RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 ATP8B2P98198 1209 aa10.09□□□□□ -0.79
TRIM6-211ENST00000515022 NHLH1Q02575 133 aa10.09□□□□□ -0.79
TRIM6-211ENST00000515022 POTEGQ6S5H5 508 aa10.09□□□□□ -0.79
TRIM6-211ENST00000515022 EEPD1Q7L9B9 569 aa10.09□□□□□ -0.79
TRIM6-211ENST00000515022 TLK2Q86UE8 772 aa10.09□□□□□ -0.79
TRIM6-211ENST00000515022 SSH3Q8TE77 659 aa10.09□□□□□ -0.79
TRIM6-211ENST00000515022 KIFC2Q96AC6 838 aa10.09□□□□□ -0.79
TRIM6-211ENST00000515022 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRIM6-211ENST00000515022 MTUS1Q9ULD2 1270 aa10.09□□□□□ -0.79
TRIM6-211ENST00000515022 PCDHGA4Q9Y5G9 962 aa10.09□□□□□ -0.79
TRIM6-211ENST00000515022 MYH4Q9Y623 1939 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 TCRBV5S4A2TA0A5A2 114 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 USP17L12C9JPN9 530 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 USP17L21D6R901 530 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 GOLIM4O00461 696 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 MBD4O95243 580 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 NDUFB10O96000 172 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 SMPD1P17405 629 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 AACSQ86V21 672 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 GJD3Q8N144 294 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 TMEM57Q8N5G2 664 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 KCNV2Q8TDN2 545 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 FBXL18Q96ME1 805 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 PHOX2BQ99453 314 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 DNAJC2Q99543 621 aaKnown RBP10.08□□□□□ -0.8
TRIM6-211ENST00000515022 AP5M1Q9H0R1 490 aa10.08□□□□□ -0.8
TRIM6-211ENST00000515022 ALDH8A1Q9H2A2 487 aaPredicted RBP10.08□□□□□ -0.8
TRIM6-211ENST00000515022 GNEQ9Y223 722 aaKnown RBP10.08□□□□□ -0.8
TRIM6-211ENST00000515022 CTDP1Q9Y5B0 961 aaPredicted RBP10.08□□□□□ -0.8
TRIM6-211ENST00000515022 C5orf42Q9H799 3197 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 SOWAHBA6NEL2 793 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 PRR33A8MZF0 331 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 IGSF3O75054 1194 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 ZBED4O75132 1171 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 IL9P15248 144 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 C12orf60Q5U649 245 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 C16orf86Q6ZW13 317 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 HERC6Q8IVU3 1022 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 FBXO16Q8IX29 292 aaPredicted RBP10.07□□□□□ -0.8
TRIM6-211ENST00000515022 FAM178BQ8IXR5 827 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 FTSJ3Q8IY81 847 aaKnown RBP10.07□□□□□ -0.8
TRIM6-211ENST00000515022 CCDC17Q96LX7 622 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 FTOQ9C0B1 505 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRIM6-211ENST00000515022 UBE2ZQ9H832 354 aaPredicted RBP10.07□□□□□ -0.8
TRIM6-211ENST00000515022 KANSL2Q9H9L4 492 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 IL1RAPL2Q9NP60 686 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 SPTBN4Q9H254 2564 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 USP34Q70CQ2 3546 aa10.07□□□□□ -0.8
TRIM6-211ENST00000515022 CFAP54Q96N23 3096 aa10.06□□□□□ -0.8
TRIM6-211ENST00000515022 F5H6K3 240 aa10.06□□□□□ -0.8
TRIM6-211ENST00000515022 CABYRO75952 493 aa10.06□□□□□ -0.8
TRIM6-211ENST00000515022 KCNA5P22460 613 aa10.06□□□□□ -0.8
TRIM6-211ENST00000515022 SNAP25P60880 206 aa10.06□□□□□ -0.8
TRIM6-211ENST00000515022 NKX3-2P78367 333 aa10.06□□□□□ -0.8
TRIM6-211ENST00000515022 KLRC3Q07444 240 aa10.06□□□□□ -0.8
TRIM6-211ENST00000515022 CSPP1Q1MSJ5 1256 aa10.06□□□□□ -0.8
TRIM6-211ENST00000515022 FAM47CQ5HY64 1035 aa10.06□□□□□ -0.8
TRIM6-211ENST00000515022 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.06□□□□□ -0.8
TRIM6-211ENST00000515022 PURBQ96QR8 312 aaKnown RBP10.06□□□□□ -0.8
TRIM6-211ENST00000515022 CHMP4BQ9H444 224 aaKnown RBP10.06□□□□□ -0.8
TRIM6-211ENST00000515022 ISY1Q9ULR0 285 aaKnown RBP10.06□□□□□ -0.8
TRIM6-211ENST00000515022 EXOC6BQ9Y2D4 811 aa10.06□□□□□ -0.8
TRIM6-211ENST00000515022 NOP58Q9Y2X3 529 aaKnown RBP10.06□□□□□ -0.8
TRIM6-211ENST00000515022 PTPRZ1P23471 2315 aaPredicted RBP10.06□□□□□ -0.8
TRIM6-211ENST00000515022 TNKSO95271 1327 aa10.06□□□□□ -0.8
TRIM6-211ENST00000515022 DPYSL4O14531 572 aa10.05□□□□□ -0.8
TRIM6-211ENST00000515022 ST18O60284 1047 aa10.05□□□□□ -0.8
TRIM6-211ENST00000515022 ZEB2O60315 1214 aa10.05□□□□□ -0.8
TRIM6-211ENST00000515022 CENPBP07199 599 aaPredicted RBP10.05□□□□□ -0.8
TRIM6-211ENST00000515022 MYL3P08590 195 aa10.05□□□□□ -0.8
TRIM6-211ENST00000515022 ACTN1P12814 892 aa10.05□□□□□ -0.8
TRIM6-211ENST00000515022 CHMP4BP1P59074 171 aa10.05□□□□□ -0.8
TRIM6-211ENST00000515022 FAM133AQ8N9E0 248 aa10.05□□□□□ -0.8
TRIM6-211ENST00000515022 PRPF38AQ8NAV1 312 aaKnown RBP10.05□□□□□ -0.8
TRIM6-211ENST00000515022 SLC9A7Q96T83 725 aa10.05□□□□□ -0.8
TRIM6-211ENST00000515022 SLC38A10Q9HBR0 1119 aa10.05□□□□□ -0.8
TRIM6-211ENST00000515022 LCTP09848 1927 aa10.05□□□□□ -0.8
TRIM6-211ENST00000515022 GREB1LQ9C091 1923 aaPredicted RBP10.05□□□□□ -0.8
TRIM6-211ENST00000515022 KIF28PB7ZC32 967 aa10.04□□□□□ -0.8
TRIM6-211ENST00000515022 HOXB1P14653 301 aaPredicted RBP10.04□□□□□ -0.8
TRIM6-211ENST00000515022 ARSIQ5FYB1 569 aa10.04□□□□□ -0.8
TRIM6-211ENST00000515022 PTCRAQ6ISU1 281 aaPredicted RBP10.04□□□□□ -0.8
TRIM6-211ENST00000515022 TAPT1Q6NXT6 567 aa10.04□□□□□ -0.8
TRIM6-211ENST00000515022 FAM117BQ6P1L5 589 aa10.04□□□□□ -0.8
TRIM6-211ENST00000515022 CTR9Q6PD62 1173 aa10.04□□□□□ -0.8
TRIM6-211ENST00000515022 LRRC47Q8N1G4 583 aaKnown RBP10.04□□□□□ -0.8
TRIM6-211ENST00000515022 CHST13Q8NET6 341 aa10.04□□□□□ -0.8
TRIM6-211ENST00000515022 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.04□□□□□ -0.8
TRIM6-211ENST00000515022 A1CFQ9NQ94 594 aaKnown RBP10.04□□□□□ -0.8
TRIM6-211ENST00000515022 RNF146Q9NTX7 359 aa10.04□□□□□ -0.8
TRIM6-211ENST00000515022 CLIP2Q9UDT6 1046 aa10.04□□□□□ -0.8
TRIM6-211ENST00000515022 CACNA1AO00555 2505 aa10.04□□□□□ -0.8
TRIM6-211ENST00000515022 TANC1Q9C0D5 1861 aa10.04□□□□□ -0.8
TRIM6-211ENST00000515022 ZFHX2Q9C0A1 2572 aaPredicted RBP10.04□□□□□ -0.8
TRIM6-211ENST00000515022 TECTAO75443 2155 aa10.04□□□□□ -0.8
TRIM6-211ENST00000515022 SCN10AQ9Y5Y9 1956 aa10.03□□□□□ -0.8
TRIM6-211ENST00000515022 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.03□□□□□ -0.8
TRIM6-211ENST00000515022 H3BQ06 376 aaPredicted RBP10.03□□□□□ -0.8
TRIM6-211ENST00000515022 ATP2A1O14983 1001 aa10.03□□□□□ -0.8
TRIM6-211ENST00000515022 PFKMP08237 780 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms