RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 APOBRQ0VD83 1088 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 LHX8Q68G74 356 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 ARMCX2Q7L311 632 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 TEX2Q8IWB9 1127 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 CCDC144CPQ8IYA2 1237 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 TRPV1Q8NER1 839 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 MORC4Q8TE76 937 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 SHISA4Q96DD7 197 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 ALDH8A1Q9H2A2 487 aaPredicted RBP11.71□□□□□ -0.53
TTC39A-213ENST00000524442 PDRG1Q9NUG6 133 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.71□□□□□ -0.53
TTC39A-213ENST00000524442 ZNFX1Q9P2E3 1918 aaKnown RBP11.7□□□□□ -0.54
TTC39A-213ENST00000524442 SEC24BO95487 1268 aa11.7□□□□□ -0.54
TTC39A-213ENST00000524442 ZNF865P0CJ78 1059 aaPredicted RBP11.7□□□□□ -0.54
TTC39A-213ENST00000524442 AKR1A1P14550 325 aa11.7□□□□□ -0.54
TTC39A-213ENST00000524442 CALML3P27482 149 aa11.7□□□□□ -0.54
TTC39A-213ENST00000524442 ALDH5A1P51649 535 aaPredicted RBP11.7□□□□□ -0.54
TTC39A-213ENST00000524442 HSD17B4P51659 736 aa11.7□□□□□ -0.54
TTC39A-213ENST00000524442 ACVR2BQ13705 512 aa11.7□□□□□ -0.54
TTC39A-213ENST00000524442 ANKRD1Q15327 319 aa11.7□□□□□ -0.54
TTC39A-213ENST00000524442 PRAMEF19Q5SWL8 479 aa11.7□□□□□ -0.54
TTC39A-213ENST00000524442 SLC30A10Q6XR72 485 aa11.7□□□□□ -0.54
TTC39A-213ENST00000524442 SYTL5Q8TDW5 730 aaPredicted RBP11.7□□□□□ -0.54
TTC39A-213ENST00000524442 NSUN6Q8TEA1 469 aaKnown RBP11.7□□□□□ -0.54
TTC39A-213ENST00000524442 ZNF274Q96GC6 653 aaPredicted RBP11.7□□□□□ -0.54
TTC39A-213ENST00000524442 UPF3BQ9BZI7 483 aaKnown RBP11.7□□□□□ -0.54
TTC39A-213ENST00000524442 RBM27Q9P2N5 1060 aaKnown RBP11.7□□□□□ -0.54
TTC39A-213ENST00000524442 FAM184BQ9ULE4 1060 aa11.7□□□□□ -0.54
TTC39A-213ENST00000524442 NAP1L2Q9ULW6 460 aaPredicted RBP11.7□□□□□ -0.54
TTC39A-213ENST00000524442 GTF3C3Q9Y5Q9 886 aa11.7□□□□□ -0.54
TTC39A-213ENST00000524442 hCG_1984214I3L0E3 225 aa11.69□□□□□ -0.54
TTC39A-213ENST00000524442 OPLAHO14841 1288 aa11.69□□□□□ -0.54
TTC39A-213ENST00000524442 FARP2O94887 1054 aaPredicted RBP11.69□□□□□ -0.54
TTC39A-213ENST00000524442 CFBP00751 764 aa11.69□□□□□ -0.54
TTC39A-213ENST00000524442 RARBP10826 455 aa11.69□□□□□ -0.54
TTC39A-213ENST00000524442 FUT2Q10981 343 aa11.69□□□□□ -0.54
TTC39A-213ENST00000524442 TOB2Q14106 344 aaPredicted RBP11.69□□□□□ -0.54
TTC39A-213ENST00000524442 UBE2Q1Q7Z7E8 422 aa11.69□□□□□ -0.54
TTC39A-213ENST00000524442 RAB11FIP4Q86YS3 637 aa11.69□□□□□ -0.54
TTC39A-213ENST00000524442 ZNF713Q8N859 430 aaPredicted RBP11.69□□□□□ -0.54
TTC39A-213ENST00000524442 ARRDC4Q8NCT1 418 aa11.69□□□□□ -0.54
TTC39A-213ENST00000524442 IWS1Q96ST2 819 aa11.69□□□□□ -0.54
TTC39A-213ENST00000524442 VTA1Q9NP79 307 aa11.69□□□□□ -0.54
TTC39A-213ENST00000524442 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
TTC39A-213ENST00000524442 PLXNA1Q9UIW2 1896 aa11.69□□□□□ -0.54
TTC39A-213ENST00000524442 ASTN1O14525 1302 aa11.68□□□□□ -0.54
TTC39A-213ENST00000524442 CNTNAP5Q8WYK1 1306 aa11.68□□□□□ -0.54
TTC39A-213ENST00000524442 GCOM1H8Y6P7 765 aaPredicted RBP11.68□□□□□ -0.54
TTC39A-213ENST00000524442 POLR2MP0CAP2 368 aa11.68□□□□□ -0.54
TTC39A-213ENST00000524442 EDNRBP24530 442 aa11.68□□□□□ -0.54
TTC39A-213ENST00000524442 PDIA3P30101 505 aaKnown RBP11.68□□□□□ -0.54
TTC39A-213ENST00000524442 CDC27P30260 824 aa11.68□□□□□ -0.54
TTC39A-213ENST00000524442 CMTR1Q8N1G2 835 aaKnown RBP11.68□□□□□ -0.54
TTC39A-213ENST00000524442 CCDC82Q8N4S0 544 aa11.68□□□□□ -0.54
TTC39A-213ENST00000524442 IL27Q8NEV9 243 aa11.68□□□□□ -0.54
TTC39A-213ENST00000524442 PIBF1Q8WXW3 757 aa11.68□□□□□ -0.54
TTC39A-213ENST00000524442 TBC1D5Q92609 795 aa11.68□□□□□ -0.54
TTC39A-213ENST00000524442 RMDN3Q96TC7 470 aa11.68□□□□□ -0.54
TTC39A-213ENST00000524442 KATNBL1Q9H079 304 aa11.68□□□□□ -0.54
TTC39A-213ENST00000524442 UPF2Q9HAU5 1272 aaKnown RBP11.68□□□□□ -0.54
TTC39A-213ENST00000524442 ZHX1Q9UKY1 873 aaPredicted RBP11.68□□□□□ -0.54
TTC39A-213ENST00000524442 PIK3CDO00329 1044 aa11.67□□□□□ -0.54
TTC39A-213ENST00000524442 DNM1LO00429 736 aa11.67□□□□□ -0.54
TTC39A-213ENST00000524442 DUSP11O75319 330 aaKnown RBP11.67□□□□□ -0.54
TTC39A-213ENST00000524442 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
TTC39A-213ENST00000524442 PDE4DQ08499 809 aa11.67□□□□□ -0.54
TTC39A-213ENST00000524442 CCDC144BQ3MJ40 725 aa11.67□□□□□ -0.54
TTC39A-213ENST00000524442 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
TTC39A-213ENST00000524442 PPP1R18Q6NYC8 613 aa11.67□□□□□ -0.54
TTC39A-213ENST00000524442 NECAB2Q7Z6G3 386 aa11.67□□□□□ -0.54
TTC39A-213ENST00000524442 CUL5Q93034 780 aa11.67□□□□□ -0.54
TTC39A-213ENST00000524442 PURBQ96QR8 312 aaKnown RBP11.67□□□□□ -0.54
TTC39A-213ENST00000524442 TAAR1Q96RJ0 339 aa11.67□□□□□ -0.54
TTC39A-213ENST00000524442 V9GY48 417 aaPredicted RBP11.67□□□□□ -0.54
TTC39A-213ENST00000524442 SMCHD1A6NHR9 2005 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 RBM47A0AV96 593 aaKnown RBP11.66□□□□□ -0.54
TTC39A-213ENST00000524442 PRPF3O43395 683 aaKnown RBP11.66□□□□□ -0.54
TTC39A-213ENST00000524442 IFNAR1P17181 557 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
TTC39A-213ENST00000524442 AKAP17AQ02040 695 aaKnown RBP11.66□□□□□ -0.54
TTC39A-213ENST00000524442 STXBP2Q15833 593 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 NTRK3Q16288 839 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 ARHGEF16Q5VV41 709 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 TAPT1Q6NXT6 567 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 CPLX2Q6PUV4 134 aaKnown RBP11.66□□□□□ -0.54
TTC39A-213ENST00000524442 RNF180Q86T96 592 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 HTATIP2Q9BUP3 242 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 RNF26Q9BY78 433 aaPredicted RBP11.66□□□□□ -0.54
TTC39A-213ENST00000524442 C22orf23Q9BZE7 217 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 GLT8D2Q9H1C3 349 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 PSTPIP2Q9H939 334 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 SPC25Q9HBM1 224 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 XPNPEP3Q9NQH7 507 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 PXMP2Q9NR77 195 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 COL20A1Q9P218 1284 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 Q9Y3F1 56 aa11.66□□□□□ -0.54
TTC39A-213ENST00000524442 KBTBD13C9JR72 458 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 CPLX1O14810 134 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 EIF3JO75822 258 aaKnown RBP11.65□□□□□ -0.54
TTC39A-213ENST00000524442 NR3C2P08235 984 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms