RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 CCDC69A6NI79 296 aa21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 LIFRP42702 1097 aa21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 PWP2Q15269 919 aaKnown RBP21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 ADCK5Q3MIX3 580 aa21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 CTCFLQ8NI51 663 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 TBC1D5Q92609 795 aa21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 FERMT2Q96AC1 680 aa21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 PIGSQ96S52 555 aa21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 MAP3K14Q99558 947 aa21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 MAF1Q9H063 256 aa21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 PHF24Q9UPV7 400 aa21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 TRIOBPQ9H2D6 2365 aa21.5■■□□□ 1.03
TSPAN4-215ENST00000525334 MYADML2A6NDP7 307 aa21.49■■□□□ 1.03
TSPAN4-215ENST00000525334 TNFAIP2Q03169 654 aa21.49■■□□□ 1.03
TSPAN4-215ENST00000525334 TAPT1Q6NXT6 567 aa21.49■■□□□ 1.03
TSPAN4-215ENST00000525334 MCF2L2Q86YR7 1114 aa21.49■■□□□ 1.03
TSPAN4-215ENST00000525334 KLHDC9Q8NEP7 349 aa21.49■■□□□ 1.03
TSPAN4-215ENST00000525334 DNERQ8NFT8 737 aa21.49■■□□□ 1.03
TSPAN4-215ENST00000525334 VTA1Q9NP79 307 aa21.49■■□□□ 1.03
TSPAN4-215ENST00000525334 PDGFCQ9NRA1 345 aa21.49■■□□□ 1.03
TSPAN4-215ENST00000525334 ZMYND8Q9ULU4 1186 aaPredicted RBP21.49■■□□□ 1.03
TSPAN4-215ENST00000525334 RXRAP19793 462 aa21.48■■□□□ 1.03
TSPAN4-215ENST00000525334 KIF5BP33176 963 aa21.48■■□□□ 1.03
TSPAN4-215ENST00000525334 IRX5P78411 483 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-215ENST00000525334 KRT32Q14532 448 aa21.48■■□□□ 1.03
TSPAN4-215ENST00000525334 SLC39A5Q6ZMH5 540 aa21.48■■□□□ 1.03
TSPAN4-215ENST00000525334 SYTL5Q8TDW5 730 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-215ENST00000525334 UPF3AQ9H1J1 476 aaKnown RBP21.48■■□□□ 1.03
TSPAN4-215ENST00000525334 COL20A1Q9P218 1284 aa21.48■■□□□ 1.03
TSPAN4-215ENST00000525334 PCDHA1Q9Y5I3 950 aa21.48■■□□□ 1.03
TSPAN4-215ENST00000525334 BAZ2BQ9UIF8 2168 aaKnown RBP21.48■■□□□ 1.03
TSPAN4-215ENST00000525334 OPLAHO14841 1288 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 REC8O95072 547 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 C6orf222P0C671 652 aaPredicted RBP21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 SMPD1P17405 629 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 SYN1P17600 705 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 EDNRBP24530 442 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 HSPA4P34932 840 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 GJA9P57773 515 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 RTP1P59025 263 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 EXOSC10Q01780 885 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 CCSAPQ6IQ19 270 aaPredicted RBP21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 NOL8Q76FK4 1167 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 DHX32Q7L7V1 743 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 RAB11FIP4Q86YS3 637 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 KCNB2Q92953 911 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 TCEANC2Q96MN5 208 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 TSEN34Q9BSV6 310 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 SPC25Q9HBM1 224 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 GNEQ9Y223 722 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 SLC12A7Q9Y666 1083 aa21.47■■□□□ 1.03
TSPAN4-215ENST00000525334 PNMA6FA0A0J9YX94 578 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 A0A1W2PQ45 241 aaPredicted RBP21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 A0A1W2PQY0 241 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 CALM1P0DP23 149 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 CALM2P0DP24 149 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 CALM3P0DP25 149 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 PTGS1P23219 599 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 CST5P28325 142 aaPredicted RBP21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 FXR1P51114 621 aaKnown RBP eCLIP21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 ACLYP53396 1101 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 PDE4DQ08499 809 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 IQSEC1Q6DN90 963 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 SGMS1Q86VZ5 419 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 PIBF1Q8WXW3 757 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 MPHOSPH6Q99547 160 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 GDF15Q99988 308 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 SPZ1Q9BXG8 430 aa21.46■■□□□ 1.03
TSPAN4-215ENST00000525334 CTAGE5O15320 804 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 PLEKHA8P1O95397 391 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 CFBP00751 764 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 BMP8BP34820 402 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 GHRHRQ02643 423 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 SNX17Q15036 470 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 KCNA10Q16322 511 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 TMEM63BQ5T3F8 832 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 TLK2Q86UE8 772 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 TAAR1Q96RJ0 339 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 LZTS2Q9BRK4 669 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 ATP11BQ9Y2G3 1177 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 SNX14Q9Y5W7 946 aa21.45■■□□□ 1.02
TSPAN4-215ENST00000525334 MOXD2PA6NHM9 499 aa21.44■■□□□ 1.02
TSPAN4-215ENST00000525334 SMARCA1P28370 1054 aa21.44■■□□□ 1.02
TSPAN4-215ENST00000525334 GNAQP50148 359 aa21.44■■□□□ 1.02
TSPAN4-215ENST00000525334 HSD17B4P51659 736 aa21.44■■□□□ 1.02
TSPAN4-215ENST00000525334 NKX3-2P78367 333 aa21.44■■□□□ 1.02
TSPAN4-215ENST00000525334 TRAF1Q13077 416 aa21.44■■□□□ 1.02
TSPAN4-215ENST00000525334 TRIM60Q495X7 471 aa21.44■■□□□ 1.02
TSPAN4-215ENST00000525334 MICU3Q86XE3 530 aa21.44■■□□□ 1.02
TSPAN4-215ENST00000525334 RBM47A0AV96 593 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 B4DLN1 442 aa21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 HMGB1P09429 215 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 MRPL12P52815 198 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 BEX3Q00994 111 aa21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 GNASQ5JWF2 1037 aa21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 C1orf53Q5VUE5 145 aa21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 APOA5Q6Q788 366 aa21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 CMTR1Q8N1G2 835 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 SRBD1Q8N5C6 995 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 PCSK9Q8NBP7 692 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms