RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 CHST3Q7LGC8 479 aa10.96□□□□□ -0.65
CLK4-209ENST00000521621 SRBD1Q8N5C6 995 aaKnown RBP10.96□□□□□ -0.65
CLK4-209ENST00000521621 DEFB118Q96PH6 123 aa10.96□□□□□ -0.65
CLK4-209ENST00000521621 FAM217BQ9NTX9 383 aaPredicted RBP10.96□□□□□ -0.65
CLK4-209ENST00000521621 CNTNAP5Q8WYK1 1306 aa10.96□□□□□ -0.65
CLK4-209ENST00000521621 KIAA1217Q5T5P2 1943 aa10.96□□□□□ -0.66
CLK4-209ENST00000521621 NFIBO00712 420 aa10.96□□□□□ -0.66
CLK4-209ENST00000521621 DUSP11O75319 330 aaKnown RBP10.96□□□□□ -0.66
CLK4-209ENST00000521621 CYP2C19P33261 490 aa10.96□□□□□ -0.66
CLK4-209ENST00000521621 ACVR2BQ13705 512 aa10.96□□□□□ -0.66
CLK4-209ENST00000521621 BAATQ14032 418 aaPredicted RBP10.96□□□□□ -0.66
CLK4-209ENST00000521621 COL9A3Q14050 684 aaPredicted RBP10.96□□□□□ -0.66
CLK4-209ENST00000521621 ANKRD1Q15327 319 aa10.96□□□□□ -0.66
CLK4-209ENST00000521621 C8orf34Q49A92 452 aa10.96□□□□□ -0.66
CLK4-209ENST00000521621 GJA9P57773 515 aa10.95□□□□□ -0.66
CLK4-209ENST00000521621 RPS6P62753 249 aaKnown RBP10.95□□□□□ -0.66
CLK4-209ENST00000521621 SNX17Q15036 470 aa10.95□□□□□ -0.66
CLK4-209ENST00000521621 Q6ZUG5 572 aa10.95□□□□□ -0.66
CLK4-209ENST00000521621 KLHDC9Q8NEP7 349 aa10.95□□□□□ -0.66
CLK4-209ENST00000521621 SYTL5Q8TDW5 730 aaPredicted RBP10.95□□□□□ -0.66
CLK4-209ENST00000521621 PIGSQ96S52 555 aa10.95□□□□□ -0.66
CLK4-209ENST00000521621 GPHNQ9NQX3 736 aaPredicted RBP10.95□□□□□ -0.66
CLK4-209ENST00000521621 PHF24Q9UPV7 400 aa10.95□□□□□ -0.66
CLK4-209ENST00000521621 ESYT2A0FGR8 921 aa10.95□□□□□ -0.66
CLK4-209ENST00000521621 RTN1Q16799 776 aa10.95□□□□□ -0.66
CLK4-209ENST00000521621 TAPT1Q6NXT6 567 aa10.95□□□□□ -0.66
CLK4-209ENST00000521621 NSUN6Q8TEA1 469 aaKnown RBP10.95□□□□□ -0.66
CLK4-209ENST00000521621 HTATIP2Q9BUP3 242 aa10.95□□□□□ -0.66
CLK4-209ENST00000521621 ISY1Q9ULR0 285 aaKnown RBP10.95□□□□□ -0.66
CLK4-209ENST00000521621 PCDHA1Q9Y5I3 950 aa10.95□□□□□ -0.66
CLK4-209ENST00000521621 PRPF3O43395 683 aaKnown RBP10.94□□□□□ -0.66
CLK4-209ENST00000521621 ADAMTS4O75173 837 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 FARP2O94887 1054 aaPredicted RBP10.94□□□□□ -0.66
CLK4-209ENST00000521621 TFRCP02786 760 aaKnown RBP10.94□□□□□ -0.66
CLK4-209ENST00000521621 CASTP20810 708 aaKnown RBP10.94□□□□□ -0.66
CLK4-209ENST00000521621 RBM25P49756 843 aaKnown RBP10.94□□□□□ -0.66
CLK4-209ENST00000521621 CNTN2Q02246 1040 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 TOB2Q14106 344 aaPredicted RBP10.94□□□□□ -0.66
CLK4-209ENST00000521621 CCSAPQ6IQ19 270 aaPredicted RBP10.94□□□□□ -0.66
CLK4-209ENST00000521621 KCNV1Q6PIU1 500 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 SLC30A10Q6XR72 485 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 NECAB2Q7Z6G3 386 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 CCDC144CPQ8IYA2 1237 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 SEC63Q9UGP8 760 aaKnown RBP10.94□□□□□ -0.66
CLK4-209ENST00000521621 GNEQ9Y223 722 aaKnown RBP10.94□□□□□ -0.66
CLK4-209ENST00000521621 ALPK3Q96L96 1907 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 KLF18A0A0U1RQI7 1052 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 SNAP25P60880 206 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 EMID1Q96A84 441 aaPredicted RBP10.94□□□□□ -0.66
CLK4-209ENST00000521621 CHMP4CQ96CF2 233 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 SH3GLB2Q9NR46 395 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 MOXD2PA6NHM9 499 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 SMCHD1A6NHR9 2005 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 RARBP10826 455 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 IFNAR1P17181 557 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 NTRK3Q16288 839 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 NUP133Q8WUM0 1156 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 RNF26Q9BY78 433 aaPredicted RBP10.94□□□□□ -0.66
CLK4-209ENST00000521621 C11orf49Q9H6J7 331 aa10.94□□□□□ -0.66
CLK4-209ENST00000521621 GOLGA8AA7E2F4 631 aa10.93□□□□□ -0.66
CLK4-209ENST00000521621 GOLGA8BA8MQT2 603 aa10.93□□□□□ -0.66
CLK4-209ENST00000521621 GCOM1H8Y6P7 765 aaPredicted RBP10.93□□□□□ -0.66
CLK4-209ENST00000521621 PLEKHA8P1O95397 391 aa10.93□□□□□ -0.66
CLK4-209ENST00000521621 POLR2MP0CAP2 368 aa10.93□□□□□ -0.66
CLK4-209ENST00000521621 PDIA3P30101 505 aaKnown RBP10.93□□□□□ -0.66
CLK4-209ENST00000521621 METAP2P50579 478 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLK4-209ENST00000521621 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
CLK4-209ENST00000521621 HOMER2Q9NSB8 354 aa10.93□□□□□ -0.66
CLK4-209ENST00000521621 MTMR7Q9Y216 660 aa10.93□□□□□ -0.66
CLK4-209ENST00000521621 STK36Q9NRP7 1315 aa10.93□□□□□ -0.66
CLK4-209ENST00000521621 PFKFB3Q16875 520 aaPredicted RBP10.93□□□□□ -0.66
CLK4-209ENST00000521621 NSMFQ6X4W1 530 aa10.93□□□□□ -0.66
CLK4-209ENST00000521621 CPVLQ9H3G5 476 aa10.93□□□□□ -0.66
CLK4-209ENST00000521621 PXMP2Q9NR77 195 aa10.93□□□□□ -0.66
CLK4-209ENST00000521621 KPNA6O60684 536 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 EIF3JO75822 258 aaKnown RBP10.92□□□□□ -0.66
CLK4-209ENST00000521621 CABYRO75952 493 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 ICAM3P32942 547 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 DUSP28Q4G0W2 176 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 RNF180Q86T96 592 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 BRF1Q92994 677 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 PDRG1Q9NUG6 133 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 BARHL2Q9NY43 387 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 PTPDC1A2A3K4 754 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 DHX16O60231 1041 aaKnown RBP10.92□□□□□ -0.66
CLK4-209ENST00000521621 TGFB3P10600 412 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 USH1GQ495M9 461 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 VSIG10LQ86VR7 867 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 PCSK9Q8NBP7 692 aaKnown RBP10.92□□□□□ -0.66
CLK4-209ENST00000521621 RIC8AQ9NPQ8 531 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 COL20A1Q9P218 1284 aa10.92□□□□□ -0.66
CLK4-209ENST00000521621 CTAGE5O15320 804 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 PFKFB2O60825 505 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 FOSP01100 380 aaPredicted RBP10.91□□□□□ -0.66
CLK4-209ENST00000521621 CDC27P30260 824 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 CLK2P49760 499 aaKnown RBP10.91□□□□□ -0.66
CLK4-209ENST00000521621 LRRC41Q15345 812 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 STXBP2Q15833 593 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 CCDC144BQ3MJ40 725 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 CCDC62Q6P9F0 684 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms