RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 BCL11AQ9H165 835 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 SEMA4AQ9H3S1 761 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 EHMT1Q9H9B1 1298 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 JADE2Q9NQC1 790 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 ST6GALNAC2Q9UJ37 374 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 HCFC2Q9Y5Z7 792 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 FGF10O15520 208 aaPredicted RBP3□□□□□ -1.93
RNU6-561P-201ENST00000516222 LAMTOR5O43504 91 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 SLPIP03973 132 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 GLI4P10075 376 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 NME1P15531 152 aaKnown RBP3□□□□□ -1.93
RNU6-561P-201ENST00000516222 RPL13P26373 211 aaKnown RBP3□□□□□ -1.93
RNU6-561P-201ENST00000516222 EIF4A3P38919 411 aaKnown RBP3□□□□□ -1.93
RNU6-561P-201ENST00000516222 DLX2Q07687 328 aaPredicted RBP3□□□□□ -1.93
RNU6-561P-201ENST00000516222 SMAD4Q13485 552 aaKnown RBP3□□□□□ -1.93
RNU6-561P-201ENST00000516222 TCEAL1Q15170 157 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 CRB2Q5IJ48 1285 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 EEF1DP3Q658K8 133 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 INTS3Q68E01 1043 aaKnown RBP3□□□□□ -1.93
RNU6-561P-201ENST00000516222 CRIP3Q6Q6R5 217 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 GK5Q6ZS86 529 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 TMC4Q7Z404 712 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 ZC3H18Q86VM9 953 aaKnown RBP3□□□□□ -1.93
RNU6-561P-201ENST00000516222 FBXO27Q8NI29 283 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 SRRTQ9BXP5 876 aaKnown RBP3□□□□□ -1.93
RNU6-561P-201ENST00000516222 KLC2Q9H0B6 622 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 NGRNQ9NPE2 291 aaKnown RBP3□□□□□ -1.93
RNU6-561P-201ENST00000516222 SUCOQ9UBS9 1254 aaKnown RBP3□□□□□ -1.93
RNU6-561P-201ENST00000516222 VTI1BQ9UEU0 232 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 TCAF1Q9Y4C2 921 aa3□□□□□ -1.93
RNU6-561P-201ENST00000516222 TRBV23OR9-2A0A075B6M9 112 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 ANKRD33BA6NCL7 494 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 TNFRSF10CO14798 259 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 CYP7B1O75881 506 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 AMHP03971 560 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 CYP1A1P04798 512 aaPredicted RBP2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 ANKRD39Q53RE8 183 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 HS1BP3Q53T59 392 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 MCTP2Q6DN12 878 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 CIR1Q86X95 450 aaPredicted RBP2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 TMEM192Q8IY95 271 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 LINC00482Q8N8I6 264 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 KYQ8NBH2 561 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 SPATA6Q9NWH7 488 aaPredicted RBP2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 DIS3Q9Y2L1 958 aaKnown RBP2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 HS3ST3A1Q9Y663 406 aa2.99□□□□□ -1.93
RNU6-561P-201ENST00000516222 A0A087WZG4 1122 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 C9orf118A6NHY6 69 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 H0Y8X5 98 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 CD3EP07766 207 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 IMPDH2P12268 514 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 ITGA4P13612 1032 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 SEPHS1P49903 392 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 PURAQ00577 322 aaKnown RBP2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 APOBRQ0VD83 1088 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 SEZ6Q53EL9 994 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 PRAMEF18Q5VWM3 479 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 FBXL19Q6PCT2 694 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 CD300LDQ6UXZ3 194 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 ETV3LQ6ZN32 361 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 LIMS2Q7Z4I7 341 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 FIBCD1Q8N539 461 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 ZNF296Q8WUU4 475 aaPredicted RBP2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 FCRL3Q96P31 734 aaPredicted RBP2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 NOX5Q96PH1 765 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 C11orf84Q9BUA3 381 aaPredicted RBP2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 ZNF747Q9BV97 191 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 ZNF341Q9BYN7 854 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 KRTAP3-1Q9BYR8 98 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 AP5M1Q9H0R1 490 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 PCED1AQ9H1Q7 454 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 KBTBD4Q9NVX7 518 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 FHOD1Q9Y613 1164 aa2.98□□□□□ -1.93
RNU6-561P-201ENST00000516222 GREM1O60565 184 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 CTSHP09668 335 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 CD247P20963 164 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 THBS2P35442 1172 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 CEBPAP49715 358 aaPredicted RBP2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 PMS1P54277 932 aaKnown RBP2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 ZNF445P59923 1031 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 ARHGEF18Q6ZSZ5 1173 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 DCP2Q8IU60 420 aaKnown RBP2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 TXNDC5Q8NBS9 432 aaKnown RBP2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 BRF1Q92994 677 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 SLC9A7Q96T83 725 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 YIPF4Q9BSR8 244 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 BCAS3Q9H6U6 928 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 RXFP1Q9HBX9 757 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 GP6Q9HCN6 339 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 RNF19AQ9NV58 838 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 C11orf21Q9P2W6 132 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 PLA2G2DQ9UNK4 145 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 RWDD3Q9Y3V2 267 aa2.97□□□□□ -1.93
RNU6-561P-201ENST00000516222 WDR33Q9C0J8 1336 aaKnown RBP2.96□□□□□ -1.93
RNU6-561P-201ENST00000516222 MEIS3P2A8K0S8 358 aa2.96□□□□□ -1.94
RNU6-561P-201ENST00000516222 DDX3XO00571 662 aaKnown RBP eCLIP2.96□□□□□ -1.94
RNU6-561P-201ENST00000516222 MUSKO15146 869 aa2.96□□□□□ -1.94
RNU6-561P-201ENST00000516222 NPHS1O60500 1241 aa2.96□□□□□ -1.94
RNU6-561P-201ENST00000516222 PPFIA2O75334 1257 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms