RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 NRIP1P48552 1158 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 CACNB3P54284 484 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 RPS8P62241 208 aaKnown RBP4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 RBM10P98175 930 aaKnown RBP4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 TDGQ13569 410 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 C6orf132Q5T0Z8 1188 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 WDR78Q5VTH9 848 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 PHLDB3Q6NSJ2 640 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 CXXC5Q7LFL8 322 aaKnown RBP4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 RAB44Q7Z6P3 723 aaPredicted RBP4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 ZDHHC14Q8IZN3 488 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 PROCA1Q8NCQ7 364 aaPredicted RBP4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 KLHDC9Q8NEP7 349 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 PJA1Q8NG27 643 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 APOL5Q9BWW9 433 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 FOXQ1Q9C009 403 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 SMOC1Q9H4F8 434 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 ZBTB3Q9H5J0 574 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 RBPJLQ9UBG7 517 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 WNT16Q9UBV4 365 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 ZNF281Q9Y2X9 895 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 MYO7AQ13402 2215 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 FLNAP21333 2647 aaKnown RBP4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 CSMD2Q7Z408 3487 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 ARHGEF17Q96PE2 2063 aaPredicted RBP4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 URB1O60287 2271 aaKnown RBP4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 JMJD1CQ15652 2540 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 HTATSF1O43719 755 aaKnown RBP4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 B4GALT4O60513 344 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 CFBP00751 764 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 RDXP35241 583 aaKnown RBP4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 RFC2P35250 354 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 SIM1P81133 766 aaPredicted RBP4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 EIF4A2Q14240 407 aaKnown RBP4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 HIC1Q14526 733 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 CCNI2Q6ZMN8 369 aaPredicted RBP4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 ATG14Q6ZNE5 492 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 RBM23Q86U06 439 aaKnown RBP4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 TDRD5Q8NAT2 981 aaKnown RBP4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 PPP2R3CQ969Q6 453 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 PAGR1Q9BTK6 254 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 EDEM2Q9BV94 578 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 FAM126AQ9BYI3 521 aaPredicted RBP4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 BCO2Q9BYV7 579 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 S1PR5Q9H228 398 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 POMKQ9H5K3 350 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 PICK1Q9NRD5 415 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 CDH22Q9UJ99 828 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 LEMD3Q9Y2U8 911 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 INSL6Q9Y581 213 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 MED13LQ71F56 2210 aa4.3□□□□□ -1.72
SCARNA13-201ENST00000516672 ACACAQ13085 2346 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 GREB1Q4ZG55 1949 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 AXIN1O15169 862 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 DCTP40126 519 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 HERVK_113P62684 666 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 ARHGAP4P98171 946 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 MAP3K10Q02779 954 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 CYP4F3Q08477 520 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 GRB14Q14449 540 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 KIF6Q6ZMV9 814 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 TTLL7Q6ZT98 887 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 DPP9Q86TI2 863 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 CCDC84Q86UT8 332 aaPredicted RBP4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 SCYL3Q8IZE3 742 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 FAM160A2Q8N612 972 aaPredicted RBP4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 SLC43A3Q8NBI5 491 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 SHCBP1Q8NEM2 672 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 MED8Q96G25 268 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 EMILIN3Q9NT22 766 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 CABIN1Q9Y6J0 2220 aa4.29□□□□□ -1.72
SCARNA13-201ENST00000516672 CELSR2Q9HCU4 2923 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 KMT2CQ8NEZ4 4911 aaKnown RBP4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 MUC22E2RYF6 1773 aaPredicted RBP4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 B4GALT3O60512 393 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 FAM155BO75949 473 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 CTNNB1P35222 781 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 PLCD1P51178 756 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 CXADRP78310 365 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 IRX3P78415 501 aaPredicted RBP4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 TRIM26Q12899 539 aaPredicted RBP4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 NFATC3Q12968 1075 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 PROX2Q3B8N5 592 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 NCBP3Q53F19 620 aaKnown RBP4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 TCEAL6Q6IPX3 200 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 TXNRD3Q86VQ6 643 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 SLF2Q8IX21 1173 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 DZIP1LQ8IYY4 767 aaKnown RBP4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 TCEAL3Q969E4 200 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 MBIPQ9NS73 344 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 IVNS1ABPQ9Y6Y0 642 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 LAMA1P25391 3075 aa4.28□□□□□ -1.72
SCARNA13-201ENST00000516672 FRMPD2Q68DX3 1309 aaPredicted RBP4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 AHCTF1Q8WYP5 2266 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 MYO16Q9Y6X6 1858 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 TREHO43280 583 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 KCNAB3O43448 404 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 HRO43593 1189 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms