RNA–Protein interactions for RNA: ENST00000514326.5

SEC31A-238, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 3

Gene SEC31A, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-238	ENST00000514326	RIOX1	Q9H6W3	641 aa		18.3	■□□□□ 0.52
SEC31A-238	ENST00000514326	DNAH12	Q6ZR08	3092 aa		18.3	■□□□□ 0.52
SEC31A-238	ENST00000514326	LCT	P09848	1927 aa		18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	ZBTB5	O15062	677 aa		18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	KCNA10	Q16322	511 aa		18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	NFXL1	Q6ZNB6	911 aa		18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	NOL8	Q76FK4	1167 aa	Known RBP	18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	RAB11FIP4	Q86YS3	637 aa		18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	PIBF1	Q8WXW3	757 aa		18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	MTA3	Q9BTC8	594 aa		18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	AMN	Q9BXJ7	453 aa		18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	COL20A1	Q9P218	1284 aa		18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	RBM27	Q9P2N5	1060 aa	Known RBP	18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	ATP11B	Q9Y2G3	1177 aa		18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326	MRPL11	Q9Y3B7	192 aa	Known RBP	18.29	■□□□□ 0.52
SEC31A-238	ENST00000514326		A0A1W2PQ45	241 aa	Predicted RBP	18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326		A0A1W2PQY0	241 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	CCDC69	A6NI79	296 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	OPLAH	O14841	1288 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	C6orf222	P0C671	652 aa	Predicted RBP	18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	SMPD1	P17405	629 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	RXRA	P19793	462 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	ACLY	P53396	1101 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	GJA9	P57773	515 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	ADCK5	Q3MIX3	580 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	TCEANC2	Q96MN5	208 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	NEK1	Q96PY6	1258 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	TAAR1	Q96RJ0	339 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	UPF3A	Q9H1J1	476 aa	Known RBP	18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	PRO3102	Q9H379	93 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	VTA1	Q9NP79	307 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	PCDHA1	Q9Y5I3	950 aa		18.28	■□□□□ 0.52
SEC31A-238	ENST00000514326	CTAGE5	O15320	804 aa		18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	DDAH1	O94760	285 aa		18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	BEX3	Q00994	111 aa		18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	PDE4D	Q08499	809 aa		18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	TRIM60	Q495X7	471 aa		18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	IQSEC1	Q6DN90	963 aa		18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	MCF2L2	Q86YR7	1114 aa		18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	TMTC2	Q8N394	836 aa		18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	DNER	Q8NFT8	737 aa		18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	TSEN34	Q9BSV6	310 aa	Known RBP	18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	SPC25	Q9HBM1	224 aa		18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	GNE	Q9Y223	722 aa	Known RBP	18.27	■□□□□ 0.52
SEC31A-238	ENST00000514326	LOC102724159	A0A0B4J2E5	919 aa		18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	DYNC1LI2	O43237	492 aa	Predicted RBP	18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	PLEKHA8P1	O95397	391 aa		18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	CFB	P00751	764 aa		18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	EDNRB	P24530	442 aa		18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	CST5	P28325	142 aa	Predicted RBP	18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	LIFR	P42702	1097 aa		18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	EXOSC10	Q01780	885 aa	Known RBP	18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	SNX17	Q15036	470 aa		18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	PWP2	Q15269	919 aa	Known RBP	18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	TSGA10IP	Q3SY00	556 aa		18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	GNAS	Q5JWF2	1037 aa		18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	ERICH6B	Q5W0A0	696 aa		18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	CTCFL	Q8NI51	663 aa	Predicted RBP	18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	MAP3K14	Q99558	947 aa		18.26	■□□□□ 0.51
SEC31A-238	ENST00000514326	PNMA6F	A0A0J9YX94	578 aa		18.25	■□□□□ 0.51
SEC31A-238	ENST00000514326	ASGR1	P07306	291 aa		18.25	■□□□□ 0.51
SEC31A-238	ENST00000514326	KIF5B	P33176	963 aa		18.25	■□□□□ 0.51
SEC31A-238	ENST00000514326	MAGEA10	P43363	369 aa	Predicted RBP	18.25	■□□□□ 0.51
SEC31A-238	ENST00000514326	TLK2	Q86UE8	772 aa		18.25	■□□□□ 0.51
SEC31A-238	ENST00000514326	CMTR1	Q8N1G2	835 aa	Known RBP	18.25	■□□□□ 0.51
SEC31A-238	ENST00000514326	SRBD1	Q8N5C6	995 aa	Known RBP	18.25	■□□□□ 0.51
SEC31A-238	ENST00000514326	GDF15	Q99988	308 aa		18.25	■□□□□ 0.51
SEC31A-238	ENST00000514326	WDR11	Q9BZH6	1224 aa		18.25	■□□□□ 0.51
SEC31A-238	ENST00000514326	AP5M1	Q9H0R1	490 aa		18.25	■□□□□ 0.51
SEC31A-238	ENST00000514326	LRRC37A2	A6NM11	1700 aa		18.25	■□□□□ 0.51
SEC31A-238	ENST00000514326	RBM47	A0AV96	593 aa	Known RBP	18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	MOXD2P	A6NHM9	499 aa		18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	CPA1	P15085	419 aa		18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	HOXA13	P31271	388 aa	Predicted RBP	18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	NKX3-2	P78367	333 aa		18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	TLE2	Q04725	743 aa		18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	DHX32	Q7L7V1	743 aa	Known RBP	18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	KCNB2	Q92953	911 aa		18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	RMDN3	Q96TC7	470 aa		18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	SPZ1	Q9BXG8	430 aa		18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	MAF1	Q9H063	256 aa		18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	STARD7	Q9NQZ5	370 aa		18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	SLC12A7	Q9Y666	1083 aa		18.24	■□□□□ 0.51
SEC31A-238	ENST00000514326	RANBP2	P49792	3224 aa	Known RBP	18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	EIF2AK2	P19525	551 aa	Known RBP	18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	HSPA4	P34932	840 aa		18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	HSD17B4	P51659	736 aa		18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	KRT32	Q14532	448 aa		18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	DUSP28	Q4G0W2	176 aa		18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	C1orf53	Q5VUE5	145 aa		18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	SGMS1	Q86VZ5	419 aa		18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	PCSK9	Q8NBP7	692 aa	Known RBP	18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	NSUN6	Q8TEA1	469 aa	Known RBP	18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	MPHOSPH6	Q99547	160 aa	Known RBP	18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	BRPF3	Q9ULD4	1205 aa		18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326	SNX14	Q9Y5W7	946 aa		18.23	■□□□□ 0.51
SEC31A-238	ENST00000514326		B4DLN1	442 aa		18.22	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms