RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MYH7BA7E2Y1 1941 aa13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 MEIS2O14770 477 aa13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 DTNBO60941 627 aa13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 ERCC3P19447 782 aa13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 U2AF2P26368 475 aaKnown RBP eCLIP13.75□□□□□ -0.213e-9■■■■■ 33.8
PDLIM5-220ENST00000514830 SLC4A3P48751 1232 aa13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 ADCY7P51828 1080 aa13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 NLRP5P59047 1200 aa13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 PLS1Q14651 629 aa13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 MUM1L1Q5H9M0 696 aa13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 FOXP1Q9H334 677 aaPredicted RBP13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 CPA4Q9UI42 421 aa13.75□□□□□ -0.21
PDLIM5-220ENST00000514830 LOC102724159A0A0B4J2E5 919 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 GCOM1H8Y6P7 765 aaPredicted RBP13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 NFIBO00712 420 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 STX6O43752 255 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 TRPA1O75762 1119 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 FOSP01100 380 aaPredicted RBP13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 POLR2MP0CAP2 368 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 AP3B2Q13367 1082 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 PWP2Q15269 919 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 SAFBQ15424 915 aaKnown RBP eCLIP13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 NCAPG2Q86XI2 1143 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 BLIDQ8IZY5 108 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 TNFRSF25Q93038 417 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 PORCNQ9H237 461 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 R3HDMLQ9H3Y0 253 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 BRMS1Q9HCU9 246 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 A1CFQ9NQ94 594 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 GJB4Q9NTQ9 266 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 CYP39A1Q9NYL5 469 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 KCNJ14Q9UNX9 436 aa13.74□□□□□ -0.21
PDLIM5-220ENST00000514830 FRMPD4Q14CM0 1322 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 DNAJC25-GNG10A0A024R161 153 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 H3BQV1 296 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 PEX10O60683 326 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 FCER1AP12319 257 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 KRT2P35908 639 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 GRB14Q14449 540 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 RNF207Q6ZRF8 634 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 DIS3L2Q8IYB7 885 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 EFCC1Q9HA90 598 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 HOMER2Q9NSB8 354 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 MTMR6Q9Y217 621 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 LRRC37A2A6NM11 1700 aa13.73□□□□□ -0.21
PDLIM5-220ENST00000514830 ZSWIM8A7E2V4 1837 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 SLC15A5A6NIM6 579 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 GPR25O00155 361 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 TBC1D8O95759 1140 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 GNRH1P01148 92 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 TAL1P17542 331 aaPredicted RBP13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 PTPREP23469 700 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 RPS6P62753 249 aaKnown RBP13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 NUCB2P80303 420 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 LACTBP83111 547 aaPredicted RBP13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 SP3Q02447 781 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 KCTD2Q14681 263 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 PKN2Q16513 984 aaKnown RBP13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 GPR142Q7Z601 462 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 PLEKHH3Q7Z736 793 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 SPRYD3Q8NCJ5 442 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 PCDHA6Q9UN73 950 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 DIS3Q9Y2L1 958 aaKnown RBP13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 PCDHA8Q9Y5H6 950 aa13.72□□□□□ -0.21
PDLIM5-220ENST00000514830 RPTORQ8N122 1335 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 BRD1O95696 1058 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 CFBP00751 764 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 HOXC6P09630 235 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 MORN1Q5T089 497 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 USP17L6PQ6QN14 398 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 KRT25Q7Z3Z0 450 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 BRAPQ7Z569 592 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 CTU1Q7Z7A3 348 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 NOSTRINQ8IVI9 506 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 CCAR1Q8IX12 1150 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 ANKRD35Q8N283 1001 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 FAM133AQ8N9E0 248 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 DNERQ8NFT8 737 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 SYTL5Q8TDW5 730 aaPredicted RBP13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 TBC1D5Q92609 795 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 USP6NLQ92738 828 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 MMP19Q99542 508 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 ZSCAN16Q9H4T2 348 aaPredicted RBP13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
PDLIM5-220ENST00000514830 KIAA1217Q5T5P2 1943 aa13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 BTBD18B2RXH4 712 aa13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 ZSCAN22P10073 491 aaPredicted RBP13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 FCGRTP55899 365 aa13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 GUCY1B3Q02153 619 aa13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 BAATQ14032 418 aaPredicted RBP13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 KIF22Q14807 665 aa13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 NSMFQ6X4W1 530 aa13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 SLC30A10Q6XR72 485 aa13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 OXER1Q8TDS5 423 aa13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 CRYGNQ8WXF5 182 aa13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 SOCS4Q8WXH5 440 aa13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 ERO1AQ96HE7 468 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms