RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 ASB11Q8WXH4 323 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 DIO2Q92813 273 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 MAGEB10Q96LZ2 347 aaPredicted RBP6.15□□□□□ -1.42
NIPBL-207ENST00000513819 SEMA6BQ9H3T3 888 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 INTS7Q9NVH2 962 aaKnown RBP6.15□□□□□ -1.42
NIPBL-207ENST00000513819 PCDHA8Q9Y5H6 950 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 NPFFR2Q9Y5X5 522 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 NPHP3-ACAD11A0A0J9YXS1 232 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 FAM83GA6ND36 823 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 AQP7O14520 342 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 STAT3P40763 770 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 GUCY1A3Q02108 690 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 PRKCQQ04759 706 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 KCNAB2Q13303 367 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 IKZF1Q13422 519 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 LAPTM5Q13571 262 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 E4F1Q66K89 784 aaPredicted RBP6.14□□□□□ -1.43
NIPBL-207ENST00000513819 RNF180Q86T96 592 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 MTDHQ86UE4 582 aaKnown RBP6.14□□□□□ -1.43
NIPBL-207ENST00000513819 RCBTB1Q8NDN9 531 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 GPR27Q9NS67 375 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 ERVK13-1Q9NX77 482 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 VAV3Q9UKW4 847 aa6.14□□□□□ -1.43
NIPBL-207ENST00000513819 TCRBV16S1A1N1A0A5B0 115 aa6.13□□□□□ -1.43
NIPBL-207ENST00000513819 ASLP04424 464 aa6.13□□□□□ -1.43
NIPBL-207ENST00000513819 IGFALSP35858 605 aa6.13□□□□□ -1.43
NIPBL-207ENST00000513819 GPR85P60893 370 aa6.13□□□□□ -1.43
NIPBL-207ENST00000513819 TESK1Q15569 626 aa6.13□□□□□ -1.43
NIPBL-207ENST00000513819 CT47A1Q5JQC4 288 aaPredicted RBP6.13□□□□□ -1.43
NIPBL-207ENST00000513819 IFNL3Q8IZI9 196 aa6.13□□□□□ -1.43
NIPBL-207ENST00000513819 TMEM52Q8NDY8 209 aa6.13□□□□□ -1.43
NIPBL-207ENST00000513819 DDX1Q92499 740 aaKnown RBP6.13□□□□□ -1.43
NIPBL-207ENST00000513819 MMP19Q99542 508 aa6.13□□□□□ -1.43
NIPBL-207ENST00000513819 CAAP1Q9H8G2 361 aa6.13□□□□□ -1.43
NIPBL-207ENST00000513819 CARS2Q9HA77 564 aaKnown RBP6.13□□□□□ -1.43
NIPBL-207ENST00000513819 KPNA6O60684 536 aa6.12□□□□□ -1.43
NIPBL-207ENST00000513819 POU3F3P20264 500 aaPredicted RBP6.12□□□□□ -1.43
NIPBL-207ENST00000513819 ENDOUP21128 410 aaKnown RBP6.12□□□□□ -1.43
NIPBL-207ENST00000513819 SOX5P35711 763 aa6.12□□□□□ -1.43
NIPBL-207ENST00000513819 CEBPAP49715 358 aaPredicted RBP6.12□□□□□ -1.43
NIPBL-207ENST00000513819 NEK4P51957 841 aa6.12□□□□□ -1.43
NIPBL-207ENST00000513819 PCBP1Q15365 356 aaKnown RBP eCLIP6.12□□□□□ -1.43
NIPBL-207ENST00000513819 IQCEQ6IPM2 695 aa6.12□□□□□ -1.43
NIPBL-207ENST00000513819 RSPO2Q6UXX9 243 aaPredicted RBP6.12□□□□□ -1.43
NIPBL-207ENST00000513819 JAMLQ86YT9 394 aa6.12□□□□□ -1.43
NIPBL-207ENST00000513819 LEO1Q8WVC0 666 aaPredicted RBP6.12□□□□□ -1.43
NIPBL-207ENST00000513819 FCRL2Q96LA5 508 aaPredicted RBP6.12□□□□□ -1.43
NIPBL-207ENST00000513819 ZFYVE21Q9BQ24 234 aa6.12□□□□□ -1.43
NIPBL-207ENST00000513819 BSDC1Q9NW68 430 aaPredicted RBP6.12□□□□□ -1.43
NIPBL-207ENST00000513819 MAPRE3Q9UPY8 281 aa6.12□□□□□ -1.43
NIPBL-207ENST00000513819 ZNF281Q9Y2X9 895 aa6.12□□□□□ -1.43
NIPBL-207ENST00000513819 PCDHA2Q9Y5H9 948 aa6.12□□□□□ -1.43
NIPBL-207ENST00000513819 TRBV23OR9-2A0A075B6M9 112 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 TBC1D8O95759 1140 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 JMJD7P0C870 316 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 CD8BP10966 210 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 GRIK1P39086 918 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 PKN3Q6P5Z2 889 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 ABHD17CQ6PCB6 329 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 CYP2R1Q6VVX0 501 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 LBX2Q6XYB7 198 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 ZNF574Q6ZN55 896 aaPredicted RBP6.11□□□□□ -1.43
NIPBL-207ENST00000513819 SPRED2Q7Z698 418 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 RPUSD2Q8IZ73 545 aaKnown RBP6.11□□□□□ -1.43
NIPBL-207ENST00000513819 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.11□□□□□ -1.43
NIPBL-207ENST00000513819 BCL7CQ8WUZ0 217 aaPredicted RBP6.11□□□□□ -1.43
NIPBL-207ENST00000513819 MISP3Q96FF7 219 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 MTFR1LQ9H019 292 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 PPARGC1AQ9UBK2 798 aaKnown RBP6.11□□□□□ -1.43
NIPBL-207ENST00000513819 EBF1Q9UH73 591 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 FBXL7Q9UJT9 491 aa6.11□□□□□ -1.43
NIPBL-207ENST00000513819 C7orf72A4D263 438 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 MED26O95402 600 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 IGHA1P01876 353 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 SRGAP2CP0DJJ0 459 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 KCNA6P17658 529 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 EVA1CP58658 441 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 NFKB2Q00653 900 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 ZP2Q05996 745 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 SEPT7Q16181 437 aaKnown RBP6.1□□□□□ -1.43
NIPBL-207ENST00000513819 CFAP100Q494V2 611 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 RALGPS1Q5JS13 557 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 PIK3R6Q5UE93 754 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 CDCA2Q69YH5 1023 aaPredicted RBP6.1□□□□□ -1.43
NIPBL-207ENST00000513819 STRA8Q7Z7C7 330 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 WFDC3Q8IUB2 231 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 ZC3H7AQ8IWR0 971 aaKnown RBP6.1□□□□□ -1.43
NIPBL-207ENST00000513819 PPM1KQ8N3J5 372 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 HHIPL1Q96JK4 782 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 CHAMP1Q96JM3 812 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 G6PC3Q9BUM1 346 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 BTG4Q9NY30 223 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 SLAMF8Q9P0V8 285 aa6.1□□□□□ -1.43
NIPBL-207ENST00000513819 ARVCFO00192 962 aa6.09□□□□□ -1.43
NIPBL-207ENST00000513819 MYO1BO43795 1136 aa6.09□□□□□ -1.43
NIPBL-207ENST00000513819 NPHS1O60500 1241 aa6.09□□□□□ -1.43
NIPBL-207ENST00000513819 COBLO75128 1261 aa6.09□□□□□ -1.43
NIPBL-207ENST00000513819 APPP05067 770 aa6.09□□□□□ -1.43
NIPBL-207ENST00000513819 NAT1P18440 290 aa6.09□□□□□ -1.43
NIPBL-207ENST00000513819 POU3F2P20265 443 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms