RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 TRAV20A0A0B4J274 112 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 PRODHO43272 600 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 FAM153BP0C7A2 387 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 PABPC1P11940 636 aaKnown RBP8.32□□□□□ -1.08
CPNE3-207ENST00000523588 CORO7P57737 925 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 CYP4F8P98187 520 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 ACBD5Q5T8D3 534 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-207ENST00000523588 E4F1Q66K89 784 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-207ENST00000523588 MPZL3Q6UWV2 235 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 PRR23BQ6ZRT6 265 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 DPH6Q7L8W6 267 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 JMYQ8N9B5 988 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 ZBTB38Q8NAP3 1195 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-207ENST00000523588 KCTD13Q8WZ19 329 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 ZSWIM4Q9H7M6 989 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 FAM53CQ9NYF3 392 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 RNF114Q9Y508 228 aa8.32□□□□□ -1.08
CPNE3-207ENST00000523588 KDM2BQ8NHM5 1336 aa8.31□□□□□ -1.08
CPNE3-207ENST00000523588 PAX4O43316 350 aa8.31□□□□□ -1.08
CPNE3-207ENST00000523588 NFE2L2Q16236 605 aa8.31□□□□□ -1.08
CPNE3-207ENST00000523588 FOXB2Q5VYV0 432 aa8.31□□□□□ -1.08
CPNE3-207ENST00000523588 IRF2BP1Q8IU81 584 aa8.31□□□□□ -1.08
CPNE3-207ENST00000523588 LILRB2Q8N423 598 aa8.31□□□□□ -1.08
CPNE3-207ENST00000523588 DPF3Q92784 378 aa8.31□□□□□ -1.08
CPNE3-207ENST00000523588 FMNL2Q96PY5 1086 aa8.31□□□□□ -1.08
CPNE3-207ENST00000523588 PDLIM7Q9NR12 457 aa8.31□□□□□ -1.08
CPNE3-207ENST00000523588 MEFVO15553 781 aaPredicted RBP8.3□□□□□ -1.08
CPNE3-207ENST00000523588 ERVFRD-1P60508 538 aa8.3□□□□□ -1.08
CPNE3-207ENST00000523588 MLANAQ16655 118 aa8.3□□□□□ -1.08
CPNE3-207ENST00000523588 IQCEQ6IPM2 695 aa8.3□□□□□ -1.08
CPNE3-207ENST00000523588 NSMFQ6X4W1 530 aa8.3□□□□□ -1.08
CPNE3-207ENST00000523588 PPIL6Q8IXY8 311 aa8.3□□□□□ -1.08
CPNE3-207ENST00000523588 MTA3Q9BTC8 594 aa8.3□□□□□ -1.08
CPNE3-207ENST00000523588 PIF1Q9H611 641 aa8.3□□□□□ -1.08
CPNE3-207ENST00000523588 TNFRSF12AQ9NP84 129 aa8.3□□□□□ -1.08
CPNE3-207ENST00000523588 USP35Q9P2H5 1018 aa8.3□□□□□ -1.08
CPNE3-207ENST00000523588 FBLN5Q9UBX5 448 aa8.3□□□□□ -1.08
CPNE3-207ENST00000523588 NPFFR2Q9Y5X5 522 aa8.3□□□□□ -1.08
CPNE3-207ENST00000523588 LRRC10BA6NIK2 292 aa8.29□□□□□ -1.08
CPNE3-207ENST00000523588 NPHS1O60500 1241 aa8.29□□□□□ -1.08
CPNE3-207ENST00000523588 SDHBP21912 280 aa8.29□□□□□ -1.08
CPNE3-207ENST00000523588 NTRK3Q16288 839 aa8.29□□□□□ -1.08
CPNE3-207ENST00000523588 LONRF2Q1L5Z9 754 aa8.29□□□□□ -1.08
CPNE3-207ENST00000523588 ADGRF1Q5T601 910 aa8.29□□□□□ -1.08
CPNE3-207ENST00000523588 DIO2Q92813 273 aa8.29□□□□□ -1.08
CPNE3-207ENST00000523588 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
CPNE3-207ENST00000523588 KCNK12Q9HB15 430 aa8.29□□□□□ -1.08
CPNE3-207ENST00000523588 GULP1Q9UBP9 304 aa8.29□□□□□ -1.08
CPNE3-207ENST00000523588 A0A1W2PQ27 194 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 A0A1W2PQ64 194 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 A0A1W2PQC6 194 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 A0A1W2PQD8 194 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-207ENST00000523588 LCP1P13796 627 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 LTBRP36941 435 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 ARL4AP40617 200 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 KCNAB2Q13303 367 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 FAM209AQ5JX71 171 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 SCUBE1Q8IWY4 988 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 RCBTB1Q8NDN9 531 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 EXOC2Q96KP1 924 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 NSUN3Q9H649 340 aaKnown RBP8.28□□□□□ -1.08
CPNE3-207ENST00000523588 ZNF552Q9H707 407 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-207ENST00000523588 RWDD3Q9Y3V2 267 aa8.28□□□□□ -1.08
CPNE3-207ENST00000523588 TACR1P25103 407 aa8.27□□□□□ -1.09
CPNE3-207ENST00000523588 PDE6BP35913 854 aa8.27□□□□□ -1.09
CPNE3-207ENST00000523588 MRFAP1L1Q96HT8 127 aa8.27□□□□□ -1.09
CPNE3-207ENST00000523588 DIRC2Q96SL1 478 aa8.27□□□□□ -1.09
CPNE3-207ENST00000523588 BLACEA4D250 179 aa8.26□□□□□ -1.09
CPNE3-207ENST00000523588 OR14I1A6ND48 311 aa8.26□□□□□ -1.09
CPNE3-207ENST00000523588 MESP2Q0VG99 397 aa8.26□□□□□ -1.09
CPNE3-207ENST00000523588 OGFOD2Q6N063 350 aa8.26□□□□□ -1.09
CPNE3-207ENST00000523588 USP53Q70EK8 1073 aa8.26□□□□□ -1.09
CPNE3-207ENST00000523588 LZTR1Q8N653 840 aa8.26□□□□□ -1.09
CPNE3-207ENST00000523588 PLEKHO2Q8TD55 490 aa8.26□□□□□ -1.09
CPNE3-207ENST00000523588 THAP3Q8WTV1 239 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-207ENST00000523588 DCP1AQ9NPI6 582 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-207ENST00000523588 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.26□□□□□ -1.09
CPNE3-207ENST00000523588 KLHL14Q9P2G3 628 aa8.26□□□□□ -1.09
CPNE3-207ENST00000523588 FBXL7Q9UJT9 491 aa8.26□□□□□ -1.09
CPNE3-207ENST00000523588 TIMM13Q9Y5L4 95 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-207ENST00000523588 TRBV23-1A0A0A0MS06 115 aa8.25□□□□□ -1.09
CPNE3-207ENST00000523588 SRGAP3O43295 1099 aa8.25□□□□□ -1.09
CPNE3-207ENST00000523588 MPOP05164 745 aa8.25□□□□□ -1.09
CPNE3-207ENST00000523588 GLI4P10075 376 aa8.25□□□□□ -1.09
CPNE3-207ENST00000523588 YBX1P67809 324 aaKnown RBP8.25□□□□□ -1.09
CPNE3-207ENST00000523588 CBX2Q14781 532 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-207ENST00000523588 C2orf27AQ580R0 203 aa8.25□□□□□ -1.09
CPNE3-207ENST00000523588 KISS1RQ969F8 398 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-207ENST00000523588 CDC6Q99741 560 aa8.25□□□□□ -1.09
CPNE3-207ENST00000523588 EPB41L4BQ9H329 900 aa8.25□□□□□ -1.09
CPNE3-207ENST00000523588 KRTAP9-6A0A140TA67 174 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 FUCA1P04066 466 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 DBHP09172 617 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 RPL11P62913 178 aaKnown RBP8.24□□□□□ -1.09
CPNE3-207ENST00000523588 ZC3H12BQ5HYM0 836 aaKnown RBP8.24□□□□□ -1.09
CPNE3-207ENST00000523588 BICRALQ6AI39 1079 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 KCNT2Q6UVM3 1135 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 RSPO2Q6UXX9 243 aaPredicted RBP8.24□□□□□ -1.09
CPNE3-207ENST00000523588 ZNF605Q86T29 641 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms