RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 RETREG3Q86VR2 466 aa8.9□□□□□ -0.98
SPIDR-223ENST00000524033 TBC1D10CQ8IV04 446 aa8.9□□□□□ -0.98
SPIDR-223ENST00000524033 SCUBE3Q8IX30 993 aa8.9□□□□□ -0.98
SPIDR-223ENST00000524033 NKX2-3Q8TAU0 364 aa8.9□□□□□ -0.98
SPIDR-223ENST00000524033 WDR66Q8TBY9 1149 aa8.9□□□□□ -0.98
SPIDR-223ENST00000524033 XAGE2Q96GT9 111 aa8.9□□□□□ -0.98
SPIDR-223ENST00000524033 NEUROD6Q96NK8 337 aa8.9□□□□□ -0.98
SPIDR-223ENST00000524033 ELP3Q9H9T3 547 aa8.9□□□□□ -0.98
SPIDR-223ENST00000524033 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.9□□□□□ -0.98
SPIDR-223ENST00000524033 ST7Q9NRC1 585 aa8.9□□□□□ -0.98
SPIDR-223ENST00000524033 GJB4Q9NTQ9 266 aa8.9□□□□□ -0.98
SPIDR-223ENST00000524033 GNL3LQ9NVN8 582 aaKnown RBP8.9□□□□□ -0.98
SPIDR-223ENST00000524033 PAPPA2Q9BXP8 1791 aa8.9□□□□□ -0.98
SPIDR-223ENST00000524033 TMEM232C9JQI7 657 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 CFAP99D6REC4 459 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 IGF2BP3O00425 579 aaKnown RBP eCLIP8.89□□□□□ -0.99
SPIDR-223ENST00000524033 BIN1O00499 593 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 ARHGAP6O43182 974 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 GPAA1O43292 621 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 RANBP6O60518 1105 aaKnown RBP8.89□□□□□ -0.99
SPIDR-223ENST00000524033 IGSF3O75054 1194 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 POLR3DP05423 398 aaPredicted RBP8.89□□□□□ -0.99
SPIDR-223ENST00000524033 CYP2C19P33261 490 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 ZAP70P43403 619 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 SYKP43405 635 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 SOX10P56693 466 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 HAND2P61296 217 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 CCDC158Q5M9N0 1113 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 TTC39AQ5SRH9 613 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 NT5DC1Q5TFE4 455 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 FKBP1CQ5VVH2 108 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 HHIPL2Q6UWX4 724 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 KRBA2Q6ZNG9 492 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.89□□□□□ -0.99
SPIDR-223ENST00000524033 RSRC2Q7L4I2 434 aaKnown RBP8.89□□□□□ -0.99
SPIDR-223ENST00000524033 SGMS1Q86VZ5 419 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 OPTNQ96CV9 577 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 HOOK2Q96ED9 719 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 AIFM3Q96NN9 605 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 PTPN18Q99952 460 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 ALG1Q9BT22 464 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 PUS7LQ9H0K6 701 aaKnown RBP8.89□□□□□ -0.99
SPIDR-223ENST00000524033 TMOD2Q9NZR1 351 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 AKAP2Q9Y2D5 859 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 CSADQ9Y600 493 aa8.89□□□□□ -0.99
SPIDR-223ENST00000524033 SSC5DA1L4H1 1573 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 CCDC66A2RUB6 948 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 EFCAB8A8MWE9 144 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 PPFIA3O75145 1194 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 CDKL5O76039 1030 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 TPM1P09493 284 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 BMP6P22004 513 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 CDC27P30260 824 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 SARSP49591 514 aaKnown RBP8.88□□□□□ -0.99
SPIDR-223ENST00000524033 GTF2A2P52657 109 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 UBASH3AP57075 661 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 CTDSPL2Q05D32 466 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 PDE4BQ07343 736 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 VGLL4Q14135 290 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 ARHGAP29Q52LW3 1261 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 FBXO46Q6PJ61 603 aaPredicted RBP8.88□□□□□ -0.99
SPIDR-223ENST00000524033 APOA5Q6Q788 366 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 RNF19BQ6ZMZ0 732 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 SYNE3Q6ZMZ3 975 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 RALYLQ86SE5 291 aaKnown RBP8.88□□□□□ -0.99
SPIDR-223ENST00000524033 FAM83AQ86UY5 434 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 FOXP4Q8IVH2 680 aaPredicted RBP8.88□□□□□ -0.99
SPIDR-223ENST00000524033 TMEM87BQ96K49 555 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 USB1Q9BQ65 265 aaKnown RBP8.88□□□□□ -0.99
SPIDR-223ENST00000524033 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.88□□□□□ -0.99
SPIDR-223ENST00000524033 NAP1L2Q9ULW6 460 aaPredicted RBP8.88□□□□□ -0.99
SPIDR-223ENST00000524033 LAMB1P07942 1786 aa8.88□□□□□ -0.99
SPIDR-223ENST00000524033 MKI67P46013 3256 aaKnown RBP8.87□□□□□ -0.99
SPIDR-223ENST00000524033 TCRBV5S4A2TA0A5A2 114 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 GOLGA6L9A6NEM1 432 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 CPLX1O14810 134 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 LDHBP07195 334 aaKnown RBP8.87□□□□□ -0.99
SPIDR-223ENST00000524033 ARID4AP29374 1257 aaPredicted RBP8.87□□□□□ -0.99
SPIDR-223ENST00000524033 MARCKSP29966 332 aaPredicted RBP8.87□□□□□ -0.99
SPIDR-223ENST00000524033 METAP2P50579 478 aaKnown RBP eCLIP8.87□□□□□ -0.99
SPIDR-223ENST00000524033 CRHR2Q13324 411 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 PNOCQ13519 176 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 MORC3Q14149 939 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 UBE3CQ15386 1083 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 ZRSR1Q15695 479 aaKnown RBP8.87□□□□□ -0.99
SPIDR-223ENST00000524033 STK11IPQ8N1F8 1099 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 TC2NQ8N9U0 490 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.87□□□□□ -0.99
SPIDR-223ENST00000524033 SPATA20Q8TB22 786 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 IGDCC4Q8TDY8 1250 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 ZKSCAN4Q969J2 545 aaPredicted RBP8.87□□□□□ -0.99
SPIDR-223ENST00000524033 NOL10Q9BSC4 688 aaKnown RBP8.87□□□□□ -0.99
SPIDR-223ENST00000524033 LY9Q9HBG7 655 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 FBXO2Q9UK22 296 aaPredicted RBP8.87□□□□□ -0.99
SPIDR-223ENST00000524033 MAN1B1Q9UKM7 699 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 DENND2AQ9ULE3 1009 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 PPP2R2CQ9Y2T4 447 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 MRFAP1Q9Y605 127 aa8.87□□□□□ -0.99
SPIDR-223ENST00000524033 TACC3Q9Y6A5 838 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms