RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 ORC4O43929 436 aa27■■□□□ 1.91
SMAD1-214ENST00000514831 ALDH5A1P51649 535 aaPredicted RBP27■■□□□ 1.91
SMAD1-214ENST00000514831 MRPS5P82675 430 aaKnown RBP27■■□□□ 1.91
SMAD1-214ENST00000514831 BTNL9Q6UXG8 535 aa27■■□□□ 1.91
SMAD1-214ENST00000514831 POLR3EQ9NVU0 708 aa27■■□□□ 1.91
SMAD1-214ENST00000514831 SLC4A7Q9Y6M7 1214 aa27■■□□□ 1.91
SMAD1-214ENST00000514831 SCN5AQ14524 2016 aa26.99■■□□□ 1.91
SMAD1-214ENST00000514831 RANBP6O60518 1105 aaKnown RBP26.99■■□□□ 1.91
SMAD1-214ENST00000514831 PFKMP08237 780 aa26.99■■□□□ 1.91
SMAD1-214ENST00000514831 MX1P20591 662 aa26.99■■□□□ 1.91
SMAD1-214ENST00000514831 CCDC85BQ15834 202 aaPredicted RBP26.99■■□□□ 1.91
SMAD1-214ENST00000514831 PPP2R2DQ66LE6 453 aa26.99■■□□□ 1.91
SMAD1-214ENST00000514831 ADAMTS19Q8TE59 1207 aa26.99■■□□□ 1.91
SMAD1-214ENST00000514831 SCLYQ96I15 445 aa26.99■■□□□ 1.91
SMAD1-214ENST00000514831 MTMR7Q9Y216 660 aa26.99■■□□□ 1.91
SMAD1-214ENST00000514831 PCDHA11Q9Y5I1 949 aa26.99■■□□□ 1.91
SMAD1-214ENST00000514831 CHD7Q9P2D1 2997 aa26.98■■□□□ 1.91
SMAD1-214ENST00000514831 NFIBO00712 420 aa26.98■■□□□ 1.91
SMAD1-214ENST00000514831 FGRP09769 529 aa26.98■■□□□ 1.91
SMAD1-214ENST00000514831 SUPT20HL2P0C7V6 817 aa26.98■■□□□ 1.91
SMAD1-214ENST00000514831 RABGGTBP53611 331 aa26.98■■□□□ 1.91
SMAD1-214ENST00000514831 PURAQ00577 322 aaKnown RBP26.98■■□□□ 1.91
SMAD1-214ENST00000514831 BAATQ14032 418 aaPredicted RBP26.98■■□□□ 1.91
SMAD1-214ENST00000514831 NCOR1O75376 2440 aa26.98■■□□□ 1.91
SMAD1-214ENST00000514831 TNKSO95271 1327 aa26.97■■□□□ 1.91
SMAD1-214ENST00000514831 SALL3Q9BXA9 1300 aa26.97■■□□□ 1.91
SMAD1-214ENST00000514831 RBM47A0AV96 593 aaKnown RBP26.97■■□□□ 1.91
SMAD1-214ENST00000514831 CPT1AP50416 773 aa26.97■■□□□ 1.91
SMAD1-214ENST00000514831 VPS53Q5VIR6 699 aa26.97■■□□□ 1.91
SMAD1-214ENST00000514831 SYDE2Q5VT97 1194 aa26.97■■□□□ 1.91
SMAD1-214ENST00000514831 TTBK2Q6IQ55 1244 aa26.97■■□□□ 1.91
SMAD1-214ENST00000514831 WDR11Q9BZH6 1224 aa26.97■■□□□ 1.91
SMAD1-214ENST00000514831 TRMT13Q9NUP7 481 aaKnown RBP26.97■■□□□ 1.91
SMAD1-214ENST00000514831 ZBBXA8MT70 800 aa26.96■■□□□ 1.91
SMAD1-214ENST00000514831 ATP2A2P16615 1042 aaKnown RBP26.96■■□□□ 1.91
SMAD1-214ENST00000514831 SLC16A2P36021 539 aa26.96■■□□□ 1.91
SMAD1-214ENST00000514831 PCDHB15Q9Y5E8 787 aa26.95■■□□□ 1.9
SMAD1-214ENST00000514831 PTPDC1A2A3K4 754 aa26.94■■□□□ 1.9
SMAD1-214ENST00000514831 TOP1P11387 765 aaKnown RBP26.94■■□□□ 1.9
SMAD1-214ENST00000514831 CYP2C9P11712 490 aa26.94■■□□□ 1.9
SMAD1-214ENST00000514831 MYOGP15173 224 aa26.94■■□□□ 1.9
SMAD1-214ENST00000514831 COL9A1P20849 921 aa26.94■■□□□ 1.9
SMAD1-214ENST00000514831 TTLL4Q14679 1199 aa26.94■■□□□ 1.9
SMAD1-214ENST00000514831 ALX1Q15699 326 aa26.94■■□□□ 1.9
SMAD1-214ENST00000514831 SLC30A10Q6XR72 485 aa26.94■■□□□ 1.9
SMAD1-214ENST00000514831 OR6J1Q8NGC5 347 aa26.94■■□□□ 1.9
SMAD1-214ENST00000514831 UHRF1Q96T88 793 aaPredicted RBP26.94■■□□□ 1.9
SMAD1-214ENST00000514831 MTG1Q9BT17 334 aaPredicted RBP26.94■■□□□ 1.9
SMAD1-214ENST00000514831 FRMPD2Q68DX3 1309 aaPredicted RBP26.93■■□□□ 1.9
SMAD1-214ENST00000514831 MYL3P08590 195 aa26.93■■□□□ 1.9
SMAD1-214ENST00000514831 IL27Q8NEV9 243 aa26.93■■□□□ 1.9
SMAD1-214ENST00000514831 CLEC4DQ8WXI8 215 aa26.93■■□□□ 1.9
SMAD1-214ENST00000514831 TMEM47Q9BQJ4 181 aa26.93■■□□□ 1.9
SMAD1-214ENST00000514831 TSPYL2Q9H2G4 693 aaPredicted RBP26.93■■□□□ 1.9
SMAD1-214ENST00000514831 PNMA2Q9UL42 364 aa26.93■■□□□ 1.9
SMAD1-214ENST00000514831 RAD50Q92878 1312 aa26.92■■□□□ 1.9
SMAD1-214ENST00000514831 NKRFO15226 690 aaKnown RBP eCLIP26.92■■□□□ 1.9
SMAD1-214ENST00000514831 GPHNQ9NQX3 736 aaPredicted RBP26.92■■□□□ 1.9
SMAD1-214ENST00000514831 HELLSQ9NRZ9 838 aa26.92■■□□□ 1.9
SMAD1-214ENST00000514831 TCP11L1Q9NUJ3 509 aa26.92■■□□□ 1.9
SMAD1-214ENST00000514831 PDHBP11177 359 aa26.91■■□□□ 1.9
SMAD1-214ENST00000514831 EDNRBP24530 442 aa26.91■■□□□ 1.9
SMAD1-214ENST00000514831 RFC2P35250 354 aa26.91■■□□□ 1.9
SMAD1-214ENST00000514831 PPP2R5BQ15173 497 aa26.91■■□□□ 1.9
SMAD1-214ENST00000514831 BRDTQ58F21 947 aaPredicted RBP26.91■■□□□ 1.9
SMAD1-214ENST00000514831 NFRKBQ6P4R8 1299 aa26.91■■□□□ 1.9
SMAD1-214ENST00000514831 RNF207Q6ZRF8 634 aa26.91■■□□□ 1.9
SMAD1-214ENST00000514831 DEFB128Q7Z7B8 93 aa26.91■■□□□ 1.9
SMAD1-214ENST00000514831 EVI5LQ96CN4 794 aa26.91■■□□□ 1.9
SMAD1-214ENST00000514831 MPHOSPH6Q99547 160 aaKnown RBP26.91■■□□□ 1.9
SMAD1-214ENST00000514831 GPCPD1Q9NPB8 672 aa26.91■■□□□ 1.9
SMAD1-214ENST00000514831 TOMM22Q9NS69 142 aa26.91■■□□□ 1.9
SMAD1-214ENST00000514831 ZMYM6O95789 1325 aa26.9■■□□□ 1.9
SMAD1-214ENST00000514831 WDR19Q8NEZ3 1342 aa26.9■■□□□ 1.9
SMAD1-214ENST00000514831 PITPNM1O00562 1244 aa26.9■■□□□ 1.9
SMAD1-214ENST00000514831 CALML3P27482 149 aa26.9■■□□□ 1.9
SMAD1-214ENST00000514831 PDE4DQ08499 809 aa26.9■■□□□ 1.9
SMAD1-214ENST00000514831 FAM47CQ5HY64 1035 aa26.9■■□□□ 1.9
SMAD1-214ENST00000514831 TMEM67Q5HYA8 995 aa26.9■■□□□ 1.9
SMAD1-214ENST00000514831 SCFD2Q8WU76 684 aa26.9■■□□□ 1.9
SMAD1-214ENST00000514831 SLC9A7Q96T83 725 aa26.9■■□□□ 1.9
SMAD1-214ENST00000514831 KPNA6O60684 536 aa26.89■■□□□ 1.9
SMAD1-214ENST00000514831 CA3P07451 260 aa26.89■■□□□ 1.9
SMAD1-214ENST00000514831 ACTN1P12814 892 aa26.89■■□□□ 1.9
SMAD1-214ENST00000514831 NBPF20Q3BBV1 942 aa26.89■■□□□ 1.9
SMAD1-214ENST00000514831 RRP12Q5JTH9 1297 aaKnown RBP26.89■■□□□ 1.9
SMAD1-214ENST00000514831 MICALL1Q8N3F8 863 aa26.89■■□□□ 1.9
SMAD1-214ENST00000514831 DNERQ8NFT8 737 aa26.89■■□□□ 1.9
SMAD1-214ENST00000514831 TCF20Q9UGU0 1960 aaKnown RBP26.89■■□□□ 1.89
SMAD1-214ENST00000514831 PRRC2BQ5JSZ5 2229 aaKnown RBP26.89■■□□□ 1.89
SMAD1-214ENST00000514831 A6NJR5 290 aa26.88■■□□□ 1.89
SMAD1-214ENST00000514831 FGAP02671 866 aa26.88■■□□□ 1.89
SMAD1-214ENST00000514831 POU3F3P20264 500 aaPredicted RBP26.88■■□□□ 1.89
SMAD1-214ENST00000514831 RPS6P62753 249 aaKnown RBP26.88■■□□□ 1.89
SMAD1-214ENST00000514831 PTPN11Q06124 597 aaPredicted RBP26.88■■□□□ 1.89
SMAD1-214ENST00000514831 ZNF543Q08ER8 600 aa26.88■■□□□ 1.89
SMAD1-214ENST00000514831 PTPRSQ13332 1948 aa26.87■■□□□ 1.89
SMAD1-214ENST00000514831 SNHG28P0DPA3 235 aa26.87■■□□□ 1.89
SMAD1-214ENST00000514831 PHOSPHO2Q8TCD6 241 aa26.87■■□□□ 1.89
SMAD1-214ENST00000514831 TET1Q8NFU7 2136 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms