RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CFBP00751 764 aa24.08■■□□□ 1.45
LSM6-207ENST00000515311 POLR2MP0CAP2 368 aa24.08■■□□□ 1.45
LSM6-207ENST00000515311 SYT1P21579 422 aa24.08■■□□□ 1.45
LSM6-207ENST00000515311 FOSBP53539 338 aa24.08■■□□□ 1.45
LSM6-207ENST00000515311 KCTD2Q14681 263 aa24.08■■□□□ 1.45
LSM6-207ENST00000515311 WDR78Q5VTH9 848 aa24.08■■□□□ 1.45
LSM6-207ENST00000515311 RNF207Q6ZRF8 634 aa24.08■■□□□ 1.45
LSM6-207ENST00000515311 ANKRD35Q8N283 1001 aa24.08■■□□□ 1.45
LSM6-207ENST00000515311 MMP19Q99542 508 aa24.08■■□□□ 1.45
LSM6-207ENST00000515311 BRMS1Q9HCU9 246 aa24.08■■□□□ 1.45
LSM6-207ENST00000515311 CYP39A1Q9NYL5 469 aa24.08■■□□□ 1.45
LSM6-207ENST00000515311 LCTP09848 1927 aa24.08■■□□□ 1.44
LSM6-207ENST00000515311 H3BQV1 296 aa24.07■■□□□ 1.44
LSM6-207ENST00000515311 PTPREP23469 700 aa24.07■■□□□ 1.44
LSM6-207ENST00000515311 FCGRTP55899 365 aa24.07■■□□□ 1.44
LSM6-207ENST00000515311 RPS6P62753 249 aaKnown RBP24.07■■□□□ 1.44
LSM6-207ENST00000515311 KIF22Q14807 665 aa24.07■■□□□ 1.44
LSM6-207ENST00000515311 SAFBQ15424 915 aaKnown RBP eCLIP24.07■■□□□ 1.44
LSM6-207ENST00000515311 IFFO2Q5TF58 517 aa24.07■■□□□ 1.44
LSM6-207ENST00000515311 MCTP2Q6DN12 878 aa24.07■■□□□ 1.44
LSM6-207ENST00000515311 NSMFQ6X4W1 530 aa24.07■■□□□ 1.44
LSM6-207ENST00000515311 BLIDQ8IZY5 108 aa24.07■■□□□ 1.44
LSM6-207ENST00000515311 REXO1Q8N1G1 1221 aaKnown RBP24.07■■□□□ 1.44
LSM6-207ENST00000515311 ZSWIM8A7E2V4 1837 aa24.07■■□□□ 1.44
LSM6-207ENST00000515311 SLC15A5A6NIM6 579 aa24.06■■□□□ 1.44
LSM6-207ENST00000515311 KRT2P35908 639 aa24.06■■□□□ 1.44
LSM6-207ENST00000515311 CLK2P49760 499 aaKnown RBP24.06■■□□□ 1.44
LSM6-207ENST00000515311 GUCY1B3Q02153 619 aa24.06■■□□□ 1.44
LSM6-207ENST00000515311 BAATQ14032 418 aaPredicted RBP24.06■■□□□ 1.44
LSM6-207ENST00000515311 GRB14Q14449 540 aa24.06■■□□□ 1.44
LSM6-207ENST00000515311 TBC1D5Q92609 795 aa24.06■■□□□ 1.44
LSM6-207ENST00000515311 PLXNA1Q9UIW2 1896 aa24.06■■□□□ 1.44
LSM6-207ENST00000515311 DNAJC25-GNG10A0A024R161 153 aa24.05■■□□□ 1.44
LSM6-207ENST00000515311 M0R2N6 131 aa24.05■■□□□ 1.44
LSM6-207ENST00000515311 TNPO2O14787 897 aaKnown RBP24.05■■□□□ 1.44
LSM6-207ENST00000515311 FKTNO75072 461 aa24.05■■□□□ 1.44
LSM6-207ENST00000515311 USP17L6PQ6QN14 398 aa24.05■■□□□ 1.44
LSM6-207ENST00000515311 SLC30A10Q6XR72 485 aa24.05■■□□□ 1.44
LSM6-207ENST00000515311 DOCK3Q8IZD9 2030 aa24.05■■□□□ 1.44
LSM6-207ENST00000515311 STX6O43752 255 aa24.04■■□□□ 1.44
LSM6-207ENST00000515311 FOSP01100 380 aaPredicted RBP24.04■■□□□ 1.44
LSM6-207ENST00000515311 CTGFP29279 349 aa24.04■■□□□ 1.44
LSM6-207ENST00000515311 HOXA13P31271 388 aaPredicted RBP24.04■■□□□ 1.44
LSM6-207ENST00000515311 DDIT3P35638 169 aa24.04■■□□□ 1.44
LSM6-207ENST00000515311 PSMC4P43686 418 aa24.04■■□□□ 1.44
LSM6-207ENST00000515311 AP3B2Q13367 1082 aa24.04■■□□□ 1.44
LSM6-207ENST00000515311 UBE2SQ16763 222 aa24.04■■□□□ 1.44
LSM6-207ENST00000515311 DIS3L2Q8IYB7 885 aaKnown RBP24.04■■□□□ 1.44
LSM6-207ENST00000515311 SYTL5Q8TDW5 730 aaPredicted RBP24.04■■□□□ 1.44
LSM6-207ENST00000515311 ZNF296Q8WUU4 475 aaPredicted RBP24.04■■□□□ 1.44
LSM6-207ENST00000515311 SOCS4Q8WXH5 440 aa24.04■■□□□ 1.44
LSM6-207ENST00000515311 ERO1AQ96HE7 468 aa24.04■■□□□ 1.44
LSM6-207ENST00000515311 TRIM47Q96LD4 638 aa24.04■■□□□ 1.44
LSM6-207ENST00000515311 ADAMTS3O15072 1205 aa24.03■■□□□ 1.44
LSM6-207ENST00000515311 ADORA2AP29274 412 aa24.03■■□□□ 1.44
LSM6-207ENST00000515311 MORN1Q5T089 497 aa24.03■■□□□ 1.44
LSM6-207ENST00000515311 FOXP1Q9H334 677 aaPredicted RBP24.03■■□□□ 1.44
LSM6-207ENST00000515311 TSKSQ9UJT2 592 aa24.03■■□□□ 1.44
LSM6-207ENST00000515311 CASP8AP2Q9UKL3 1982 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 VPS37CA5D8V6 355 aaPredicted RBP24.02■■□□□ 1.44
LSM6-207ENST00000515311 SPDYE3A6NKU9 549 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 POTEB2H3BUK9 544 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 GNRH1P01148 92 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 ARHGEF6Q15052 776 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 FAM133AQ8N9E0 248 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 OXER1Q8TDS5 423 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 TNFRSF25Q93038 417 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 ARHGAP39Q9C0H5 1083 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 COL20A1Q9P218 1284 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 BIN2Q9UBW5 565 aaPredicted RBP24.02■■□□□ 1.44
LSM6-207ENST00000515311 PCDHA6Q9UN73 950 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 MTMR6Q9Y217 621 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 PCDHA8Q9Y5H6 950 aa24.02■■□□□ 1.44
LSM6-207ENST00000515311 BTBD18B2RXH4 712 aa24.01■■□□□ 1.43
LSM6-207ENST00000515311 U2AF2P26368 475 aaKnown RBP eCLIP24.01■■□□□ 1.43
LSM6-207ENST00000515311 KRT25Q7Z3Z0 450 aa24.01■■□□□ 1.43
LSM6-207ENST00000515311 CD99L2Q8TCZ2 262 aa24.01■■□□□ 1.43
LSM6-207ENST00000515311 USP6NLQ92738 828 aa24.01■■□□□ 1.43
LSM6-207ENST00000515311 NUDT12Q9BQG2 462 aa24.01■■□□□ 1.43
LSM6-207ENST00000515311 TMEM260Q9NX78 707 aa24.01■■□□□ 1.43
LSM6-207ENST00000515311 FRMPD4Q14CM0 1322 aa24.01■■□□□ 1.43
LSM6-207ENST00000515311 MAP2K5Q13163 448 aa24■■□□□ 1.43
LSM6-207ENST00000515311 NR5A1Q13285 461 aa24■■□□□ 1.43
LSM6-207ENST00000515311 JAKMIP3Q5VZ66 844 aa24■■□□□ 1.43
LSM6-207ENST00000515311 FCHSD1Q86WN1 690 aa24■■□□□ 1.43
LSM6-207ENST00000515311 DNERQ8NFT8 737 aa24■■□□□ 1.43
LSM6-207ENST00000515311 RASGRP4Q8TDF6 673 aa24■■□□□ 1.43
LSM6-207ENST00000515311 EHMT1Q9H9B1 1298 aa24■■□□□ 1.43
LSM6-207ENST00000515311 SLC5A4Q9NY91 659 aa24■■□□□ 1.43
LSM6-207ENST00000515311 ADD3Q9UEY8 706 aaKnown RBP24■■□□□ 1.43
LSM6-207ENST00000515311 GJD2Q9UKL4 321 aa24■■□□□ 1.43
LSM6-207ENST00000515311 DIS3Q9Y2L1 958 aaKnown RBP24■■□□□ 1.43
LSM6-207ENST00000515311 LOC102724159A0A0B4J2E5 919 aa23.99■■□□□ 1.43
LSM6-207ENST00000515311 PGK2P07205 417 aa23.99■■□□□ 1.43
LSM6-207ENST00000515311 HOXC6P09630 235 aa23.99■■□□□ 1.43
LSM6-207ENST00000515311 CNTN2Q02246 1040 aa23.99■■□□□ 1.43
LSM6-207ENST00000515311 GNL2Q13823 731 aaKnown RBP23.99■■□□□ 1.43
LSM6-207ENST00000515311 PWP2Q15269 919 aaKnown RBP23.99■■□□□ 1.43
LSM6-207ENST00000515311 ZNF792Q3KQV3 632 aa23.99■■□□□ 1.43
LSM6-207ENST00000515311 NOSTRINQ8IVI9 506 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms