RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 KCTD1Q719H9 257 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 FAM160B2Q86V87 743 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 IFNL3Q8IZI9 196 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 MORC4Q8TE76 937 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 CHURC1Q8WUH1 139 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 LRFN3Q9BTN0 628 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 ZNF287Q9HBT7 754 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 VTA1Q9NP79 307 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 ECHDC1Q9NTX5 307 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 PIEZO1Q92508 2521 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 TET1Q8NFU7 2136 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 SCN10AQ9Y5Y9 1956 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 TANC1Q9C0D5 1861 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 TLL1O43897 1013 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 PLA2G6O60733 806 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 APPP05067 770 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 GNAT2P19087 354 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 PURAQ00577 322 aaKnown RBP13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 TFAP4Q01664 338 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 TAP1Q03518 808 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 DUSP28Q4G0W2 176 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 NSMFQ6X4W1 530 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 SPRED2Q7Z698 418 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 PPP1R13LQ8WUF5 828 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 PRR12Q9ULL5 1215 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 PTPRSQ13332 1948 aa13.49□□□□□ -0.25
CTNNA1-205ENST00000517904 PATL2C9JE40 543 aaKnown RBP13.48□□□□□ -0.25
CTNNA1-205ENST00000517904 GTPBP6O43824 516 aaPredicted RBP13.48□□□□□ -0.25
CTNNA1-205ENST00000517904 SUPT20HL2P0C7V6 817 aa13.48□□□□□ -0.25
CTNNA1-205ENST00000517904 MS4A1P11836 297 aa13.48□□□□□ -0.25
CTNNA1-205ENST00000517904 ARNTL2Q8WYA1 636 aa13.48□□□□□ -0.25
CTNNA1-205ENST00000517904 KHSRPQ92945 711 aaKnown RBP eCLIP13.48□□□□□ -0.25
CTNNA1-205ENST00000517904 SLC9A7Q96T83 725 aa13.48□□□□□ -0.25
CTNNA1-205ENST00000517904 COG5Q9UP83 839 aa13.48□□□□□ -0.25
CTNNA1-205ENST00000517904 MUC6Q6W4X9 2439 aa13.48□□□□□ -0.25
CTNNA1-205ENST00000517904 COL4A4P53420 1690 aaPredicted RBP13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 NMT2O60551 498 aa13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 MYL3P08590 195 aa13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 PDE4BQ07343 736 aa13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 PPARAQ07869 468 aa13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 RCSD1Q6JBY9 416 aa13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 SEC62Q99442 399 aaKnown RBP13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 WDR11Q9BZH6 1224 aa13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 C11orf16Q9NQ32 467 aa13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 IL17RBQ9NRM6 502 aa13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 POLR3EQ9NVU0 708 aa13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 CCPG1Q9ULG6 757 aa13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 STX8Q9UNK0 236 aa13.47□□□□□ -0.25
CTNNA1-205ENST00000517904 LPXNO60711 386 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 ICAM1P05362 532 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 ZFYP08048 801 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 IQCF3P0C7M6 154 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 ACTN1P12814 892 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 CPT1AP50416 773 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 ALDH5A1P51649 535 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 GRB10Q13322 594 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 BAATQ14032 418 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 NBPF20Q3BBV1 942 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 HERC6Q8IVU3 1022 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 PHOSPHO2Q8TCD6 241 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 MTG1Q9BT17 334 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 INCENPQ9NQS7 918 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 ARIH1Q9Y4X5 557 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 TRIOO75962 3097 aa13.46□□□□□ -0.25
CTNNA1-205ENST00000517904 RBM47A0AV96 593 aaKnown RBP13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 PITPNM1O00562 1244 aa13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 NFIBO00712 420 aa13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 FOXP2O15409 715 aa13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 RFC2P35250 354 aa13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 FAM47CQ5HY64 1035 aa13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 TMEM31Q5JXX7 168 aa13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 OR6J1Q8NGC5 347 aa13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 HLA-CQ95604 372 aa13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 NAPBQ9H115 298 aa13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 RANBP17Q9H2T7 1088 aaKnown RBP13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 ADD3Q9UEY8 706 aaKnown RBP13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 HCN4Q9Y3Q4 1203 aa13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 TRIP12Q14669 1992 aaPredicted RBP13.45□□□□□ -0.26
CTNNA1-205ENST00000517904 LCHNA4D1U4 455 aa13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 SLC16A2P36021 539 aa13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 TTBK2Q6IQ55 1244 aa13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 NFRKBQ6P4R8 1299 aa13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 SLC30A10Q6XR72 485 aa13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 TMCO2Q7Z6W1 182 aaPredicted RBP13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 COPS5Q92905 334 aa13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 NACAP1Q9BZK3 213 aa13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 FTOQ9C0B1 505 aaKnown RBP eCLIP13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 CD320Q9NPF0 282 aa13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 MTMR7Q9Y216 660 aa13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 C5orf42Q9H799 3197 aa13.44□□□□□ -0.26
CTNNA1-205ENST00000517904 FAM86C2PA6NEL3 165 aa13.43□□□□□ -0.26
CTNNA1-205ENST00000517904 A6NJR5 290 aa13.43□□□□□ -0.26
CTNNA1-205ENST00000517904 TSPY2A6NKD2 308 aa13.43□□□□□ -0.26
CTNNA1-205ENST00000517904 SLC3A2P08195 630 aaKnown RBP13.43□□□□□ -0.26
CTNNA1-205ENST00000517904 NOVP48745 357 aa13.43□□□□□ -0.26
CTNNA1-205ENST00000517904 CTDSPL2Q05D32 466 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms