01100 380 aaPredicted RBP18.94■□□□□ 0.62
CAPN1-205ENST00000526954 PDIA4P13667 645 aaKnown RBP18.94■□□□□ 0.62
CAPN1-205ENST00000526954 SYT1P21579 422 aa18.94■□□□□ 0.62
CAPN1-205ENST00000526954 FOSBP53539 338 aa18.94■□□□□ 0.62
CAPN1-205ENST00000526954 AP3B2Q13367 1082 aa18.94■□□□□ 0.62
CAPN1-205ENST00000526954 UBE2SQ16763 222 aa18.94■□□□□ 0.62
CAPN1-205ENST00000526954 ZNF792Q3KQV3 632 aa18.94■□□□□ 0.62
CAPN1-205ENST00000526954 REXO1Q8N1G1 1221 aaKnown RBP18.94■□□□□ 0.62
CAPN1-205ENST00000526954 DNERQ8NFT8 737 aa18.94■□□□□ 0.62
CAPN1-205ENST00000526954 COL20A1Q9P218 1284 aa18.94■□□□□ 0.62
CAPN1-205ENST00000526954 ECM2O94769 699 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-205ENST00000526954 PGK2P07205 417 aa18.93■□□□□ 0.62
CAPN1-205ENST00000526954 KRT2P35908 639 aa18.93■□□□□ 0.62
CAPN1-205ENST00000526954 GUCY1B3Q02153 619 aa18.93■□□□□ 0.62
CAPN1-205ENST00000526954 ZNF467Q7Z7K2 595 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-205ENST00000526954 DPP9Q86TI2 863 aa18.93■□□□□ 0.62
CAPN1-205ENST00000526954 BRMS1Q9HCU9 246 aa18.93■□□□□ 0.62
CAPN1-205ENST00000526954 SLC5A4Q9NY91 659 aa18.93■□□□□ 0.62
CAPN1-205ENST00000526954 DAXXQ9UER7 740 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-205ENST00000526954 SRRDQ9UH36 339 aa18.93■□□□□ 0.62
CAPN1-205ENST00000526954 PCDHA6Q9UN73 950 aa18.93■□□□□ 0.62
CAPN1-205ENST00000526954 PCDHA8Q9Y5H6 950 aa18.93■□□□□ 0.62
CAPN1-205ENST00000526954 LOC102724159A0A0B4J2E5 919 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 SOWAHBA6NEL2 793 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 H3BQV1 296 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 XRCC5P13010 732 aaKnown RBP18.92■□□□□ 0.62
CAPN1-205ENST00000526954 RGS2P41220 211 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 PRMT2P55345 433 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 CNTN2Q02246 1040 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 PWP2Q15269 919 aaKnown RBP18.92■□□□□ 0.62
CAPN1-205ENST00000526954 SAFBQ15424 915 aaKnown RBP eCLIP18.92■□□□□ 0.62
CAPN1-205ENST00000526954 IFFO2Q5TF58 517 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 DIS3L2Q8IYB7 885 aaKnown RBP18.92■□□□□ 0.62
CAPN1-205ENST00000526954 TNFRSF25Q93038 417 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 FGD4Q96M96 766 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 TAAR1Q96RJ0 339 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 BIN2Q9UBW5 565 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-205ENST00000526954 ADD3Q9UEY8 706 aaKnown RBP18.92■□□□□ 0.62
CAPN1-205ENST00000526954 GABRQQ9UN88 632 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 FRMPD4Q14CM0 1322 aa18.92■□□□□ 0.62
CAPN1-205ENST00000526954 SPDYE3A6NKU9 549 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms