RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 GPNMBQ14956 572 aa23.32■■□□□ 1.32
AMBRA1-205ENST00000526606 NBPF20Q3BBV1 942 aa23.32■■□□□ 1.32
AMBRA1-205ENST00000526606 TKFCQ3LXA3 575 aa23.32■■□□□ 1.32
AMBRA1-205ENST00000526606 GIMAP6Q6P9H5 292 aa23.32■■□□□ 1.32
AMBRA1-205ENST00000526606 CHMP4CQ96CF2 233 aa23.32■■□□□ 1.32
AMBRA1-205ENST00000526606 EPB41L4AQ9HCS5 686 aaPredicted RBP23.32■■□□□ 1.32
AMBRA1-205ENST00000526606 VTA1Q9NP79 307 aa23.32■■□□□ 1.32
AMBRA1-205ENST00000526606 SCN10AQ9Y5Y9 1956 aa23.32■■□□□ 1.32
AMBRA1-205ENST00000526606 TMCO2Q7Z6W1 182 aaPredicted RBP23.31■■□□□ 1.32
AMBRA1-205ENST00000526606 ZNF444Q8N0Y2 327 aaPredicted RBP23.31■■□□□ 1.32
AMBRA1-205ENST00000526606 PANK1Q8TE04 598 aa23.31■■□□□ 1.32
AMBRA1-205ENST00000526606 STAG1Q8WVM7 1258 aa23.31■■□□□ 1.32
AMBRA1-205ENST00000526606 POLR3EQ9NVU0 708 aa23.31■■□□□ 1.32
AMBRA1-205ENST00000526606 LMCD1Q9NZU5 365 aa23.31■■□□□ 1.32
AMBRA1-205ENST00000526606 PRR33A8MZF0 331 aa23.3■■□□□ 1.32
AMBRA1-205ENST00000526606 KIF28PB7ZC32 967 aa23.3■■□□□ 1.32
AMBRA1-205ENST00000526606 PITPNM1O00562 1244 aa23.3■■□□□ 1.32
AMBRA1-205ENST00000526606 MYL3P08590 195 aa23.3■■□□□ 1.32
AMBRA1-205ENST00000526606 STAT2P52630 851 aa23.3■■□□□ 1.32
AMBRA1-205ENST00000526606 FAM178BQ8IXR5 827 aa23.3■■□□□ 1.32
AMBRA1-205ENST00000526606 GDPD5Q8WTR4 605 aa23.3■■□□□ 1.32
AMBRA1-205ENST00000526606 OSBP2Q969R2 916 aa23.3■■□□□ 1.32
AMBRA1-205ENST00000526606 FTOQ9C0B1 505 aaKnown RBP eCLIP23.3■■□□□ 1.32
AMBRA1-205ENST00000526606 TRIP12Q14669 1992 aaPredicted RBP23.29■■□□□ 1.32
AMBRA1-205ENST00000526606 RBM47A0AV96 593 aaKnown RBP23.29■■□□□ 1.32
AMBRA1-205ENST00000526606 ZSCAN25Q6NSZ9 544 aa23.29■■□□□ 1.32
AMBRA1-205ENST00000526606 NEDD1Q8NHV4 660 aa23.29■■□□□ 1.32
AMBRA1-205ENST00000526606 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.29■■□□□ 1.32
AMBRA1-205ENST00000526606 CHURC1Q8WUH1 139 aa23.29■■□□□ 1.32
AMBRA1-205ENST00000526606 MTG1Q9BT17 334 aaPredicted RBP23.29■■□□□ 1.32
AMBRA1-205ENST00000526606 WDR11Q9BZH6 1224 aa23.29■■□□□ 1.32
AMBRA1-205ENST00000526606 TANC1Q9C0D5 1861 aa23.28■■□□□ 1.32
AMBRA1-205ENST00000526606 PLA2G6O60733 806 aa23.28■■□□□ 1.32
AMBRA1-205ENST00000526606 MCCP23508 829 aa23.28■■□□□ 1.32
AMBRA1-205ENST00000526606 FAM160B2Q86V87 743 aa23.28■■□□□ 1.32
AMBRA1-205ENST00000526606 GJD3Q8N144 294 aa23.28■■□□□ 1.32
AMBRA1-205ENST00000526606 GMCL1Q96IK5 515 aa23.28■■□□□ 1.32
AMBRA1-205ENST00000526606 UBE2ZQ9H832 354 aaPredicted RBP23.28■■□□□ 1.32
AMBRA1-205ENST00000526606 SUGCTQ9HAC7 445 aa23.28■■□□□ 1.32
AMBRA1-205ENST00000526606 C5orf42Q9H799 3197 aa23.28■■□□□ 1.32
AMBRA1-205ENST00000526606 RAB11FIP3O75154 756 aa23.27■■□□□ 1.32
AMBRA1-205ENST00000526606 MRE11P49959 708 aa23.27■■□□□ 1.32
AMBRA1-205ENST00000526606 FAM47CQ5HY64 1035 aa23.27■■□□□ 1.32
AMBRA1-205ENST00000526606 RASGRP2Q7LDG7 609 aa23.27■■□□□ 1.32
AMBRA1-205ENST00000526606 RETREG2Q8NC44 543 aa23.27■■□□□ 1.32
AMBRA1-205ENST00000526606 CTAGE1Q96RT6 745 aa23.27■■□□□ 1.32
AMBRA1-205ENST00000526606 PLIN4Q96Q06 1357 aa23.27■■□□□ 1.31
AMBRA1-205ENST00000526606 BAIAP3O94812 1187 aa23.26■■□□□ 1.31
AMBRA1-205ENST00000526606 CPT1AP50416 773 aa23.26■■□□□ 1.31
AMBRA1-205ENST00000526606 WDR5P61964 334 aaKnown RBP23.26■■□□□ 1.31
AMBRA1-205ENST00000526606 TCTN1Q2MV58 587 aa23.26■■□□□ 1.31
AMBRA1-205ENST00000526606 LEXMQ3ZCV2 418 aa23.26■■□□□ 1.31
AMBRA1-205ENST00000526606 NFRKBQ6P4R8 1299 aa23.26■■□□□ 1.31
AMBRA1-205ENST00000526606 NSMFQ6X4W1 530 aa23.26■■□□□ 1.31
AMBRA1-205ENST00000526606 KCTD1Q719H9 257 aa23.26■■□□□ 1.31
AMBRA1-205ENST00000526606 PRR12Q9ULL5 1215 aa23.26■■□□□ 1.31
AMBRA1-205ENST00000526606 USP34Q70CQ2 3546 aa23.25■■□□□ 1.31
AMBRA1-205ENST00000526606 DEFB103AP81534 67 aa23.25■■□□□ 1.31
AMBRA1-205ENST00000526606 BAATQ14032 418 aaPredicted RBP23.25■■□□□ 1.31
AMBRA1-205ENST00000526606 IL9P15248 144 aa23.24■■□□□ 1.31
AMBRA1-205ENST00000526606 SLC1A4P43007 532 aa23.24■■□□□ 1.31
AMBRA1-205ENST00000526606 ALDH5A1P51649 535 aaPredicted RBP23.24■■□□□ 1.31
AMBRA1-205ENST00000526606 TFAP4Q01664 338 aa23.24■■□□□ 1.31
AMBRA1-205ENST00000526606 RCSD1Q6JBY9 416 aa23.24■■□□□ 1.31
AMBRA1-205ENST00000526606 OR6J1Q8NGC5 347 aa23.24■■□□□ 1.31
AMBRA1-205ENST00000526606 ISY1Q9ULR0 285 aaKnown RBP23.24■■□□□ 1.31
AMBRA1-205ENST00000526606 A6NJR5 290 aa23.23■■□□□ 1.31
AMBRA1-205ENST00000526606 ERVK-21P61565 698 aa23.23■■□□□ 1.31
AMBRA1-205ENST00000526606 PTPN11Q06124 597 aaPredicted RBP23.23■■□□□ 1.31
AMBRA1-205ENST00000526606 IKQ13123 557 aaPredicted RBP23.23■■□□□ 1.31
AMBRA1-205ENST00000526606 BFSP2Q13515 415 aa23.23■■□□□ 1.31
AMBRA1-205ENST00000526606 COPS5Q92905 334 aa23.23■■□□□ 1.31
AMBRA1-205ENST00000526606 GPHNQ9NQX3 736 aaPredicted RBP23.23■■□□□ 1.31
AMBRA1-205ENST00000526606 MTUS1Q9ULD2 1270 aa23.23■■□□□ 1.31
AMBRA1-205ENST00000526606 CCPG1Q9ULG6 757 aa23.23■■□□□ 1.31
AMBRA1-205ENST00000526606 M0R2C6 588 aa23.22■■□□□ 1.31
AMBRA1-205ENST00000526606 GPAA1O43292 621 aa23.22■■□□□ 1.31
AMBRA1-205ENST00000526606 TSPY3P0CV98 308 aa23.22■■□□□ 1.31
AMBRA1-205ENST00000526606 TSPY8P0CW00 308 aa23.22■■□□□ 1.31
AMBRA1-205ENST00000526606 KCNA5P22460 613 aa23.22■■□□□ 1.31
AMBRA1-205ENST00000526606 NHLH1Q02575 133 aa23.22■■□□□ 1.31
AMBRA1-205ENST00000526606 APPBP2Q92624 585 aa23.22■■□□□ 1.31
AMBRA1-205ENST00000526606 ZNF287Q9HBT7 754 aa23.22■■□□□ 1.31
AMBRA1-205ENST00000526606 NFIBO00712 420 aa23.21■■□□□ 1.31
AMBRA1-205ENST00000526606 ICAM1P05362 532 aa23.21■■□□□ 1.31
AMBRA1-205ENST00000526606 KCNJ6P48051 423 aa23.21■■□□□ 1.31
AMBRA1-205ENST00000526606 TDO2P48775 406 aa23.21■■□□□ 1.31
AMBRA1-205ENST00000526606 IFNL3Q8IZI9 196 aa23.21■■□□□ 1.31
AMBRA1-205ENST00000526606 KBTBD3Q8NAB2 608 aa23.21■■□□□ 1.31
AMBRA1-205ENST00000526606 IL17RBQ9NRM6 502 aa23.21■■□□□ 1.31
AMBRA1-205ENST00000526606 ZBTB40Q9NUA8 1239 aa23.21■■□□□ 1.31
AMBRA1-205ENST00000526606 POTEB3A0JP26 581 aa23.2■■□□□ 1.3
AMBRA1-205ENST00000526606 LINC01553A4QN01 128 aa23.2■■□□□ 1.3
AMBRA1-205ENST00000526606 GRXCR2A6NFK2 248 aa23.2■■□□□ 1.3
AMBRA1-205ENST00000526606 PATL2C9JE40 543 aaKnown RBP23.2■■□□□ 1.3
AMBRA1-205ENST00000526606 HMMRO75330 724 aa23.2■■□□□ 1.3
AMBRA1-205ENST00000526606 GJB5O95377 273 aa23.2■■□□□ 1.3
AMBRA1-205ENST00000526606 POTEBQ6S5H4 581 aa23.2■■□□□ 1.3
AMBRA1-205ENST00000526606 DHX38Q92620 1227 aaKnown RBP23.2■■□□□ 1.3
AMBRA1-205ENST00000526606 FBXL18Q96ME1 805 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms