RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CLK2P49760 499 aaKnown RBP14.38□□□□□ -0.11
PDPN-210ENST00000513143 CCNA1P78396 465 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDPN-210ENST00000513143 MCF2L2Q86YR7 1114 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 OXER1Q8TDS5 423 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 CFHR5Q9BXR6 569 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 MAF1Q9H063 256 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 FOXP1Q9H334 677 aaPredicted RBP14.38□□□□□ -0.11
PDPN-210ENST00000513143 ACAD9Q9H845 621 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 HOMER2Q9NSB8 354 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 FBXO40Q9UH90 709 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 CPA4Q9UI42 421 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 KIF28PB7ZC32 967 aa14.37□□□□□ -0.11
PDPN-210ENST00000513143 ERCC3P19447 782 aa14.37□□□□□ -0.11
PDPN-210ENST00000513143 HSD17B4P51659 736 aa14.37□□□□□ -0.11
PDPN-210ENST00000513143 MCTP1Q6DN14 999 aa14.37□□□□□ -0.11
PDPN-210ENST00000513143 TBC1D5Q92609 795 aa14.37□□□□□ -0.11
PDPN-210ENST00000513143 TNFRSF25Q93038 417 aa14.37□□□□□ -0.11
PDPN-210ENST00000513143 MROH8Q9H579 483 aa14.37□□□□□ -0.11
PDPN-210ENST00000513143 MAP3K20Q9NYL2 800 aaKnown RBP14.37□□□□□ -0.11
PDPN-210ENST00000513143 MYH15Q9Y2K3 1946 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 GCOM1H8Y6P7 765 aaPredicted RBP14.36□□□□□ -0.11
PDPN-210ENST00000513143 F13A1P00488 732 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 CFBP00751 764 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 POLR2MP0CAP2 368 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 RESTQ13127 1097 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 NR5A1Q13285 461 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 UBE2SQ16763 222 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 MCTP2Q6DN12 878 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 USP17L6PQ6QN14 398 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 FERMT3Q86UX7 667 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 NCAPG2Q86XI2 1143 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 REXO1Q8N1G1 1221 aaKnown RBP14.36□□□□□ -0.11
PDPN-210ENST00000513143 PORCNQ9H237 461 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 R3HDMLQ9H3Y0 253 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 ZSCAN16Q9H4T2 348 aaPredicted RBP14.36□□□□□ -0.11
PDPN-210ENST00000513143 BIN2Q9UBW5 565 aaPredicted RBP14.36□□□□□ -0.11
PDPN-210ENST00000513143 PCDHA6Q9UN73 950 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 PCDHA8Q9Y5H6 950 aa14.36□□□□□ -0.11
PDPN-210ENST00000513143 AP3B2Q13367 1082 aa14.35□□□□□ -0.11
PDPN-210ENST00000513143 GNL2Q13823 731 aaKnown RBP14.35□□□□□ -0.11
PDPN-210ENST00000513143 FOXD4L5Q5VV16 416 aaPredicted RBP14.35□□□□□ -0.11
PDPN-210ENST00000513143 RNF207Q6ZRF8 634 aa14.35□□□□□ -0.11
PDPN-210ENST00000513143 BRAPQ7Z569 592 aa14.35□□□□□ -0.11
PDPN-210ENST00000513143 NOSTRINQ8IVI9 506 aa14.35□□□□□ -0.11
PDPN-210ENST00000513143 RASGRP4Q8TDF6 673 aa14.35□□□□□ -0.11
PDPN-210ENST00000513143 FOXD4L4Q8WXT5 416 aaPredicted RBP14.35□□□□□ -0.11
PDPN-210ENST00000513143 TMEM260Q9NX78 707 aa14.35□□□□□ -0.11
PDPN-210ENST00000513143 RNF186Q9NXI6 227 aa14.35□□□□□ -0.11
PDPN-210ENST00000513143 PLXNB2O15031 1838 aa14.35□□□□□ -0.11
PDPN-210ENST00000513143 MGAMO43451 1857 aa14.34□□□□□ -0.11
PDPN-210ENST00000513143 DOCK3Q8IZD9 2030 aa14.34□□□□□ -0.11
PDPN-210ENST00000513143 MYH7BA7E2Y1 1941 aa14.34□□□□□ -0.11
PDPN-210ENST00000513143 LCTP09848 1927 aa14.34□□□□□ -0.11
PDPN-210ENST00000513143 FOSP01100 380 aaPredicted RBP14.34□□□□□ -0.11
PDPN-210ENST00000513143 HOXA13P31271 388 aaPredicted RBP14.34□□□□□ -0.11
PDPN-210ENST00000513143 RPS6P62753 249 aaKnown RBP14.34□□□□□ -0.11
PDPN-210ENST00000513143 BAATQ14032 418 aaPredicted RBP14.34□□□□□ -0.11
PDPN-210ENST00000513143 EARS2Q5JPH6 523 aaKnown RBP14.34□□□□□ -0.11
PDPN-210ENST00000513143 JAKMIP3Q5VZ66 844 aa14.34□□□□□ -0.11
PDPN-210ENST00000513143 NSMFQ6X4W1 530 aa14.34□□□□□ -0.11
PDPN-210ENST00000513143 KRT25Q7Z3Z0 450 aa14.34□□□□□ -0.11
PDPN-210ENST00000513143 SPDYE1Q8NFV5 336 aaPredicted RBP14.34□□□□□ -0.11
PDPN-210ENST00000513143 EFCC1Q9HA90 598 aa14.34□□□□□ -0.11
PDPN-210ENST00000513143 A1CFQ9NQ94 594 aaKnown RBP14.34□□□□□ -0.11
PDPN-210ENST00000513143 CYP39A1Q9NYL5 469 aa14.34□□□□□ -0.11
PDPN-210ENST00000513143 SSUH2Q9Y2M2 353 aa14.34□□□□□ -0.11
PDPN-210ENST00000513143 TCHHQ07283 1943 aa14.33□□□□□ -0.11
PDPN-210ENST00000513143 PFASO15067 1338 aa14.33□□□□□ -0.11
PDPN-210ENST00000513143 TRPA1O75762 1119 aa14.33□□□□□ -0.12
PDPN-210ENST00000513143 TBC1D8O95759 1140 aa14.33□□□□□ -0.12
PDPN-210ENST00000513143 MAPK4P31152 587 aa14.33□□□□□ -0.12
PDPN-210ENST00000513143 NOM1Q5C9Z4 860 aaKnown RBP14.33□□□□□ -0.12
PDPN-210ENST00000513143 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.12
PDPN-210ENST00000513143 PIK3AP1Q6ZUJ8 805 aa14.33□□□□□ -0.12
PDPN-210ENST00000513143 CCAR1Q8IX12 1150 aaKnown RBP14.33□□□□□ -0.12
PDPN-210ENST00000513143 ANKRD35Q8N283 1001 aa14.33□□□□□ -0.12
PDPN-210ENST00000513143 DNAJC5GQ8N7S2 189 aa14.33□□□□□ -0.12
PDPN-210ENST00000513143 SYTL5Q8TDW5 730 aaPredicted RBP14.33□□□□□ -0.12
PDPN-210ENST00000513143 CCDC194A0A1B0GVG4 234 aa14.32□□□□□ -0.12
PDPN-210ENST00000513143 SPDYE3A6NKU9 549 aa14.32□□□□□ -0.12
PDPN-210ENST00000513143 STRNO43815 780 aa14.32□□□□□ -0.12
PDPN-210ENST00000513143 FCER1AP12319 257 aa14.32□□□□□ -0.12
PDPN-210ENST00000513143 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
PDPN-210ENST00000513143 MAP2K1Q02750 393 aaPredicted RBP14.32□□□□□ -0.12
PDPN-210ENST00000513143 NONOQ15233 471 aaKnown RBP eCLIP14.32□□□□□ -0.12
PDPN-210ENST00000513143 GPR142Q7Z601 462 aa14.32□□□□□ -0.12
PDPN-210ENST00000513143 FCHSD1Q86WN1 690 aa14.32□□□□□ -0.12
PDPN-210ENST00000513143 ABRAQ8N0Z2 381 aa14.32□□□□□ -0.12
PDPN-210ENST00000513143 MMP19Q99542 508 aa14.32□□□□□ -0.12
PDPN-210ENST00000513143 ANO3Q9BYT9 981 aa14.32□□□□□ -0.12
PDPN-210ENST00000513143 SAGE1Q9NXZ1 904 aa14.32□□□□□ -0.12
PDPN-210ENST00000513143 COL20A1Q9P218 1284 aa14.32□□□□□ -0.12
PDPN-210ENST00000513143 ZNF236Q9UL36 1845 aa14.31□□□□□ -0.12
PDPN-210ENST00000513143 PLXNA1Q9UIW2 1896 aa14.31□□□□□ -0.12
PDPN-210ENST00000513143 PCNTO95613 3336 aa14.31□□□□□ -0.12
PDPN-210ENST00000513143 DNAJC25-GNG10A0A024R161 153 aa14.31□□□□□ -0.12
PDPN-210ENST00000513143 FAM205CA6NFA0 338 aa14.31□□□□□ -0.12
PDPN-210ENST00000513143 KCTD2Q14681 263 aa14.31□□□□□ -0.12
PDPN-210ENST00000513143 WDR78Q5VTH9 848 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms