RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 ZBTB5O15062 677 aa19.78■□□□□ 0.76
CCS-203ENST00000526058 CYTH3O43739 400 aa19.78■□□□□ 0.76
CCS-203ENST00000526058 C6orf222P0C671 652 aaPredicted RBP19.78■□□□□ 0.76
CCS-203ENST00000526058 SMPD1P17405 629 aa19.78■□□□□ 0.76
CCS-203ENST00000526058 GJA9P57773 515 aa19.78■□□□□ 0.76
CCS-203ENST00000526058 KCNA10Q16322 511 aa19.78■□□□□ 0.76
CCS-203ENST00000526058 NOL8Q76FK4 1167 aaKnown RBP19.78■□□□□ 0.76
CCS-203ENST00000526058 RASEFQ8IZ41 740 aa19.78■□□□□ 0.76
CCS-203ENST00000526058 ZNF654Q8IZM8 581 aa19.78■□□□□ 0.76
CCS-203ENST00000526058 PIGSQ96S52 555 aa19.78■□□□□ 0.76
CCS-203ENST00000526058 MTA3Q9BTC8 594 aa19.78■□□□□ 0.76
CCS-203ENST00000526058 LRRC2Q9BYS8 371 aa19.78■□□□□ 0.76
CCS-203ENST00000526058 UPF3AQ9H1J1 476 aaKnown RBP19.78■□□□□ 0.76
CCS-203ENST00000526058 RIOX1Q9H6W3 641 aa19.78■□□□□ 0.76
CCS-203ENST00000526058 LAMA3Q16787 3333 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 SZT2Q5T011 3432 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 CTAGE5O15320 804 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 ACLYP53396 1101 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 SNX17Q15036 470 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 TRIM60Q495X7 471 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 RNF20Q5VTR2 975 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 HOMER1Q86YM7 354 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 TMEM87BQ96K49 555 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 TSEN34Q9BSV6 310 aaKnown RBP19.77■□□□□ 0.76
CCS-203ENST00000526058 AMNQ9BXJ7 453 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 VTA1Q9NP79 307 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 COL20A1Q9P218 1284 aa19.77■□□□□ 0.76
CCS-203ENST00000526058 GNEQ9Y223 722 aaKnown RBP19.77■□□□□ 0.76
CCS-203ENST00000526058 MRPL11Q9Y3B7 192 aaKnown RBP19.77■□□□□ 0.76
CCS-203ENST00000526058 LOC102724159A0A0B4J2E5 919 aa19.76■□□□□ 0.75
CCS-203ENST00000526058 MAGEA10P43363 369 aaPredicted RBP19.76■□□□□ 0.75
CCS-203ENST00000526058 BEX3Q00994 111 aa19.76■□□□□ 0.75
CCS-203ENST00000526058 PWP2Q15269 919 aaKnown RBP19.76■□□□□ 0.75
CCS-203ENST00000526058 IQSEC1Q6DN90 963 aa19.76■□□□□ 0.75
CCS-203ENST00000526058 MCF2L2Q86YR7 1114 aa19.76■□□□□ 0.75
CCS-203ENST00000526058 DNERQ8NFT8 737 aa19.76■□□□□ 0.75
CCS-203ENST00000526058 SYTL5Q8TDW5 730 aaPredicted RBP19.76■□□□□ 0.75
CCS-203ENST00000526058 TAAR1Q96RJ0 339 aa19.76■□□□□ 0.75
CCS-203ENST00000526058 GDF15Q99988 308 aa19.76■□□□□ 0.75
CCS-203ENST00000526058 SPC25Q9HBM1 224 aa19.76■□□□□ 0.75
CCS-203ENST00000526058 PPP4R2Q9NY27 417 aa19.76■□□□□ 0.75
CCS-203ENST00000526058 MOXD2PA6NHM9 499 aa19.75■□□□□ 0.75
CCS-203ENST00000526058 OPLAHO14841 1288 aa19.75■□□□□ 0.75
CCS-203ENST00000526058 DDAH1O94760 285 aa19.75■□□□□ 0.75
CCS-203ENST00000526058 EDNRBP24530 442 aa19.75■□□□□ 0.75
CCS-203ENST00000526058 CST5P28325 142 aaPredicted RBP19.75■□□□□ 0.75
CCS-203ENST00000526058 PDE4DQ08499 809 aa19.75■□□□□ 0.75
CCS-203ENST00000526058 ADCK5Q3MIX3 580 aa19.75■□□□□ 0.75
CCS-203ENST00000526058 GNASQ5JWF2 1037 aa19.75■□□□□ 0.75
CCS-203ENST00000526058 C1orf53Q5VUE5 145 aa19.75■□□□□ 0.75
CCS-203ENST00000526058 NFXL1Q6ZNB6 911 aa19.75■□□□□ 0.75
CCS-203ENST00000526058 NEK1Q96PY6 1258 aa19.75■□□□□ 0.75
CCS-203ENST00000526058 PCDHA1Q9Y5I3 950 aa19.75■□□□□ 0.75
CCS-203ENST00000526058 CCDC69A6NI79 296 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 DYNC1LI2O43237 492 aaPredicted RBP19.74■□□□□ 0.75
CCS-203ENST00000526058 CFBP00751 764 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 ASGR1P07306 291 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 RXRAP19793 462 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 LIFRP42702 1097 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 TLK2Q86UE8 772 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 RAB11FIP4Q86YS3 637 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 TMTC2Q8N394 836 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 PCSK9Q8NBP7 692 aaKnown RBP19.74■□□□□ 0.75
CCS-203ENST00000526058 CTCFLQ8NI51 663 aaPredicted RBP19.74■□□□□ 0.75
CCS-203ENST00000526058 PIBF1Q8WXW3 757 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 MAP3K14Q99558 947 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 MAF1Q9H063 256 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 STARD7Q9NQZ5 370 aa19.74■□□□□ 0.75
CCS-203ENST00000526058 PNMA6FA0A0J9YX94 578 aa19.73■□□□□ 0.75
CCS-203ENST00000526058 RBM47A0AV96 593 aaKnown RBP19.73■□□□□ 0.75
CCS-203ENST00000526058 NKX3-2P78367 333 aa19.73■□□□□ 0.75
CCS-203ENST00000526058 MDM2Q00987 491 aaPredicted RBP19.73■□□□□ 0.75
CCS-203ENST00000526058 TLE2Q04725 743 aa19.73■□□□□ 0.75
CCS-203ENST00000526058 TSGA10IPQ3SY00 556 aa19.73■□□□□ 0.75
CCS-203ENST00000526058 DUSP28Q4G0W2 176 aa19.73■□□□□ 0.75
CCS-203ENST00000526058 TCEANC2Q96MN5 208 aa19.73■□□□□ 0.75
CCS-203ENST00000526058 WDR11Q9BZH6 1224 aa19.73■□□□□ 0.75
CCS-203ENST00000526058 PLEKHA8P1O95397 391 aa19.72■□□□□ 0.75
CCS-203ENST00000526058 CENPBP07199 599 aaPredicted RBP19.72■□□□□ 0.75
CCS-203ENST00000526058 KIF5BP33176 963 aa19.72■□□□□ 0.75
CCS-203ENST00000526058 BMP8BP34820 402 aa19.72■□□□□ 0.75
CCS-203ENST00000526058 FXR1P51114 621 aaKnown RBP eCLIP19.72■□□□□ 0.75
CCS-203ENST00000526058 HSD17B4P51659 736 aa19.72■□□□□ 0.75
CCS-203ENST00000526058 EXOSC10Q01780 885 aaKnown RBP19.72■□□□□ 0.75
CCS-203ENST00000526058 ERICH6BQ5W0A0 696 aa19.72■□□□□ 0.75
CCS-203ENST00000526058 SH3RF1Q7Z6J0 888 aa19.72■□□□□ 0.75
CCS-203ENST00000526058 CMTR1Q8N1G2 835 aaKnown RBP19.72■□□□□ 0.75
CCS-203ENST00000526058 RMDN3Q96TC7 470 aa19.72■□□□□ 0.75
CCS-203ENST00000526058 MPHOSPH6Q99547 160 aaKnown RBP19.72■□□□□ 0.75
CCS-203ENST00000526058 AP5M1Q9H0R1 490 aa19.72■□□□□ 0.75
CCS-203ENST00000526058 LTBP2Q14767 1821 aa19.72■□□□□ 0.75
CCS-203ENST00000526058 KIAA1217Q5T5P2 1943 aa19.71■□□□□ 0.75
CCS-203ENST00000526058 PQBP1O60828 265 aaKnown RBP19.71■□□□□ 0.75
CCS-203ENST00000526058 HOXA13P31271 388 aaPredicted RBP19.71■□□□□ 0.75
CCS-203ENST00000526058 GHRHRQ02643 423 aa19.71■□□□□ 0.75
CCS-203ENST00000526058 FSCN1Q16658 493 aaKnown RBP19.71■□□□□ 0.75
CCS-203ENST00000526058 SRBD1Q8N5C6 995 aaKnown RBP19.71■□□□□ 0.75
CCS-203ENST00000526058 NSUN6Q8TEA1 469 aaKnown RBP19.71■□□□□ 0.75
CCS-203ENST00000526058 VTI1AQ96AJ9 217 aa19.71■□□□□ 0.75
CCS-203ENST00000526058 GLT1D1Q96MS3 346 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms