RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 DDX49Q9Y6V7 483 aaKnown RBP22.47■■□□□ 1.19
CTNNA1-213ENST00000519113 GTPBP6O43824 516 aaPredicted RBP22.46■■□□□ 1.19
CTNNA1-213ENST00000519113 PPARAQ07869 468 aa22.46■■□□□ 1.19
CTNNA1-213ENST00000519113 EXOC6Q8TAG9 804 aa22.46■■□□□ 1.19
CTNNA1-213ENST00000519113 ADD3Q9UEY8 706 aaKnown RBP22.46■■□□□ 1.19
CTNNA1-213ENST00000519113 CCPG1Q9ULG6 757 aa22.46■■□□□ 1.19
CTNNA1-213ENST00000519113 PRR12Q9ULL5 1215 aa22.46■■□□□ 1.19
CTNNA1-213ENST00000519113 ACTN1P12814 892 aa22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 POU3F3P20264 500 aaPredicted RBP22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 PLA2G5P39877 138 aa22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 CPT1AP50416 773 aa22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 SNAP25P60880 206 aa22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 TTLL4Q14679 1199 aa22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 TSHZ3Q63HK5 1081 aa22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 VWCEQ96DN2 955 aa22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 FAM122AQ96E09 287 aa22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 CRBNQ96SW2 442 aa22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 GPHNQ9NQX3 736 aaPredicted RBP22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 TRMT13Q9NUP7 481 aaKnown RBP22.45■■□□□ 1.18
CTNNA1-213ENST00000519113 LOC102724159A0A0B4J2E5 919 aa22.44■■□□□ 1.18
CTNNA1-213ENST00000519113 TSPY2A6NKD2 308 aa22.44■■□□□ 1.18
CTNNA1-213ENST00000519113 ERC2O15083 957 aa22.44■■□□□ 1.18
CTNNA1-213ENST00000519113 TNKSO95271 1327 aa22.44■■□□□ 1.18
CTNNA1-213ENST00000519113 TFF2Q03403 129 aa22.44■■□□□ 1.18
CTNNA1-213ENST00000519113 PWP2Q15269 919 aaKnown RBP22.44■■□□□ 1.18
CTNNA1-213ENST00000519113 TMEM63BQ5T3F8 832 aa22.44■■□□□ 1.18
CTNNA1-213ENST00000519113 NECAB3Q96P71 396 aaPredicted RBP22.44■■□□□ 1.18
CTNNA1-213ENST00000519113 WDR11Q9BZH6 1224 aa22.44■■□□□ 1.18
CTNNA1-213ENST00000519113 ICAM1P05362 532 aa22.43■■□□□ 1.18
CTNNA1-213ENST00000519113 CA3P07451 260 aa22.43■■□□□ 1.18
CTNNA1-213ENST00000519113 CYP2C9P11712 490 aa22.43■■□□□ 1.18
CTNNA1-213ENST00000519113 RFC2P35250 354 aa22.43■■□□□ 1.18
CTNNA1-213ENST00000519113 BRDTQ58F21 947 aaPredicted RBP22.43■■□□□ 1.18
CTNNA1-213ENST00000519113 C20orf194Q5TEA3 1177 aa22.43■■□□□ 1.18
CTNNA1-213ENST00000519113 DEFB128Q7Z7B8 93 aa22.43■■□□□ 1.18
CTNNA1-213ENST00000519113 MTG1Q9BT17 334 aaPredicted RBP22.43■■□□□ 1.18
CTNNA1-213ENST00000519113 MTCH2Q9Y6C9 303 aa22.43■■□□□ 1.18
CTNNA1-213ENST00000519113 MYL3P08590 195 aa22.42■■□□□ 1.18
CTNNA1-213ENST00000519113 PURAQ00577 322 aaKnown RBP22.42■■□□□ 1.18
CTNNA1-213ENST00000519113 PHOSPHO2Q8TCD6 241 aa22.42■■□□□ 1.18
CTNNA1-213ENST00000519113 PURBQ96QR8 312 aaKnown RBP22.42■■□□□ 1.18
CTNNA1-213ENST00000519113 SLC9A7Q96T83 725 aa22.42■■□□□ 1.18
CTNNA1-213ENST00000519113 SEC62Q99442 399 aaKnown RBP22.42■■□□□ 1.18
CTNNA1-213ENST00000519113 DCTPP1Q9H773 170 aa22.42■■□□□ 1.18
CTNNA1-213ENST00000519113 ALDH5A1P51649 535 aaPredicted RBP22.41■■□□□ 1.18
CTNNA1-213ENST00000519113 BAATQ14032 418 aaPredicted RBP22.41■■□□□ 1.18
CTNNA1-213ENST00000519113 RETREG2Q8NC44 543 aa22.41■■□□□ 1.18
CTNNA1-213ENST00000519113 IL17RBQ9NRM6 502 aa22.41■■□□□ 1.18
CTNNA1-213ENST00000519113 COG5Q9UP83 839 aa22.41■■□□□ 1.18
CTNNA1-213ENST00000519113 RAD50Q92878 1312 aa22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 RBM47A0AV96 593 aaKnown RBP22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 KIF28PB7ZC32 967 aa22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 RFXAPO00287 272 aa22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 KPNA6O60684 536 aa22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 KCNQ1P51787 676 aa22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 CCDC96Q2M329 555 aa22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 FAM47CQ5HY64 1035 aa22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 OR6J1Q8NGC5 347 aa22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 DCAF4Q8WV16 495 aa22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 RANBP17Q9H2T7 1088 aaKnown RBP22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 MTMR7Q9Y216 660 aa22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 GBF1Q92538 1859 aa22.4■■□□□ 1.18
CTNNA1-213ENST00000519113 TTC41PQ6P2S7 1318 aa22.39■■□□□ 1.18
CTNNA1-213ENST00000519113 PTPDC1A2A3K4 754 aa22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 PITPNM1O00562 1244 aa22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 NKRFO15226 690 aaKnown RBP eCLIP22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 NBPF20Q3BBV1 942 aa22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 ZMYM1Q5SVZ6 1142 aa22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 B4GALNT3Q6L9W6 998 aa22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 NFRKBQ6P4R8 1299 aa22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 CCDC136Q96JN2 1154 aa22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 MPHOSPH6Q99547 160 aaKnown RBP22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 FSD1Q9BTV5 496 aa22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 CERS4Q9HA82 394 aa22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 LRRC37A2A6NM11 1700 aa22.39■■□□□ 1.17
CTNNA1-213ENST00000519113 RANBP6O60518 1105 aaKnown RBP22.38■■□□□ 1.17
CTNNA1-213ENST00000519113 NMT2O60551 498 aa22.38■■□□□ 1.17
CTNNA1-213ENST00000519113 BFSP2Q13515 415 aa22.38■■□□□ 1.17
CTNNA1-213ENST00000519113 BTNL9Q6UXG8 535 aa22.38■■□□□ 1.17
CTNNA1-213ENST00000519113 FTOQ9C0B1 505 aaKnown RBP eCLIP22.38■■□□□ 1.17
CTNNA1-213ENST00000519113 PNMA2Q9UL42 364 aa22.38■■□□□ 1.17
CTNNA1-213ENST00000519113 NFIBO00712 420 aa22.37■■□□□ 1.17
CTNNA1-213ENST00000519113 IQCF3P0C7M6 154 aa22.37■■□□□ 1.17
CTNNA1-213ENST00000519113 NOVP48745 357 aa22.37■■□□□ 1.17
CTNNA1-213ENST00000519113 CTDSPL2Q05D32 466 aa22.37■■□□□ 1.17
CTNNA1-213ENST00000519113 PTPN11Q06124 597 aaPredicted RBP22.37■■□□□ 1.17
CTNNA1-213ENST00000519113 PPP2R5BQ15173 497 aa22.37■■□□□ 1.17
CTNNA1-213ENST00000519113 SYDE2Q5VT97 1194 aa22.37■■□□□ 1.17
CTNNA1-213ENST00000519113 RASGRP2Q7LDG7 609 aa22.37■■□□□ 1.17
CTNNA1-213ENST00000519113 ARNTL2Q8WYA1 636 aa22.37■■□□□ 1.17
CTNNA1-213ENST00000519113 SLC16A2P36021 539 aa22.36■■□□□ 1.17
CTNNA1-213ENST00000519113 TAP1Q03518 808 aa22.36■■□□□ 1.17
CTNNA1-213ENST00000519113 PDE4DQ08499 809 aa22.36■■□□□ 1.17
CTNNA1-213ENST00000519113 HERC6Q8IVU3 1022 aa22.36■■□□□ 1.17
CTNNA1-213ENST00000519113 SCFD2Q8WU76 684 aa22.36■■□□□ 1.17
CTNNA1-213ENST00000519113 HLA-CQ95604 372 aa22.36■■□□□ 1.17
CTNNA1-213ENST00000519113 INCENPQ9NQS7 918 aa22.36■■□□□ 1.17
CTNNA1-213ENST00000519113 EPOPA6NHQ4 379 aa22.35■■□□□ 1.17
CTNNA1-213ENST00000519113 A6NJR5 290 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms