RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	MYCN	P04198	464 aa	Predicted RBP	12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	HSP90AA1	P07900	732 aa	Known RBP	12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	GJB2	P29033	226 aa		12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	PSMC4	P43686	418 aa		12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	IRF5	Q13568	498 aa		12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	RNF207	Q6ZRF8	634 aa		12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	TRMT44	Q8IYL2	757 aa	Known RBP	12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	DDX11	Q96FC9	970 aa		12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	MMP19	Q99542	508 aa		12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	NUDT12	Q9BQG2	462 aa		12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	PHF20	Q9BVI0	1012 aa		12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	A1CF	Q9NQ94	594 aa	Known RBP	12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	CYP39A1	Q9NYL5	469 aa		12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	ADD3	Q9UEY8	706 aa	Known RBP	12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	PCDHA4	Q9UN74	947 aa		12.41	□□□□□ -0.42
CHTF8-206	ENST00000519534	NFIB	O00712	420 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	TNPO2	O14787	897 aa	Known RBP	12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	CLK2	P49760	499 aa	Known RBP	12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	NLRP5	P59047	1200 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	RPS6	P62753	249 aa	Known RBP	12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	AP3B2	Q13367	1082 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	SAFB	Q15424	915 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	MUM1L1	Q5H9M0	696 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	LARP1B	Q659C4	914 aa	Known RBP	12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	TYW1B	Q6NUM6	668 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	XRRA1	Q6P2D8	792 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	FAM133A	Q8N9E0	248 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	PIBF1	Q8WXW3	757 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	C8orf76	Q96K31	380 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	TRIM47	Q96LD4	638 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	IWS1	Q96ST2	819 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	MPHOSPH6	Q99547	160 aa	Known RBP	12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	BRMS1	Q9HCU9	246 aa		12.4	□□□□□ -0.42
CHTF8-206	ENST00000519534	CEP350	Q5VT06	3117 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	POTEB2	H3BUK9	544 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534		M0R2N6	131 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	PEX10	O60683	326 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	MMP1	P03956	469 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	HSPA8	P11142	646 aa	Known RBP	12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	ADORA2A	P29274	412 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	RGS2	P41220	211 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	ADCY7	P51828	1080 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	MAP2K5	Q13163	448 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	BAAT	Q14032	418 aa	Predicted RBP	12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	PKN2	Q16513	984 aa	Known RBP	12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	ZNF792	Q3KQV3	632 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	MAMDC4	Q6UXC1	1216 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	BLID	Q8IZY5	108 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	MORC4	Q8TE76	937 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	NSUN6	Q8TEA1	469 aa	Known RBP	12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	FOXP1	Q9H334	677 aa	Predicted RBP	12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	PRDM10	Q9NQV6	1147 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	VPS54	Q9P1Q0	977 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	SRRD	Q9UH36	339 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534		A0A0G2JMZ2	1700 aa		12.39	□□□□□ -0.43
CHTF8-206	ENST00000519534	ASB14	A6NK59	587 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	STAM2	O75886	525 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	CFB	P00751	764 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	IGHA2	P01877	340 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	HSPA1A	P0DMV8	641 aa	Known RBP	12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	HSPA1B	P0DMV9	641 aa	Known RBP	12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	CTGF	P29279	349 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	SLC4A3	P48751	1232 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	NPY5R	Q15761	445 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	OLFML2B	Q68BL8	750 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	KRT40	Q6A162	431 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	NSMF	Q6X4W1	530 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	DPP9	Q86TI2	863 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	REXO1	Q8N1G1	1221 aa	Known RBP	12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	PXYLP1	Q8TE99	480 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	EHMT1	Q9H9B1	1298 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	HOMER2	Q9NSB8	354 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	DAXX	Q9UER7	740 aa	Predicted RBP	12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	NRBP1	Q9UHY1	535 aa		12.38	□□□□□ -0.43
CHTF8-206	ENST00000519534	SPDYE3	A6NKU9	549 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	FOXN1	O15353	648 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	COBL	O75128	1261 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	PPFIA3	O75145	1194 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	U2AF2	P26368	475 aa	Known RBP eCLIP	12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	KRT2	P35908	639 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	USP11	P51784	963 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	WDR78	Q5VTH9	848 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	KRT25	Q7Z3Z0	450 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	TBC1D5	Q92609	795 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	SHISA4	Q96DD7	197 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	AIFM3	Q96NN9	605 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534	FRMPD4	Q14CM0	1322 aa		12.37	□□□□□ -0.43
CHTF8-206	ENST00000519534		H3BQV1	296 aa		12.36	□□□□□ -0.43
CHTF8-206	ENST00000519534	MAFG	O15525	162 aa		12.36	□□□□□ -0.43
CHTF8-206	ENST00000519534	CYP3A4	P08684	503 aa		12.36	□□□□□ -0.43
CHTF8-206	ENST00000519534	SYT1	P21579	422 aa		12.36	□□□□□ -0.43
CHTF8-206	ENST00000519534	EDNRB	P24530	442 aa		12.36	□□□□□ -0.43
CHTF8-206	ENST00000519534	FLT3LG	P49771	235 aa		12.36	□□□□□ -0.43
CHTF8-206	ENST00000519534	IFFO2	Q5TF58	517 aa		12.36	□□□□□ -0.43
CHTF8-206	ENST00000519534	USP17L6P	Q6QN14	398 aa		12.36	□□□□□ -0.43
CHTF8-206	ENST00000519534	VSIG10L	Q86VR7	867 aa		12.36	□□□□□ -0.43
CHTF8-206	ENST00000519534	CD99L2	Q8TCZ2	262 aa		12.36	□□□□□ -0.43
CHTF8-206	ENST00000519534	RMDN3	Q96TC7	470 aa		12.36	□□□□□ -0.43

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