RNA–Protein interactions for RNA: ENST00000522502.1

CLU-213, Transcript of clusterin, human

TSL 2

Gene CLU, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLU-213	ENST00000522502	ADGRE1	Q14246	886 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	RASIP1	Q5U651	963 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	SYDE2	Q5VT97	1194 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	OTOP2	Q7RTS6	562 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	SLC43A3	Q8NBI5	491 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	PCSK9	Q8NBP7	692 aa	Known RBP	11.93	□□□□□ -0.5
CLU-213	ENST00000522502	NKX2-4	Q9H2Z4	354 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	ZNF576	Q9H609	170 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	HELLS	Q9NRZ9	838 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	TTC28	Q96AY4	2481 aa		11.93	□□□□□ -0.5
CLU-213	ENST00000522502	TCF20	Q9UGU0	1960 aa	Known RBP	11.92	□□□□□ -0.5
CLU-213	ENST00000522502	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.92	□□□□□ -0.5
CLU-213	ENST00000522502	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.92	□□□□□ -0.5
CLU-213	ENST00000522502	PLA2G6	O60733	806 aa		11.92	□□□□□ -0.5
CLU-213	ENST00000522502	ARIH2	O95376	493 aa		11.92	□□□□□ -0.5
CLU-213	ENST00000522502	ICAM1	P05362	532 aa		11.92	□□□□□ -0.5
CLU-213	ENST00000522502	ALDH5A1	P51649	535 aa	Predicted RBP	11.92	□□□□□ -0.5
CLU-213	ENST00000522502	ALX1	Q15699	326 aa		11.92	□□□□□ -0.5
CLU-213	ENST00000522502	CCDC85B	Q15834	202 aa	Predicted RBP	11.92	□□□□□ -0.5
CLU-213	ENST00000522502	MCMDC2	Q4G0Z9	681 aa		11.92	□□□□□ -0.5
CLU-213	ENST00000522502	SPRED2	Q7Z698	418 aa		11.92	□□□□□ -0.5
CLU-213	ENST00000522502	EXOC6	Q8TAG9	804 aa		11.92	□□□□□ -0.5
CLU-213	ENST00000522502	TIFA	Q96CG3	184 aa		11.92	□□□□□ -0.5
CLU-213	ENST00000522502	COL20A1	Q9P218	1284 aa		11.92	□□□□□ -0.5
CLU-213	ENST00000522502	SYNPO2	Q9UMS6	1093 aa		11.92	□□□□□ -0.5
CLU-213	ENST00000522502	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.92	□□□□□ -0.5
CLU-213	ENST00000522502	ASB14	A6NK59	587 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	RFXAP	O00287	272 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	ARHGEF15	O94989	841 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	MYL3	P08590	195 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	SDS	P20132	328 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	NKX3-2	P78367	333 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	USH1G	Q495M9	461 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	BTNL9	Q6UXG8	535 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	PLEKHM2	Q8IWE5	1019 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	DCAF4	Q8WV16	495 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	NOC4L	Q9BVI4	516 aa	Known RBP	11.91	□□□□□ -0.5
CLU-213	ENST00000522502	SPC25	Q9HBM1	224 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	MYH6	P13533	1939 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	PTPRS	Q13332	1948 aa		11.91	□□□□□ -0.5
CLU-213	ENST00000522502	CCDC171	Q6TFL3	1326 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	MYH7B	A7E2Y1	1941 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	SORBS3	O60504	671 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	TOP1	P11387	765 aa	Known RBP	11.9	□□□□□ -0.5
CLU-213	ENST00000522502	CHMP4BP1	P59074	171 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	RPS6	P62753	249 aa	Known RBP	11.9	□□□□□ -0.5
CLU-213	ENST00000522502	ZNF543	Q08ER8	600 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	PPIG	Q13427	754 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
CLU-213	ENST00000522502	HDAC1	Q13547	482 aa	Predicted RBP	11.9	□□□□□ -0.5
CLU-213	ENST00000522502	TTLL4	Q14679	1199 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.9	□□□□□ -0.5
CLU-213	ENST00000522502	TKFC	Q3LXA3	575 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	CWC27	Q6UX04	472 aa	Known RBP	11.9	□□□□□ -0.5
CLU-213	ENST00000522502	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.9	□□□□□ -0.5
CLU-213	ENST00000522502	DEFB128	Q7Z7B8	93 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	MORC4	Q8TE76	937 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	ZFP91	Q96JP5	570 aa	Predicted RBP	11.9	□□□□□ -0.5
CLU-213	ENST00000522502	WDR11	Q9BZH6	1224 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	AP5M1	Q9H0R1	490 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	HIPK3	Q9H422	1215 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	CERS4	Q9HA82	394 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	IL23A	Q9NPF7	189 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	SCN10A	Q9Y5Y9	1956 aa		11.9	□□□□□ -0.5
CLU-213	ENST00000522502	LAMA4	Q16363	1823 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502		B4E1Z4	1266 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	TCTN1	Q2MV58	587 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	DUSP28	Q4G0W2	176 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	AKNAD1	Q5T1N1	836 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	KRT40	Q6A162	431 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	IQSEC1	Q6DN90	963 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	RNF207	Q6ZRF8	634 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	TMEM199	Q8N511	208 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	TAAR1	Q96RJ0	339 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.89	□□□□□ -0.51
CLU-213	ENST00000522502	TCP11L1	Q9NUJ3	509 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	TAF6L	Q9Y6J9	622 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	TRANK1	O15050	2925 aa		11.89	□□□□□ -0.51
CLU-213	ENST00000522502	EPOP	A6NHQ4	379 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	KDM4A	O75164	1064 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	FGB	P02675	491 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	SNHG28	P0DPA3	235 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	FDX1	P10109	184 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	PURA	Q00577	322 aa	Known RBP	11.88	□□□□□ -0.51
CLU-213	ENST00000522502	SLC35G1	Q2M3R5	365 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	NBPF20	Q3BBV1	942 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	MFSD6	Q6ZSS7	791 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	STAG2	Q8N3U4	1231 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	OR6J1	Q8NGC5	347 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	HERVK_113	Q902F9	699 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	SENP2	Q9HC62	589 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	VAT1L	Q9HCJ6	419 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	VTA1	Q9NP79	307 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	RAPGEFL1	Q9UHV5	662 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.88	□□□□□ -0.51
CLU-213	ENST00000522502	KIAA1217	Q5T5P2	1943 aa		11.88	□□□□□ -0.51
CLU-213	ENST00000522502	MROH7	Q68CQ1	1323 aa		11.87	□□□□□ -0.51
CLU-213	ENST00000522502	RBM47	A0AV96	593 aa	Known RBP	11.87	□□□□□ -0.51
CLU-213	ENST00000522502	TLR3	O15455	904 aa	Known RBP	11.87	□□□□□ -0.51
CLU-213	ENST00000522502	IGFBP4	P22692	258 aa		11.87	□□□□□ -0.51
CLU-213	ENST00000522502	PDE4A	P27815	886 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms