RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 MTIF3Q9H2K0 278 aaKnown RBP12.76□□□□□ -0.37
PVT1-208ENST00000519481 OSBPL3Q9H4L5 887 aa12.76□□□□□ -0.37
PVT1-208ENST00000519481 PDGFCQ9NRA1 345 aa12.76□□□□□ -0.37
PVT1-208ENST00000519481 NFIBO00712 420 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 ASTN1O14525 1302 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 CTAGE5O15320 804 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 CALML3P27482 149 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 NUCB1Q02818 461 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 PDE4DQ08499 809 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 CWC27Q6UX04 472 aaKnown RBP12.75□□□□□ -0.37
PVT1-208ENST00000519481 DGKHQ86XP1 1220 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 TBC1D10CQ8IV04 446 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 PLEKHM2Q8IWE5 1019 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.75□□□□□ -0.37
PVT1-208ENST00000519481 WDR19Q8NEZ3 1342 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.75□□□□□ -0.378e-8■■■□□ 15.3
PVT1-208ENST00000519481 GPHNQ9NQX3 736 aaPredicted RBP12.75□□□□□ -0.37
PVT1-208ENST00000519481 POLR3EQ9NVU0 708 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 CTNNA3Q9UI47 895 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 CUL9Q8IWT3 2517 aa12.75□□□□□ -0.37
PVT1-208ENST00000519481 LAMA2P24043 3122 aaKnown RBP12.74□□□□□ -0.37
PVT1-208ENST00000519481 A0A0C4DFX4 3053 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 RAD50Q92878 1312 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 CD4P01730 458 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 SNHG28P0DPA3 235 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 FOSL2P15408 326 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 CSF2RAP15509 400 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 DNAJB2P25686 324 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 CPT1AP50416 773 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 IMMTQ16891 758 aaKnown RBP12.74□□□□□ -0.37
PVT1-208ENST00000519481 DUSP28Q4G0W2 176 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 TMEM240Q5SV17 173 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 SLC43A3Q8NBI5 491 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 MAFAQ8NHW3 353 aaPredicted RBP12.74□□□□□ -0.37
PVT1-208ENST00000519481 MYLIPQ8WY64 445 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 PURBQ96QR8 312 aaKnown RBP12.74□□□□□ -0.37
PVT1-208ENST00000519481 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 WDR11Q9BZH6 1224 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 TTYH1Q9H313 450 aaPredicted RBP12.74□□□□□ -0.37
PVT1-208ENST00000519481 HIPK3Q9H422 1215 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 KAT14Q9H8E8 782 aa12.74□□□□□ -0.37
PVT1-208ENST00000519481 NEDD4P46934 1319 aa12.73□□□□□ -0.37
PVT1-208ENST00000519481 NKRFO15226 690 aaKnown RBP eCLIP12.73□□□□□ -0.37
PVT1-208ENST00000519481 SUPT20HL2P0C7V6 817 aa12.73□□□□□ -0.37
PVT1-208ENST00000519481 CYP2C18P33260 490 aa12.73□□□□□ -0.37
PVT1-208ENST00000519481 RPS6P62753 249 aaKnown RBP12.73□□□□□ -0.37
PVT1-208ENST00000519481 PPP2R5BQ15173 497 aa12.73□□□□□ -0.37
PVT1-208ENST00000519481 SLC30A10Q6XR72 485 aa12.73□□□□□ -0.37
PVT1-208ENST00000519481 PNMA1Q8ND90 353 aa12.73□□□□□ -0.37
PVT1-208ENST00000519481 OR6J1Q8NGC5 347 aa12.73□□□□□ -0.37
PVT1-208ENST00000519481 CLEC4DQ8WXI8 215 aa12.73□□□□□ -0.37
PVT1-208ENST00000519481 TIFAQ96CG3 184 aa12.73□□□□□ -0.37
PVT1-208ENST00000519481 DSCC1Q9BVC3 393 aa12.73□□□□□ -0.37
PVT1-208ENST00000519481 IL23AQ9NPF7 189 aa12.73□□□□□ -0.37
PVT1-208ENST00000519481 DDX49Q9Y6V7 483 aaKnown RBP12.73□□□□□ -0.37
PVT1-208ENST00000519481 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
PVT1-208ENST00000519481 DHX16O60231 1041 aaKnown RBP12.72□□□□□ -0.37
PVT1-208ENST00000519481 KPNA6O60684 536 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 KDM4AO75164 1064 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 IGHDP01880 384 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 FGBP02675 491 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 MYL3P08590 195 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 GOLGA8HP0CJ92 632 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 ACRP10323 421 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 USH1GQ495M9 461 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 ASPRV1Q53RT3 343 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 ZNF365Q70YC5 407 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 RPUSD2Q8IZ73 545 aaKnown RBP12.72□□□□□ -0.37
PVT1-208ENST00000519481 RGS22Q8NE09 1264 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 EXOC6Q8TAG9 804 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 SCFD2Q8WU76 684 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 UBAC1Q9BSL1 405 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 KRT23Q9C075 422 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 MAF1Q9H063 256 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 CNNM2Q9H8M5 875 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 MSRAQ9UJ68 235 aa12.72□□□□□ -0.37
PVT1-208ENST00000519481 ABCB11O95342 1321 aa12.71□□□□□ -0.37
PVT1-208ENST00000519481 B4E1Z4 1266 aa12.71□□□□□ -0.37
PVT1-208ENST00000519481 PSMC6P62333 389 aa12.71□□□□□ -0.37
PVT1-208ENST00000519481 CDC37Q16543 378 aaPredicted RBP12.71□□□□□ -0.37
PVT1-208ENST00000519481 MCF2L2Q86YR7 1114 aa12.71□□□□□ -0.37
PVT1-208ENST00000519481 ZSCAN10Q96SZ4 725 aaPredicted RBP12.71□□□□□ -0.37
PVT1-208ENST00000519481 MTG1Q9BT17 334 aaPredicted RBP12.71□□□□□ -0.37
PVT1-208ENST00000519481 TRPV6Q9H1D0 765 aa12.71□□□□□ -0.37
PVT1-208ENST00000519481 ZNF576Q9H609 170 aa12.71□□□□□ -0.37
PVT1-208ENST00000519481 GRIN2DO15399 1336 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 B4GALT4O60513 344 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 PARP1P09874 1014 aaKnown RBP12.7□□□□□ -0.38
PVT1-208ENST00000519481 TXNP10599 105 aaKnown RBP12.7□□□□□ -0.38
PVT1-208ENST00000519481 PTGS1P23219 599 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 EDNRBP24530 442 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 CCL23P55773 120 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 PURAQ00577 322 aaKnown RBP12.7□□□□□ -0.38
PVT1-208ENST00000519481 TTLL4Q14679 1199 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 RAB30Q15771 203 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 FAM47CQ5HY64 1035 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 TMEM63BQ5T3F8 832 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 C16orf59Q7L2K0 433 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms