RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 JAKMIP1Q96N16 626 aaKnown RBP16.44■□□□□ 0.22
VEGFA-221ENST00000520265 SEC63Q9UGP8 760 aaKnown RBP16.44■□□□□ 0.22
VEGFA-221ENST00000520265 PCDHA1Q9Y5I3 950 aa16.44■□□□□ 0.22
VEGFA-221ENST00000520265 ASTN1O14525 1302 aa16.44■□□□□ 0.22
VEGFA-221ENST00000520265 ALPK3Q96L96 1907 aa16.43■□□□□ 0.22
VEGFA-221ENST00000520265 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-221ENST00000520265 DUSP11O75319 330 aaKnown RBP16.43■□□□□ 0.22
VEGFA-221ENST00000520265 CALM1P0DP23 149 aa16.43■□□□□ 0.22
VEGFA-221ENST00000520265 CALM2P0DP24 149 aa16.43■□□□□ 0.22
VEGFA-221ENST00000520265 CALM3P0DP25 149 aa16.43■□□□□ 0.22
VEGFA-221ENST00000520265 TRAF1Q13077 416 aa16.43■□□□□ 0.22
VEGFA-221ENST00000520265 COL9A3Q14050 684 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-221ENST00000520265 ADCK5Q3MIX3 580 aa16.43■□□□□ 0.22
VEGFA-221ENST00000520265 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
VEGFA-221ENST00000520265 RRP36Q96EU6 259 aaKnown RBP16.43■□□□□ 0.22
VEGFA-221ENST00000520265 AP5M1Q9H0R1 490 aa16.43■□□□□ 0.22
VEGFA-221ENST00000520265 VTA1Q9NP79 307 aa16.43■□□□□ 0.22
VEGFA-221ENST00000520265 PRDM5Q9NQX1 630 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-221ENST00000520265 PRKAG2Q9UGJ0 569 aa16.43■□□□□ 0.22
VEGFA-221ENST00000520265 PLEKHA8P1O95397 391 aa16.42■□□□□ 0.22
VEGFA-221ENST00000520265 GNAQP50148 359 aa16.42■□□□□ 0.22
VEGFA-221ENST00000520265 RTP1P59025 263 aa16.42■□□□□ 0.22
VEGFA-221ENST00000520265 GNASQ5JWF2 1037 aa16.42■□□□□ 0.22
VEGFA-221ENST00000520265 ARHGEF16Q5VV41 709 aa16.42■□□□□ 0.22
VEGFA-221ENST00000520265 DHX32Q7L7V1 743 aaKnown RBP16.42■□□□□ 0.22
VEGFA-221ENST00000520265 TLK2Q86UE8 772 aa16.42■□□□□ 0.22
VEGFA-221ENST00000520265 CMTR1Q8N1G2 835 aaKnown RBP16.42■□□□□ 0.22
VEGFA-221ENST00000520265 CCDC82Q8N4S0 544 aa16.42■□□□□ 0.22
VEGFA-221ENST00000520265 TBC1D5Q92609 795 aa16.42■□□□□ 0.22
VEGFA-221ENST00000520265 MTA3Q9BTC8 594 aa16.42■□□□□ 0.22
VEGFA-221ENST00000520265 PDGFCQ9NRA1 345 aa16.42■□□□□ 0.22
VEGFA-221ENST00000520265 LCTP09848 1927 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 A0A1W2PQ45 241 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-221ENST00000520265 A0A1W2PQY0 241 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 MYADML2A6NDP7 307 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 ADCY6O43306 1168 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 PPP1R11O60927 126 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-221ENST00000520265 CPA1P15085 419 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 EIF2AK2P19525 551 aaKnown RBP16.41■□□□□ 0.22
VEGFA-221ENST00000520265 LIFRP42702 1097 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 TRIM60Q495X7 471 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 BLOC1S2Q6QNY1 142 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 DNERQ8NFT8 737 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 SYTL5Q8TDW5 730 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-221ENST00000520265 RMDN3Q96TC7 470 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 STARD7Q9NQZ5 370 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 PCDH10Q9P2E7 1040 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 COLQQ9Y215 455 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-221ENST00000520265 LRRC37A2A6NM11 1700 aa16.41■□□□□ 0.22
VEGFA-221ENST00000520265 BAZ2BQ9UIF8 2168 aaKnown RBP16.4■□□□□ 0.22
VEGFA-221ENST00000520265 PNMA6FA0A0J9YX94 578 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
VEGFA-221ENST00000520265 CYTH3O43739 400 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 ADAMTS4O75173 837 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 HMGB1P09429 215 aaKnown RBP16.4■□□□□ 0.22
VEGFA-221ENST00000520265 PTGS1P23219 599 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 HOXA13P31271 388 aaPredicted RBP16.4■□□□□ 0.22
VEGFA-221ENST00000520265 ACLYP53396 1101 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 IRX5P78411 483 aaPredicted RBP16.4■□□□□ 0.22
VEGFA-221ENST00000520265 BEX3Q00994 111 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 KCNA10Q16322 511 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 SLC39A5Q6ZMH5 540 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 FCHSD1Q86WN1 690 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 NSUN6Q8TEA1 469 aaKnown RBP16.4■□□□□ 0.22
VEGFA-221ENST00000520265 TAAR1Q96RJ0 339 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 LZTS2Q9BRK4 669 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 WDR11Q9BZH6 1224 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 KATNBL1Q9H079 304 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 PHF24Q9UPV7 400 aa16.4■□□□□ 0.22
VEGFA-221ENST00000520265 KLF18A0A0U1RQI7 1052 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 hCG_1642624A0A1W2PR95 340 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 GOLGA8AA7E2F4 631 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 GOLGA8BA8MQT2 603 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 GCOM1H8Y6P7 765 aaPredicted RBP16.39■□□□□ 0.21
VEGFA-221ENST00000520265 ZBTB43O43298 467 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 PQBP1O60828 265 aaKnown RBP16.39■□□□□ 0.21
VEGFA-221ENST00000520265 POLR2MP0CAP2 368 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 SMPD1P17405 629 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 HSPA4P34932 840 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 PPP2R5BQ15173 497 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 SLC35G1Q2M3R5 365 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 SEPT14Q6ZU15 432 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 PCSK9Q8NBP7 692 aaKnown RBP16.39■□□□□ 0.21
VEGFA-221ENST00000520265 RGS22Q8NE09 1264 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 GLT1D1Q96MS3 346 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 COL20A1Q9P218 1284 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 SNX14Q9Y5W7 946 aa16.39■□□□□ 0.21
VEGFA-221ENST00000520265 MOXD2PA6NHM9 499 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 ZEB2O60315 1214 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 ASGR1P07306 291 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 MYCLP12524 364 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-221ENST00000520265 CASTP20810 708 aaKnown RBP16.38■□□□□ 0.21
VEGFA-221ENST00000520265 GJA9P57773 515 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 FSCN1Q16658 493 aaKnown RBP16.38■□□□□ 0.21
VEGFA-221ENST00000520265 RTN1Q16799 776 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 IQSEC1Q6DN90 963 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 TAPT1Q6NXT6 567 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 APOA5Q6Q788 366 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 Q6ZUG5 572 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms