RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 PCSK9Q8NBP7 692 aaKnown RBP16.72■□□□□ 0.27
R3HCC1-206ENST00000520480 DNERQ8NFT8 737 aa16.72■□□□□ 0.27
R3HCC1-206ENST00000520480 NUP133Q8WUM0 1156 aa16.72■□□□□ 0.27
R3HCC1-206ENST00000520480 AMNQ9BXJ7 453 aa16.72■□□□□ 0.27
R3HCC1-206ENST00000520480 SENP2Q9HC62 589 aa16.72■□□□□ 0.27
R3HCC1-206ENST00000520480 PRKAG2Q9UGJ0 569 aa16.72■□□□□ 0.27
R3HCC1-206ENST00000520480 ATP11BQ9Y2G3 1177 aa16.72■□□□□ 0.27
R3HCC1-206ENST00000520480 MRPL11Q9Y3B7 192 aaKnown RBP16.72■□□□□ 0.27
R3HCC1-206ENST00000520480 ZBTB5O15062 677 aa16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 BMP8BP34820 402 aa16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 KCNA10Q16322 511 aa16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 GNASQ5JWF2 1037 aa16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 CCSAPQ6IQ19 270 aaPredicted RBP16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 TAPT1Q6NXT6 567 aa16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 EEPD1Q7L9B9 569 aa16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 FBXO16Q8IX29 292 aaPredicted RBP16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 TMTC2Q8N394 836 aa16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 MTMR8Q96EF0 704 aa16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 GDF15Q99988 308 aa16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 LY9Q9HBG7 655 aa16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 DDX49Q9Y6V7 483 aaKnown RBP16.71■□□□□ 0.27
R3HCC1-206ENST00000520480 DDAH1O94760 285 aa16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 SLC34A2O95436 690 aa16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 MAGEA10P43363 369 aaPredicted RBP16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 NKX3-2P78367 333 aa16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 PDE4DQ08499 809 aa16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 TRIM60Q495X7 471 aa16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 GLT1D1Q96MS3 346 aa16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 MAP3K14Q99558 947 aa16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 AP5M1Q9H0R1 490 aa16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 STARD7Q9NQZ5 370 aa16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 PDGFCQ9NRA1 345 aa16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 GNEQ9Y223 722 aaKnown RBP16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 BAZ2BQ9UIF8 2168 aaKnown RBP16.7■□□□□ 0.26
R3HCC1-206ENST00000520480 LAMA2P24043 3122 aaKnown RBP16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 MYADML2A6NDP7 307 aa16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 SH2B2O14492 632 aaPredicted RBP16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 SMPD1P17405 629 aa16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 EDNRBP24530 442 aa16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 KIF5BP33176 963 aa16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 NFXL1Q6ZNB6 911 aa16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 TLK2Q86UE8 772 aa16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 ZNF654Q8IZM8 581 aa16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 CTCFLQ8NI51 663 aaPredicted RBP16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 LBHD1Q9BQE6 289 aaPredicted RBP16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 RIOX1Q9H6W3 641 aa16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 Q9Y3F1 56 aa16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 ELP1O95163 1332 aa16.69■□□□□ 0.26
R3HCC1-206ENST00000520480 RBM47A0AV96 593 aaKnown RBP16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 CCDC69A6NI79 296 aa16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 ASGR1P07306 291 aa16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 LIFRP42702 1097 aa16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 FXR1P51114 621 aaKnown RBP eCLIP16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 FSCN1Q16658 493 aaKnown RBP16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 HOMER1Q86YM7 354 aa16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 SYTL5Q8TDW5 730 aaPredicted RBP16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 NSUN6Q8TEA1 469 aaKnown RBP16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 PIGSQ96S52 555 aa16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 MAP3K20Q9NYL2 800 aaKnown RBP16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 PCDHA1Q9Y5I3 950 aa16.68■□□□□ 0.26
R3HCC1-206ENST00000520480 PNMA6FA0A0J9YX94 578 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 CTAGE5O15320 804 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 DYNC1LI2O43237 492 aaPredicted RBP16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 ZEB2O60315 1214 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 PPP1R11O60927 126 aaPredicted RBP16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 CALM1P0DP23 149 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 CALM2P0DP24 149 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 CALM3P0DP25 149 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 SMARCA1P28370 1054 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 GHRHRQ02643 423 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 TLE2Q04725 743 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 KRT32Q14532 448 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 DUSP28Q4G0W2 176 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 ERICH6BQ5W0A0 696 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 TBC1D5Q92609 795 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 IWS1Q96ST2 819 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 RMDN3Q96TC7 470 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 LZTS2Q9BRK4 669 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 WDR11Q9BZH6 1224 aa16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 UBE2OQ9C0C9 1292 aaKnown RBP16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 PRDM5Q9NQX1 630 aaPredicted RBP16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 GPHNQ9NQX3 736 aaPredicted RBP16.67■□□□□ 0.26
R3HCC1-206ENST00000520480 CYTH3O43739 400 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 PQBP1O60828 265 aaKnown RBP16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 CFBP00751 764 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 GNAQP50148 359 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 IRX5P78411 483 aaPredicted RBP16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 MDM2Q00987 491 aaPredicted RBP16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 BEX3Q00994 111 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 SLC35G1Q2M3R5 365 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 TSGA10IPQ3SY00 556 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 ANKRD33Q7Z3H0 272 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 SAMD3Q8N6K7 520 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 SCFD2Q8WU76 684 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 VTI1AQ96AJ9 217 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 TOX2Q96NM4 488 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 NEK1Q96PY6 1258 aa16.66■□□□□ 0.26
R3HCC1-206ENST00000520480 MYL10Q9BUA6 226 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms