RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 SLC39A5Q6ZMH5 540 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.57□□□□□ -1.2
KDM3B-208ENST00000512928 FBXO11Q86XK2 927 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 STAG2Q8N3U4 1231 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 CLEC4DQ8WXI8 215 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 FAM161BQ96MY7 647 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 MYL10Q9BUA6 226 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 LSG1Q9H089 658 aaKnown RBP7.57□□□□□ -1.2
KDM3B-208ENST00000512928 AP5M1Q9H0R1 490 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 JMJD4Q9H9V9 463 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 SENP2Q9HC62 589 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 STARD7Q9NQZ5 370 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 PDGFCQ9NRA1 345 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 LTBP2Q14767 1821 aa7.57□□□□□ -1.2
KDM3B-208ENST00000512928 ASTN1O14525 1302 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 ADCY6O43306 1168 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 ADAMTS4O75173 837 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 CFBP00751 764 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 PTGS1P23219 599 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 MCM5P33992 734 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 ALDH5A1P51649 535 aaPredicted RBP7.56□□□□□ -1.2
KDM3B-208ENST00000512928 ANTXR2P58335 489 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 GRM4Q14833 912 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 KCNA10Q16322 511 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 TLK2Q86UE8 772 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 MCF2L2Q86YR7 1114 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 RAB11FIP4Q86YS3 637 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 MB21D2Q8IYB1 491 aaPredicted RBP7.56□□□□□ -1.2
KDM3B-208ENST00000512928 DEFB123Q8N688 67 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 PCSK9Q8NBP7 692 aaKnown RBP7.56□□□□□ -1.2
KDM3B-208ENST00000512928 CTCFLQ8NI51 663 aaPredicted RBP7.56□□□□□ -1.2
KDM3B-208ENST00000512928 GLT1D1Q96MS3 346 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 PIGSQ96S52 555 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 GDF15Q99988 308 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 AMNQ9BXJ7 453 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 LRRC2Q9BYS8 371 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 UBE2OQ9C0C9 1292 aaKnown RBP7.56□□□□□ -1.2
KDM3B-208ENST00000512928 GPHNQ9NQX3 736 aaPredicted RBP7.56□□□□□ -1.2
KDM3B-208ENST00000512928 MAD2L2Q9UI95 211 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 NAP1L2Q9ULW6 460 aaPredicted RBP7.56□□□□□ -1.2
KDM3B-208ENST00000512928 PHF24Q9UPV7 400 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 MRPL11Q9Y3B7 192 aaKnown RBP7.56□□□□□ -1.2
KDM3B-208ENST00000512928 DNAH12Q6ZR08 3092 aa7.56□□□□□ -1.2
KDM3B-208ENST00000512928 LRRC37A2A6NM11 1700 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 MOXD2PA6NHM9 499 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 B4DLN1 442 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 ZBTB5O15062 677 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 DYNC1LI2O43237 492 aaPredicted RBP7.55□□□□□ -1.2
KDM3B-208ENST00000512928 ASGR1P07306 291 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 SMPD1P17405 629 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 RXRAP19793 462 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 KIF5BP33176 963 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 MRPL12P52815 198 aaKnown RBP7.55□□□□□ -1.2
KDM3B-208ENST00000512928 GJA9P57773 515 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 CHMP4BP1P59074 171 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 FGD1P98174 961 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 TLE2Q04725 743 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 TMEM63BQ5T3F8 832 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 ARHGEF16Q5VV41 709 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 ZNF654Q8IZM8 581 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 TBC1D5Q92609 795 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 WDR11Q9BZH6 1224 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 KATNBL1Q9H079 304 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 LY9Q9HBG7 655 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 VTA1Q9NP79 307 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 PCDHA1Q9Y5I3 950 aa7.55□□□□□ -1.2
KDM3B-208ENST00000512928 MCM3APO60318 1980 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 PALM3A6NDB9 673 aaPredicted RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 DCDC2CA8MYV0 355 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 RBAK-RBAKDNI3L0D1 243 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 SH2B2O14492 632 aaPredicted RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 ZEB2O60315 1214 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 PPP1R11O60927 126 aaPredicted RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 DDAH1O94760 285 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 MYL3P08590 195 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 CLTBP09497 229 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 EIF2AK2P19525 551 aaKnown RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 HOXA13P31271 388 aaPredicted RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 TROAPQ12815 778 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 PPP2R5BQ15173 497 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 NECTIN1Q15223 517 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 FSCN1Q16658 493 aaKnown RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 IQSEC1Q6DN90 963 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 TAPT1Q6NXT6 567 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 CXCL17Q6UXB2 119 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 SYNE3Q6ZMZ3 975 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 SEPT14Q6ZU15 432 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 MICU3Q86XE3 530 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 CMTR1Q8N1G2 835 aaKnown RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 CCDC82Q8N4S0 544 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 KLHDC9Q8NEP7 349 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 DNERQ8NFT8 737 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 OR6J1Q8NGC5 347 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 SYTL5Q8TDW5 730 aaPredicted RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 IGDCC4Q8TDY8 1250 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 NSUN6Q8TEA1 469 aaKnown RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 RRP36Q96EU6 259 aaKnown RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 TMEM87BQ96K49 555 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 TCEANC2Q96MN5 208 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 NEK1Q96PY6 1258 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms