RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 MAPK4P31152 587 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 CLK2P49760 499 aaKnown RBP29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 GNL2Q13823 731 aaKnown RBP29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 PKP1Q13835 747 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 MCTP1Q6DN14 999 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 DNAJC5GQ8N7S2 189 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 PORCNQ9H237 461 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 CHMP5Q9NZZ3 219 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 MGAMO43451 1857 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 PFASO15067 1338 aa29.4■■■□□ 2.3
NKX2-1-204ENST00000522719 USP17L6PQ6QN14 398 aa29.4■■■□□ 2.3
NKX2-1-204ENST00000522719 NSMFQ6X4W1 530 aa29.4■■■□□ 2.3
NKX2-1-204ENST00000522719 RNF207Q6ZRF8 634 aa29.4■■■□□ 2.3
NKX2-1-204ENST00000522719 OXER1Q8TDS5 423 aa29.4■■■□□ 2.3
NKX2-1-204ENST00000522719 FOSP01100 380 aaPredicted RBP29.39■■■□□ 2.3
NKX2-1-204ENST00000522719 AP3B2Q13367 1082 aa29.39■■■□□ 2.3
NKX2-1-204ENST00000522719 TBC1D5Q92609 795 aa29.39■■■□□ 2.3
NKX2-1-204ENST00000522719 R3HDMLQ9H3Y0 253 aa29.39■■■□□ 2.3
NKX2-1-204ENST00000522719 ZSCAN16Q9H4T2 348 aaPredicted RBP29.39■■■□□ 2.3
NKX2-1-204ENST00000522719 EFCC1Q9HA90 598 aa29.39■■■□□ 2.3
NKX2-1-204ENST00000522719 A1CFQ9NQ94 594 aaKnown RBP29.39■■■□□ 2.3
NKX2-1-204ENST00000522719 BIN2Q9UBW5 565 aaPredicted RBP29.39■■■□□ 2.3
NKX2-1-204ENST00000522719 PCDHA6Q9UN73 950 aa29.39■■■□□ 2.3
NKX2-1-204ENST00000522719 PCDHA8Q9Y5H6 950 aa29.39■■■□□ 2.3
NKX2-1-204ENST00000522719 STRNO43815 780 aa29.38■■■□□ 2.29
NKX2-1-204ENST00000522719 TBC1D8O95759 1140 aa29.38■■■□□ 2.29
NKX2-1-204ENST00000522719 RPS6P62753 249 aaKnown RBP29.38■■■□□ 2.29
NKX2-1-204ENST00000522719 ANKRD35Q8N283 1001 aa29.38■■■□□ 2.29
NKX2-1-204ENST00000522719 TNFRSF25Q93038 417 aa29.38■■■□□ 2.29
NKX2-1-204ENST00000522719 FCER1AP12319 257 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 NR5A1Q13285 461 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 UBE2SQ16763 222 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 WDR78Q5VTH9 848 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 KRT25Q7Z3Z0 450 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 NOSTRINQ8IVI9 506 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 ABRAQ8N0Z2 381 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 BEGAINQ9BUH8 593 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 CYP39A1Q9NYL5 469 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 ZDHHC9Q9Y397 364 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 DOCK3Q8IZD9 2030 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 ADAMTS3O15072 1205 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 F13A1P00488 732 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 HOXA13P31271 388 aaPredicted RBP29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 BAATQ14032 418 aaPredicted RBP29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 KCTD2Q14681 263 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 BRAPQ7Z569 592 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 MMP19Q99542 508 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 IVNS1ABPQ9Y6Y0 642 aa29.37■■■□□ 2.29
NKX2-1-204ENST00000522719 MYH15Q9Y2K3 1946 aa29.36■■■□□ 2.29
NKX2-1-204ENST00000522719 SPDYE3A6NKU9 549 aa29.36■■■□□ 2.29
NKX2-1-204ENST00000522719 KIF28PB7ZC32 967 aa29.36■■■□□ 2.29
NKX2-1-204ENST00000522719 JAKMIP3Q5VZ66 844 aa29.36■■■□□ 2.29
NKX2-1-204ENST00000522719 GPR142Q7Z601 462 aa29.36■■■□□ 2.29
NKX2-1-204ENST00000522719 RASGRP4Q8TDF6 673 aa29.36■■■□□ 2.29
NKX2-1-204ENST00000522719 SYTL5Q8TDW5 730 aaPredicted RBP29.36■■■□□ 2.29
NKX2-1-204ENST00000522719 MYH7BA7E2Y1 1941 aa29.35■■■□□ 2.29
NKX2-1-204ENST00000522719 LCTP09848 1927 aa29.35■■■□□ 2.29
NKX2-1-204ENST00000522719 CCDC194A0A1B0GVG4 234 aa29.35■■■□□ 2.29
NKX2-1-204ENST00000522719 RESTQ13127 1097 aa29.35■■■□□ 2.29
NKX2-1-204ENST00000522719 NOM1Q5C9Z4 860 aaKnown RBP29.35■■■□□ 2.29
NKX2-1-204ENST00000522719 SLC30A10Q6XR72 485 aa29.35■■■□□ 2.29
NKX2-1-204ENST00000522719 PLEKHH3Q7Z736 793 aa29.35■■■□□ 2.29
NKX2-1-204ENST00000522719 FERMT3Q86UX7 667 aa29.35■■■□□ 2.29
NKX2-1-204ENST00000522719 TMEM260Q9NX78 707 aa29.35■■■□□ 2.29
NKX2-1-204ENST00000522719 ZNF236Q9UL36 1845 aa29.34■■■□□ 2.29
NKX2-1-204ENST00000522719 EHMT1Q9H9B1 1298 aa29.34■■■□□ 2.29
NKX2-1-204ENST00000522719 PLXNA1Q9UIW2 1896 aa29.33■■■□□ 2.29
NKX2-1-204ENST00000522719 SP3Q02447 781 aa29.33■■■□□ 2.29
NKX2-1-204ENST00000522719 NONOQ15233 471 aaKnown RBP eCLIP29.33■■■□□ 2.29
NKX2-1-204ENST00000522719 FCHSD1Q86WN1 690 aa29.33■■■□□ 2.29
NKX2-1-204ENST00000522719 ANO3Q9BYT9 981 aa29.33■■■□□ 2.29
NKX2-1-204ENST00000522719 PTPREP23469 700 aa29.32■■■□□ 2.28
NKX2-1-204ENST00000522719 LACTBP83111 547 aaPredicted RBP29.32■■■□□ 2.28
NKX2-1-204ENST00000522719 PIK3AP1Q6ZUJ8 805 aa29.32■■■□□ 2.28
NKX2-1-204ENST00000522719 WBP1LQ9NX94 342 aa29.32■■■□□ 2.28
NKX2-1-204ENST00000522719 COL20A1Q9P218 1284 aa29.32■■■□□ 2.28
NKX2-1-204ENST00000522719 ATP6V1DQ9Y5K8 247 aa29.32■■■□□ 2.28
NKX2-1-204ENST00000522719 SLC15A5A6NIM6 579 aa29.31■■■□□ 2.28
NKX2-1-204ENST00000522719 GRB14Q14449 540 aa29.31■■■□□ 2.28
NKX2-1-204ENST00000522719 FOXD4L5Q5VV16 416 aaPredicted RBP29.31■■■□□ 2.28
NKX2-1-204ENST00000522719 FOXD4L4Q8WXT5 416 aaPredicted RBP29.31■■■□□ 2.28
NKX2-1-204ENST00000522719 DNAJC25-GNG10A0A024R161 153 aa29.3■■■□□ 2.28
NKX2-1-204ENST00000522719 POTEB2H3BUK9 544 aa29.3■■■□□ 2.28
NKX2-1-204ENST00000522719 GPR25O00155 361 aa29.3■■■□□ 2.28
NKX2-1-204ENST00000522719 KIF22Q14807 665 aa29.3■■■□□ 2.28
NKX2-1-204ENST00000522719 DNERQ8NFT8 737 aa29.3■■■□□ 2.28
NKX2-1-204ENST00000522719 FCGRTP55899 365 aa29.29■■■□□ 2.28
NKX2-1-204ENST00000522719 EARS2Q5JPH6 523 aaKnown RBP29.29■■■□□ 2.28
NKX2-1-204ENST00000522719 FAM133AQ8N9E0 248 aa29.29■■■□□ 2.28
NKX2-1-204ENST00000522719 TNPO2O14787 897 aaKnown RBP29.28■■■□□ 2.28
NKX2-1-204ENST00000522719 ADORA2AP29274 412 aa29.28■■■□□ 2.28
NKX2-1-204ENST00000522719 SREBF1P36956 1147 aa29.28■■■□□ 2.28
NKX2-1-204ENST00000522719 TRAPPC10P48553 1259 aa29.28■■■□□ 2.28
NKX2-1-204ENST00000522719 RILPL1Q5EBL4 403 aa29.28■■■□□ 2.28
NKX2-1-204ENST00000522719 NSUN6Q8TEA1 469 aaKnown RBP29.28■■■□□ 2.28
NKX2-1-204ENST00000522719 TBCKQ8TEA7 893 aa29.28■■■□□ 2.28
NKX2-1-204ENST00000522719 PGBD1Q96JS3 809 aa29.28■■■□□ 2.28
NKX2-1-204ENST00000522719 TAAR1Q96RJ0 339 aa29.28■■■□□ 2.28
NKX2-1-204ENST00000522719 RMDN3Q96TC7 470 aa29.28■■■□□ 2.28
NKX2-1-204ENST00000522719 ADD3Q9UEY8 706 aaKnown RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms