RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 CFPP27918 469 aa7.54□□□□□ -1.2
PTPN12-214ENST00000520947 SF3A1Q15459 793 aaKnown RBP7.54□□□□□ -1.2
PTPN12-214ENST00000520947 OLFML2BQ68BL8 750 aa7.54□□□□□ -1.2
PTPN12-214ENST00000520947 RPTNQ6XPR3 784 aa7.54□□□□□ -1.2
PTPN12-214ENST00000520947 ZNF227Q86WZ6 799 aa7.54□□□□□ -1.2
PTPN12-214ENST00000520947 CILP2Q8IUL8 1156 aa7.54□□□□□ -1.2
PTPN12-214ENST00000520947 DRC1Q96MC2 740 aa7.54□□□□□ -1.2
PTPN12-214ENST00000520947 TOX2Q96NM4 488 aa7.54□□□□□ -1.2
PTPN12-214ENST00000520947 GULP1Q9UBP9 304 aa7.54□□□□□ -1.2
PTPN12-214ENST00000520947 PPP1R1BQ9UD71 204 aaPredicted RBP7.54□□□□□ -1.2
PTPN12-214ENST00000520947 HRKO00198 91 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 ABLIM1O14639 778 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 THBDP07204 575 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 DBHP09172 617 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 EPHB3P54753 998 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 EEPD1Q7L9B9 569 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 LRRC56Q8IYG6 542 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-214ENST00000520947 COPS5Q92905 334 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 KRTAP4-7Q9BYR0 210 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 NKX2-4Q9H2Z4 354 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 CNTD2Q9H8S5 307 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 RXFP1Q9HBX9 757 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 HCFC2Q9Y5Z7 792 aa7.53□□□□□ -1.2
PTPN12-214ENST00000520947 KLF4O43474 513 aa7.52□□□□□ -1.21
PTPN12-214ENST00000520947 ECI1P42126 302 aa7.52□□□□□ -1.21
PTPN12-214ENST00000520947 CORO7P57737 925 aa7.52□□□□□ -1.21
PTPN12-214ENST00000520947 LINC00310P59036 64 aa7.52□□□□□ -1.21
PTPN12-214ENST00000520947 TMEM62Q0P6H9 643 aa7.52□□□□□ -1.21
PTPN12-214ENST00000520947 DDR2Q16832 855 aa7.52□□□□□ -1.21
PTPN12-214ENST00000520947 PLEKHN1Q494U1 663 aaPredicted RBP7.52□□□□□ -1.21
PTPN12-214ENST00000520947 MBLAC2Q68D91 279 aa7.52□□□□□ -1.21
PTPN12-214ENST00000520947 CYP26B1Q9NR63 512 aa7.52□□□□□ -1.21
PTPN12-214ENST00000520947 FBLN5Q9UBX5 448 aa7.52□□□□□ -1.21
PTPN12-214ENST00000520947 TRBV23OR9-2A0A075B6M9 112 aa7.51□□□□□ -1.21
PTPN12-214ENST00000520947 C7orf72A4D263 438 aa7.51□□□□□ -1.21
PTPN12-214ENST00000520947 F8W031 263 aaPredicted RBP7.51□□□□□ -1.21
PTPN12-214ENST00000520947 PPP1R11O60927 126 aaPredicted RBP7.51□□□□□ -1.21
PTPN12-214ENST00000520947 STK10O94804 968 aaKnown RBP7.51□□□□□ -1.21
PTPN12-214ENST00000520947 SNRPB2P08579 225 aaKnown RBP7.51□□□□□ -1.21
PTPN12-214ENST00000520947 CDR1P51861 262 aa7.51□□□□□ -1.21
PTPN12-214ENST00000520947 NCKAP1LP55160 1127 aa7.51□□□□□ -1.21
PTPN12-214ENST00000520947 CYP4F3Q08477 520 aa7.51□□□□□ -1.21
PTPN12-214ENST00000520947 NR1I3Q14994 352 aa7.51□□□□□ -1.21
PTPN12-214ENST00000520947 SF1Q15637 639 aaKnown RBP7.51□□□□□ -1.21
PTPN12-214ENST00000520947 SLC10A6Q3KNW5 377 aa7.51□□□□□ -1.21
PTPN12-214ENST00000520947 ZC3H14Q6PJT7 736 aaKnown RBP7.51□□□□□ -1.21
PTPN12-214ENST00000520947 PAQR3Q6TCH7 311 aa7.51□□□□□ -1.21
PTPN12-214ENST00000520947 LZTR1Q8N653 840 aa7.51□□□□□ -1.21
PTPN12-214ENST00000520947 NLGN2Q8NFZ4 835 aa7.51□□□□□ -1.21
PTPN12-214ENST00000520947 USP33Q8TEY7 942 aa7.51□□□□□ -1.21
PTPN12-214ENST00000520947 DBR1Q9UK59 544 aaKnown RBP7.51□□□□□ -1.21
PTPN12-214ENST00000520947 CNOT6Q9ULM6 557 aaKnown RBP7.51□□□□□ -1.21
PTPN12-214ENST00000520947 ZC3H12DA2A288 527 aaKnown RBP7.5□□□□□ -1.21
PTPN12-214ENST00000520947 NUAK1O60285 661 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 NPHS1O60500 1241 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 CYBBP04839 570 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 ATP2B1P20020 1258 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 KCNJ6P48051 423 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 MAPKAPK2P49137 400 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 SSPNQ14714 243 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 CBX2Q14781 532 aaPredicted RBP7.5□□□□□ -1.21
PTPN12-214ENST00000520947 PRSS53Q2L4Q9 553 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 C1QL4Q86Z23 238 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 ZSCAN18Q8TBC5 510 aaPredicted RBP7.5□□□□□ -1.21
PTPN12-214ENST00000520947 FRS2Q8WU20 508 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 TRIM55Q9BYV6 548 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 IRF2BPLQ9H1B7 796 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 BTG4Q9NY30 223 aa7.5□□□□□ -1.21
PTPN12-214ENST00000520947 AGRPO00253 132 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 SRGAP3O43295 1099 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 FUCA1P04066 466 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 ZNF200P98182 395 aaPredicted RBP7.49□□□□□ -1.21
PTPN12-214ENST00000520947 RAB33AQ14088 237 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 INF2Q27J81 1249 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 CIAPIN1Q6FI81 312 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 CABP7Q86V35 215 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 LDHDQ86WU2 507 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 NPLOC4Q8TAT6 608 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 MZB1Q8WU39 189 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 KCTD3Q9Y597 815 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 IRAK3Q9Y616 596 aa7.49□□□□□ -1.21
PTPN12-214ENST00000520947 N4BP3O15049 544 aa7.48□□□□□ -1.21
PTPN12-214ENST00000520947 GLI4P10075 376 aa7.48□□□□□ -1.21
PTPN12-214ENST00000520947 PI3P19957 117 aa7.48□□□□□ -1.21
PTPN12-214ENST00000520947 HOXC12P31275 282 aa7.48□□□□□ -1.21
PTPN12-214ENST00000520947 GTF2F1P35269 517 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTPN12-214ENST00000520947 PRR5P85299 388 aa7.48□□□□□ -1.21
PTPN12-214ENST00000520947 CKAP2LQ8IYA6 745 aa7.48□□□□□ -1.21
PTPN12-214ENST00000520947 MMP19Q99542 508 aa7.48□□□□□ -1.21
PTPN12-214ENST00000520947 MTA3Q9BTC8 594 aa7.48□□□□□ -1.21
PTPN12-214ENST00000520947 MARCH2Q9P0N8 246 aa7.48□□□□□ -1.21
PTPN12-214ENST00000520947 TMEFF2Q9UIK5 374 aaPredicted RBP7.48□□□□□ -1.21
PTPN12-214ENST00000520947 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
PTPN12-214ENST00000520947 GRIA2P42262 883 aa7.47□□□□□ -1.21
PTPN12-214ENST00000520947 PPP2R2AP63151 447 aa7.47□□□□□ -1.21
PTPN12-214ENST00000520947 PANK1Q8TE04 598 aa7.47□□□□□ -1.21
PTPN12-214ENST00000520947 DPF3Q92784 378 aa7.47□□□□□ -1.21
PTPN12-214ENST00000520947 SIGLEC10Q96LC7 697 aa7.47□□□□□ -1.21
PTPN12-214ENST00000520947 EPN3Q9H201 632 aa7.47□□□□□ -1.21
PTPN12-214ENST00000520947 BCAS3Q9H6U6 928 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms