RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 CHRDL2Q6WN34 429 aa11.08□□□□□ -0.64
PABPC1-222ENST00000523555 CATIPQ7Z7H3 387 aa11.08□□□□□ -0.64
PABPC1-222ENST00000523555 FBXO11Q86XK2 927 aa11.08□□□□□ -0.64
PABPC1-222ENST00000523555 KLHDC9Q8NEP7 349 aa11.08□□□□□ -0.64
PABPC1-222ENST00000523555 MORC4Q8TE76 937 aa11.08□□□□□ -0.64
PABPC1-222ENST00000523555 NEK1Q96PY6 1258 aa11.08□□□□□ -0.64
PABPC1-222ENST00000523555 TAAR1Q96RJ0 339 aa11.08□□□□□ -0.64
PABPC1-222ENST00000523555 FAM184BQ9ULE4 1060 aa11.08□□□□□ -0.64
PABPC1-222ENST00000523555 ASB14A6NK59 587 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 KBTBD13C9JR72 458 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 ZBTB5O15062 677 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 DDAH1O94760 285 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 SMPD1P17405 629 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 HSPA4P34932 840 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 LIFRP42702 1097 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 BEX3Q00994 111 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 TSGA10IPQ3SY00 556 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 SLC39A5Q6ZMH5 540 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 NFXL1Q6ZNB6 911 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 SRBD1Q8N5C6 995 aaKnown RBP11.07□□□□□ -0.64
PABPC1-222ENST00000523555 ARRDC4Q8NCT1 418 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 SYTL5Q8TDW5 730 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-222ENST00000523555 KCNB2Q92953 911 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 TMEM87BQ96K49 555 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 BRPF3Q9ULD4 1205 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 GNEQ9Y223 722 aaKnown RBP11.07□□□□□ -0.64
PABPC1-222ENST00000523555 SNX14Q9Y5W7 946 aa11.07□□□□□ -0.64
PABPC1-222ENST00000523555 A0A1W2PQ45 241 aaPredicted RBP11.06□□□□□ -0.64
PABPC1-222ENST00000523555 A0A1W2PQY0 241 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 hCG_1642624A0A1W2PR95 340 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 CCDC69A6NI79 296 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 DUSP11O75319 330 aaKnown RBP11.06□□□□□ -0.64
PABPC1-222ENST00000523555 CFBP00751 764 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 EDNRBP24530 442 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 GJA9P57773 515 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 RTP1P59025 263 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 TNFAIP2Q03169 654 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 KCNA10Q16322 511 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 TRIM60Q495X7 471 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 RNF20Q5VTR2 975 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 MTA3Q9BTC8 594 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 AMNQ9BXJ7 453 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 UPF3AQ9H1J1 476 aaKnown RBP11.06□□□□□ -0.64
PABPC1-222ENST00000523555 PRO3102Q9H379 93 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 RBM27Q9P2N5 1060 aaKnown RBP11.06□□□□□ -0.64
PABPC1-222ENST00000523555 PHF24Q9UPV7 400 aa11.06□□□□□ -0.64
PABPC1-222ENST00000523555 ARIH2O95376 493 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 C6orf222P0C671 652 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-222ENST00000523555 HOXA13P31271 388 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-222ENST00000523555 HSD17B4P51659 736 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 ACLYP53396 1101 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 SNX17Q15036 470 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 DHX32Q7L7V1 743 aaKnown RBP11.05□□□□□ -0.64
PABPC1-222ENST00000523555 RNF180Q86T96 592 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 TLK2Q86UE8 772 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 SGMS1Q86VZ5 419 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 MICU3Q86XE3 530 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 CCDC82Q8N4S0 544 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 RGS22Q8NE09 1264 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 CTCFLQ8NI51 663 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-222ENST00000523555 COPS5Q92905 334 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 JAKMIP1Q96N16 626 aaKnown RBP11.05□□□□□ -0.64
PABPC1-222ENST00000523555 MAP3K14Q99558 947 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 VTA1Q9NP79 307 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 ADD3Q9UEY8 706 aaKnown RBP11.05□□□□□ -0.64
PABPC1-222ENST00000523555 ATP11BQ9Y2G3 1177 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 MRPL11Q9Y3B7 192 aaKnown RBP11.05□□□□□ -0.64
PABPC1-222ENST00000523555 PCDHA1Q9Y5I3 950 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 NR2E3Q9Y5X4 410 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 LAMA2P24043 3122 aaKnown RBP11.05□□□□□ -0.64
PABPC1-222ENST00000523555 TRIOBPQ9H2D6 2365 aa11.05□□□□□ -0.64
PABPC1-222ENST00000523555 PNMA6FA0A0J9YX94 578 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 RBM47A0AV96 593 aaKnown RBP11.04□□□□□ -0.64
PABPC1-222ENST00000523555 DYNC1LI2O43237 492 aaPredicted RBP11.04□□□□□ -0.64
PABPC1-222ENST00000523555 ASGR1P07306 291 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 EIF2AK2P19525 551 aaKnown RBP11.04□□□□□ -0.64
PABPC1-222ENST00000523555 CST5P28325 142 aaPredicted RBP11.04□□□□□ -0.64
PABPC1-222ENST00000523555 GHRHRQ02643 423 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 HABP4Q5JVS0 413 aaKnown RBP11.04□□□□□ -0.64
PABPC1-222ENST00000523555 APOA5Q6Q788 366 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 SH3RF1Q7Z6J0 888 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 DNERQ8NFT8 737 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 IL31RAQ8NI17 732 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 ZFP91Q96JP5 570 aaPredicted RBP11.04□□□□□ -0.64
PABPC1-222ENST00000523555 SPZ1Q9BXG8 430 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 PXMP2Q9NR77 195 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 FAM217BQ9NTX9 383 aaPredicted RBP11.04□□□□□ -0.64
PABPC1-222ENST00000523555 PNMA2Q9UL42 364 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 SLC12A7Q9Y666 1083 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 CNTNAP5Q8WYK1 1306 aa11.04□□□□□ -0.64
PABPC1-222ENST00000523555 SCN10AQ9Y5Y9 1956 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 CDC27P30260 824 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 MAGEA10P43363 369 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-222ENST00000523555 NKX3-2P78367 333 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 PDE4DQ08499 809 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 APOBRQ0VD83 1088 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 IQSEC1Q6DN90 963 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 Q6ZUG5 572 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 TMTC3Q6ZXV5 915 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms